RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ZBTB7BO15156 539 aaPredicted RBP13.89□□□□□ -0.19
CSDE1-213ENST00000530784 SERTAD1Q9UHV2 236 aa13.89□□□□□ -0.19
CSDE1-213ENST00000530784 LMOD1P29536 600 aaPredicted RBP13.88□□□□□ -0.19
CSDE1-213ENST00000530784 TLR1Q15399 786 aa13.88□□□□□ -0.19
CSDE1-213ENST00000530784 NBPF10Q6P3W6 841 aaKnown RBP13.88□□□□□ -0.19
CSDE1-213ENST00000530784 NBPF15Q8N660 670 aa13.88□□□□□ -0.19
CSDE1-213ENST00000530784 KIAA1024Q9UPX6 916 aa13.88□□□□□ -0.19
CSDE1-213ENST00000530784 SPATA31C2B4DYI2 1134 aa13.87□□□□□ -0.19
CSDE1-213ENST00000530784 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
CSDE1-213ENST00000530784 ATP1A2P50993 1020 aa13.86□□□□□ -0.19
CSDE1-213ENST00000530784 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
CSDE1-213ENST00000530784 DNAAF2Q9NVR5 837 aaKnown RBP13.86□□□□□ -0.19
CSDE1-213ENST00000530784 ARID3CA6NKF2 412 aa13.85□□□□□ -0.19
CSDE1-213ENST00000530784 SMTNP53814 917 aa13.85□□□□□ -0.19
CSDE1-213ENST00000530784 CFAP70Q5T0N1 1121 aa13.85□□□□□ -0.19
CSDE1-213ENST00000530784 TMEM214Q6NUQ4 689 aaKnown RBP13.85□□□□□ -0.19
CSDE1-213ENST00000530784 ERBB4Q15303 1308 aa13.85□□□□□ -0.19
CSDE1-213ENST00000530784 CCDC102BQ68D86 513 aa13.84□□□□□ -0.19
CSDE1-213ENST00000530784 TAS1R3Q7RTX0 852 aa13.84□□□□□ -0.19
CSDE1-213ENST00000530784 TPCN2Q8NHX9 752 aa13.84□□□□□ -0.19
CSDE1-213ENST00000530784 SLC4A9Q96Q91 983 aa13.84□□□□□ -0.19
CSDE1-213ENST00000530784 ZNF358Q9NW07 568 aa13.84□□□□□ -0.19
CSDE1-213ENST00000530784 GTF2E1P29083 439 aaPredicted RBP13.83□□□□□ -0.2
CSDE1-213ENST00000530784 KANK4Q5T7N3 995 aaPredicted RBP13.83□□□□□ -0.2
CSDE1-213ENST00000530784 PPARGC1BQ86YN6 1023 aaKnown RBP13.83□□□□□ -0.2
CSDE1-213ENST00000530784 IRF7Q92985 503 aa13.83□□□□□ -0.2
CSDE1-213ENST00000530784 RASA1P20936 1047 aa13.82□□□□□ -0.2
CSDE1-213ENST00000530784 ITGA6P23229 1130 aa13.82□□□□□ -0.2
CSDE1-213ENST00000530784 PHKA2P46019 1235 aa13.82□□□□□ -0.2
CSDE1-213ENST00000530784 WDR44Q5JSH3 913 aa13.82□□□□□ -0.2
CSDE1-213ENST00000530784 GNASQ5JWF2 1037 aa13.82□□□□□ -0.2
CSDE1-213ENST00000530784 LARGE2Q8N3Y3 721 aa13.82□□□□□ -0.2
CSDE1-213ENST00000530784 ZNF594Q96JF6 807 aaPredicted RBP13.82□□□□□ -0.2
CSDE1-213ENST00000530784 C4orf17Q53FE4 359 aa13.81□□□□□ -0.2
CSDE1-213ENST00000530784 TIMMDC1Q9NPL8 285 aa13.81□□□□□ -0.2
CSDE1-213ENST00000530784 A6NJY4 79 aa13.8□□□□□ -0.2
CSDE1-213ENST00000530784 BACH1O14867 736 aa13.8□□□□□ -0.2
CSDE1-213ENST00000530784 RFX1P22670 979 aa13.8□□□□□ -0.2
CSDE1-213ENST00000530784 MTFR1Q15390 333 aa13.8□□□□□ -0.2
CSDE1-213ENST00000530784 VRTNQ9H8Y1 702 aa13.8□□□□□ -0.2
CSDE1-213ENST00000530784 DYRK1BQ9Y463 629 aa13.8□□□□□ -0.2
CSDE1-213ENST00000530784 DKK1O94907 266 aa13.79□□□□□ -0.2
CSDE1-213ENST00000530784 RHBDD1Q8TEB9 315 aa13.79□□□□□ -0.2
CSDE1-213ENST00000530784 CUEDC1Q9NWM3 386 aaPredicted RBP13.79□□□□□ -0.2
CSDE1-213ENST00000530784 VSIG8P0DPA2 414 aa13.78□□□□□ -0.2
CSDE1-213ENST00000530784 CRTC2Q53ET0 693 aaPredicted RBP13.78□□□□□ -0.2
CSDE1-213ENST00000530784 SIX5Q8N196 739 aa13.78□□□□□ -0.2
CSDE1-213ENST00000530784 GAS2L1Q99501 681 aaPredicted RBP13.78□□□□□ -0.2
CSDE1-213ENST00000530784 IQSEC3Q9UPP2 1182 aaPredicted RBP13.78□□□□□ -0.2
CSDE1-213ENST00000530784 USP3Q9Y6I4 520 aa13.78□□□□□ -0.2
CSDE1-213ENST00000530784 CDK2AP1O14519 115 aa13.77□□□□□ -0.21
CSDE1-213ENST00000530784 LARP1Q6PKG0 1096 aaKnown RBP13.77□□□□□ -0.21
CSDE1-213ENST00000530784 VWA5B2Q8N398 1253 aa13.77□□□□□ -0.21
CSDE1-213ENST00000530784 SFI1A8K8P3 1242 aa13.76□□□□□ -0.21
CSDE1-213ENST00000530784 GMPRP36959 345 aa13.76□□□□□ -0.21
CSDE1-213ENST00000530784 CDCA8Q53HL2 280 aa13.76□□□□□ -0.21
CSDE1-213ENST00000530784 RIPOR1Q6ZS17 1223 aa13.76□□□□□ -0.21
CSDE1-213ENST00000530784 TNS4Q8IZW8 715 aa13.76□□□□□ -0.21
CSDE1-213ENST00000530784 NANOS1Q8WY41 292 aaKnown RBP13.76□□□□□ -0.21
CSDE1-213ENST00000530784 CDC14CA4D256 554 aa13.75□□□□□ -0.21
CSDE1-213ENST00000530784 PTK7Q13308 1070 aa13.75□□□□□ -0.21
CSDE1-213ENST00000530784 ZNF295-AS1Q8N0V1 137 aa13.75□□□□□ -0.21
CSDE1-213ENST00000530784 GPR161Q8N6U8 529 aaKnown RBP13.75□□□□□ -0.21
CSDE1-213ENST00000530784 SCHIP1Q9P0W5 487 aaPredicted RBP13.75□□□□□ -0.21
CSDE1-213ENST00000530784 EPHA4P54764 986 aa13.74□□□□□ -0.21
CSDE1-213ENST00000530784 NIFKQ9BYG3 293 aaKnown RBP13.74□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L10C9JJH3 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L12C9JPN9 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L21D6R901 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L22D6RA61 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L17D6RBQ6 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L19D6RCP7 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L20D6RJB6 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 PLA2G4AP47712 749 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 USP17L24Q0WX57 530 aa13.73□□□□□ -0.21
CSDE1-213ENST00000530784 CCDC97Q96F63 343 aaPredicted RBP13.73□□□□□ -0.21
CSDE1-213ENST00000530784 RBM19Q9Y4C8 960 aaKnown RBP13.73□□□□□ -0.21
CSDE1-213ENST00000530784 FAM196BA6NMK8 535 aa13.72□□□□□ -0.21
CSDE1-213ENST00000530784 F11P03951 625 aa13.72□□□□□ -0.21
CSDE1-213ENST00000530784 DBN1Q16643 649 aa13.72□□□□□ -0.21
CSDE1-213ENST00000530784 SV2AQ7L0J3 742 aa13.72□□□□□ -0.21
CSDE1-213ENST00000530784 TSEN2Q8NCE0 465 aaKnown RBP13.72□□□□□ -0.21
CSDE1-213ENST00000530784 SERPINA10Q9UK55 444 aa13.72□□□□□ -0.21
CSDE1-213ENST00000530784 A0A1B0GTH6 734 aa13.71□□□□□ -0.21
CSDE1-213ENST00000530784 FOXK2Q01167 660 aa13.71□□□□□ -0.21
CSDE1-213ENST00000530784 DPYDQ12882 1025 aa13.71□□□□□ -0.21
CSDE1-213ENST00000530784 TBCELQ5QJ74 424 aa13.71□□□□□ -0.21
CSDE1-213ENST00000530784 TRIM22Q8IYM9 498 aa13.71□□□□□ -0.21
CSDE1-213ENST00000530784 C1orf115Q9H7X2 142 aa13.71□□□□□ -0.21
CSDE1-213ENST00000530784 GPAMQ9HCL2 828 aa13.71□□□□□ -0.21
CSDE1-213ENST00000530784 M0R2N6 131 aa13.7□□□□□ -0.22
CSDE1-213ENST00000530784 WIPF1O43516 503 aa13.7□□□□□ -0.22
CSDE1-213ENST00000530784 SEC13P55735 322 aa13.7□□□□□ -0.22
CSDE1-213ENST00000530784 CABP1Q9NZU7 370 aa13.7□□□□□ -0.22
CSDE1-213ENST00000530784 MSX1P28360 303 aa13.69□□□□□ -0.22
CSDE1-213ENST00000530784 ANKMY2Q8IV38 441 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms