RNA–Protein interactions for RNA: ENST00000530882.1

SOX13-208, Transcript of SRY-box 13, human

TSL 3

Gene SOX13, Length 769 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX13-208	ENST00000530882	RSPH6A	Q9H0K4	717 aa		29.26	■■■□□ 2.27
SOX13-208	ENST00000530882	ITGB4	P16144	1822 aa		29.26	■■■□□ 2.27
SOX13-208	ENST00000530882	RNMT	O43148	476 aa	Known RBP	29.25	■■■□□ 2.27
SOX13-208	ENST00000530882	FCHSD2	O94868	740 aa		29.24	■■■□□ 2.27
SOX13-208	ENST00000530882	FLAD1	Q8NFF5	587 aa		29.24	■■■□□ 2.27
SOX13-208	ENST00000530882	RBM42	Q9BTD8	480 aa	Known RBP	29.24	■■■□□ 2.27
SOX13-208	ENST00000530882	SLC52A2	Q9HAB3	445 aa		29.24	■■■□□ 2.27
SOX13-208	ENST00000530882	LGR6	Q9HBX8	967 aa		29.23	■■■□□ 2.27
SOX13-208	ENST00000530882	MSH5	O43196	834 aa		29.22	■■■□□ 2.27
SOX13-208	ENST00000530882	PTGER2	P43116	358 aa		29.22	■■■□□ 2.27
SOX13-208	ENST00000530882	GNAT3	A8MTJ3	354 aa		29.21	■■■□□ 2.27
SOX13-208	ENST00000530882	LINC00116	Q8NCU8	138 aa		29.21	■■■□□ 2.27
SOX13-208	ENST00000530882	ITPK1	Q13572	414 aa		29.2	■■■□□ 2.26
SOX13-208	ENST00000530882	MAP3K5	Q99683	1374 aa		29.2	■■■□□ 2.26
SOX13-208	ENST00000530882	COL23A1	Q86Y22	540 aa	Predicted RBP	29.19	■■■□□ 2.26
SOX13-208	ENST00000530882	PTCD1	O75127	700 aa	Known RBP	29.17	■■■□□ 2.26
SOX13-208	ENST00000530882	NEFM	P07197	916 aa		29.17	■■■□□ 2.26
SOX13-208	ENST00000530882	POLD1	P28340	1107 aa		29.17	■■■□□ 2.26
SOX13-208	ENST00000530882	PHACTR3	Q96KR7	559 aa		29.17	■■■□□ 2.26
SOX13-208	ENST00000530882	C5	P01031	1676 aa		29.17	■■■□□ 2.26
SOX13-208	ENST00000530882	SGIP1	Q9BQI5	828 aa		29.16	■■■□□ 2.26
SOX13-208	ENST00000530882	SSFA2	P28290	1259 aa		29.15	■■■□□ 2.26
SOX13-208	ENST00000530882	SLC4A9	Q96Q91	983 aa		29.15	■■■□□ 2.26
SOX13-208	ENST00000530882	MRC1	P22897	1456 aa		29.15	■■■□□ 2.26
SOX13-208	ENST00000530882	MYBBP1A	Q9BQG0	1328 aa	Known RBP	29.15	■■■□□ 2.26
SOX13-208	ENST00000530882	GNPAT	O15228	680 aa		29.14	■■■□□ 2.26
SOX13-208	ENST00000530882	TEF	Q10587	303 aa		29.14	■■■□□ 2.26
SOX13-208	ENST00000530882	PHF14	O94880	888 aa		29.13	■■■□□ 2.25
SOX13-208	ENST00000530882	ARX	Q96QS3	562 aa		29.13	■■■□□ 2.25
SOX13-208	ENST00000530882	C4B	P0C0L5	1744 aa		29.13	■■■□□ 2.25
SOX13-208	ENST00000530882	QSER1	Q2KHR3	1735 aa		29.13	■■■□□ 2.25
SOX13-208	ENST00000530882	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	29.12	■■■□□ 2.25
SOX13-208	ENST00000530882	PNN	Q9H307	717 aa	Known RBP	29.12	■■■□□ 2.25
SOX13-208	ENST00000530882	RC3H1	Q5TC82	1133 aa	Known RBP	29.11	■■■□□ 2.25
SOX13-208	ENST00000530882	IL17RE	Q8NFR9	667 aa		29.11	■■■□□ 2.25
SOX13-208	ENST00000530882	RTF1	Q92541	710 aa	Known RBP	29.11	■■■□□ 2.25
SOX13-208	ENST00000530882	CNTNAP4	Q9C0A0	1308 aa		29.1	■■■□□ 2.25
SOX13-208	ENST00000530882	SCN11A	Q9UI33	1791 aa		29.09	■■■□□ 2.25
SOX13-208	ENST00000530882	SLC39A6	Q13433	755 aa		29.09	■■■□□ 2.25
SOX13-208	ENST00000530882	TTC5	Q8N0Z6	440 aa		29.09	■■■□□ 2.25
SOX13-208	ENST00000530882	RTCB	Q9Y3I0	505 aa	Known RBP	29.09	■■■□□ 2.25
SOX13-208	ENST00000530882	AMIGO3	Q86WK7	504 aa		29.07	■■■□□ 2.24
SOX13-208	ENST00000530882	ADAMTS7	Q9UKP4	1686 aa		29.06	■■■□□ 2.24
SOX13-208	ENST00000530882	CEMIP	Q8WUJ3	1361 aa		29.06	■■■□□ 2.24
SOX13-208	ENST00000530882	HTATSF1	O43719	755 aa	Known RBP	29.06	■■■□□ 2.24
SOX13-208	ENST00000530882	FHDC1	Q9C0D6	1143 aa	Predicted RBP	29.06	■■■□□ 2.24
SOX13-208	ENST00000530882	TAF1L	Q8IZX4	1826 aa		29.06	■■■□□ 2.24
SOX13-208	ENST00000530882	MSL1	Q68DK7	614 aa		29.05	■■■□□ 2.24
SOX13-208	ENST00000530882	PRKRIP1	Q9H875	184 aa	Predicted RBP	29.05	■■■□□ 2.24
SOX13-208	ENST00000530882	MAPK8IP3	Q9UPT6	1336 aa		29.04	■■■□□ 2.24
SOX13-208	ENST00000530882	ZNF316	A6NFI3	1004 aa	Predicted RBP	29.04	■■■□□ 2.24
SOX13-208	ENST00000530882	DCAF8L1	A6NGE4	600 aa		29.04	■■■□□ 2.24
SOX13-208	ENST00000530882	ADRA2B	P18089	450 aa		29.04	■■■□□ 2.24
SOX13-208	ENST00000530882	TRAPPC3L	Q5T215	181 aa		29.04	■■■□□ 2.24
SOX13-208	ENST00000530882	ZNF831	Q5JPB2	1677 aa		29.04	■■■□□ 2.24
SOX13-208	ENST00000530882	TUBGCP6	Q96RT7	1819 aa		29.04	■■■□□ 2.24
SOX13-208	ENST00000530882	RPS6KA4	O75676	772 aa		29.03	■■■□□ 2.24
SOX13-208	ENST00000530882	CRKL	P46109	303 aa	Known RBP	29.03	■■■□□ 2.24
SOX13-208	ENST00000530882	SMIM5	Q71RC9	77 aa		29.03	■■■□□ 2.24
SOX13-208	ENST00000530882	VSIG10	Q8N0Z9	540 aa		29.03	■■■□□ 2.24
SOX13-208	ENST00000530882	SYT17	Q9BSW7	474 aa		29.03	■■■□□ 2.24
SOX13-208	ENST00000530882	PLEKHF1	Q96S99	279 aa		29.02	■■■□□ 2.24
SOX13-208	ENST00000530882	ZNF790	Q6PG37	636 aa		29.01	■■■□□ 2.23
SOX13-208	ENST00000530882	DNAJC10	Q8IXB1	793 aa		29.01	■■■□□ 2.23
SOX13-208	ENST00000530882	BTBD11	A6QL63	1104 aa		28.99	■■■□□ 2.23
SOX13-208	ENST00000530882	MCM10	Q7L590	875 aa		28.99	■■■□□ 2.23
SOX13-208	ENST00000530882	KLHL34	Q8N239	644 aa		28.98	■■■□□ 2.23
SOX13-208	ENST00000530882	RFC4	P35249	363 aa		28.97	■■■□□ 2.23
SOX13-208	ENST00000530882	WDR43	Q15061	677 aa	Known RBP eCLIP	28.97	■■■□□ 2.23
SOX13-208	ENST00000530882	NFE2L2	Q16236	605 aa		28.97	■■■□□ 2.23
SOX13-208	ENST00000530882	ARHGEF1	Q92888	912 aa	Known RBP	28.97	■■■□□ 2.23
SOX13-208	ENST00000530882	CCDC87	Q9NVE4	849 aa		28.97	■■■□□ 2.23
SOX13-208	ENST00000530882	KCP	Q6ZWJ8	1503 aa		28.97	■■■□□ 2.23
SOX13-208	ENST00000530882	FMNL2	Q96PY5	1086 aa		28.96	■■■□□ 2.23
SOX13-208	ENST00000530882	CYP19A1	P11511	503 aa	Predicted RBP	28.95	■■■□□ 2.22
SOX13-208	ENST00000530882	DCTN1	Q14203	1278 aa		28.95	■■■□□ 2.22
SOX13-208	ENST00000530882	INTS5	Q6P9B9	1019 aa	Known RBP	28.95	■■■□□ 2.22
SOX13-208	ENST00000530882	ZNF496	Q96IT1	587 aa	Predicted RBP	28.95	■■■□□ 2.22
SOX13-208	ENST00000530882	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.95	■■■□□ 2.22
SOX13-208	ENST00000530882	UBR3	Q6ZT12	1888 aa		28.95	■■■□□ 2.22
SOX13-208	ENST00000530882	STARD3NL	O95772	234 aa		28.94	■■■□□ 2.22
SOX13-208	ENST00000530882	HEG1	Q9ULI3	1381 aa		28.93	■■■□□ 2.22
SOX13-208	ENST00000530882	NLGN1	Q8N2Q7	840 aa		28.93	■■■□□ 2.22
SOX13-208	ENST00000530882	CIC	Q96RK0	1608 aa	Predicted RBP	28.93	■■■□□ 2.22
SOX13-208	ENST00000530882	COL5A3	P25940	1745 aa	Predicted RBP	28.91	■■■□□ 2.22
SOX13-208	ENST00000530882	TAF7	Q15545	349 aa	Predicted RBP	28.91	■■■□□ 2.22
SOX13-208	ENST00000530882	COL24A1	Q17RW2	1714 aa		28.91	■■■□□ 2.22
SOX13-208	ENST00000530882	TJP1	Q07157	1748 aa		28.89	■■■□□ 2.22
SOX13-208	ENST00000530882	PNISR	Q8TF01	805 aa	Known RBP	28.89	■■■□□ 2.22
SOX13-208	ENST00000530882	SOS1	Q07889	1333 aa	Predicted RBP	28.89	■■■□□ 2.21
SOX13-208	ENST00000530882	KCNQ3	O43525	872 aa		28.88	■■■□□ 2.21
SOX13-208	ENST00000530882	ZBTB1	Q9Y2K1	713 aa		28.88	■■■□□ 2.21
SOX13-208	ENST00000530882	GYS1	P13807	737 aa		28.87	■■■□□ 2.21
SOX13-208	ENST00000530882	CD2AP	Q9Y5K6	639 aa		28.87	■■■□□ 2.21
SOX13-208	ENST00000530882	MMP10	P09238	476 aa		28.86	■■■□□ 2.21
SOX13-208	ENST00000530882	RIPK4	P57078	832 aa		28.86	■■■□□ 2.21
SOX13-208	ENST00000530882	LMOD3	Q0VAK6	560 aa		28.86	■■■□□ 2.21
SOX13-208	ENST00000530882	USP42	Q9H9J4	1324 aa	Known RBP	28.86	■■■□□ 2.21
SOX13-208	ENST00000530882	ZPR1	O75312	459 aa		28.85	■■■□□ 2.21
SOX13-208	ENST00000530882	RUNDC1	Q96C34	613 aa		28.85	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms