RNA–Protein interactions for RNA: ENST00000530470.1

TRIM29-215, Transcript of tripartite motif containing 29, humanhuman

TSL 2

Gene TRIM29, Length 771 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-215ENST00000530470 AK7Q96M32 723 aa15.98■□□□□ 0.15
TRIM29-215ENST00000530470 ATG3Q9NT62 314 aa15.98■□□□□ 0.15
TRIM29-215ENST00000530470 KDM6AO15550 1401 aaPredicted RBP15.97■□□□□ 0.15
TRIM29-215ENST00000530470 NPC1L1Q9UHC9 1359 aa15.97■□□□□ 0.15
TRIM29-215ENST00000530470 YY1P25490 414 aa15.96■□□□□ 0.15
TRIM29-215ENST00000530470 C1orf141Q5JVX7 400 aa15.96■□□□□ 0.15
TRIM29-215ENST00000530470 KLHL34Q8N239 644 aa15.96■□□□□ 0.15
TRIM29-215ENST00000530470 UBR3Q6ZT12 1888 aa15.95■□□□□ 0.14
TRIM29-215ENST00000530470 ATP6V1AP38606 617 aa15.95■□□□□ 0.14
TRIM29-215ENST00000530470 ITPK1Q13572 414 aa15.95■□□□□ 0.14
TRIM29-215ENST00000530470 MSL1Q68DK7 614 aa15.95■□□□□ 0.14
TRIM29-215ENST00000530470 LINC00116Q8NCU8 138 aa15.95■□□□□ 0.14
TRIM29-215ENST00000530470 CABP4P57796 275 aa15.94■□□□□ 0.14
TRIM29-215ENST00000530470 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
TRIM29-215ENST00000530470 AMIGO3Q86WK7 504 aa15.94■□□□□ 0.14
TRIM29-215ENST00000530470 ZNF831Q5JPB2 1677 aa15.93■□□□□ 0.14
TRIM29-215ENST00000530470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.93■□□□□ 0.14
TRIM29-215ENST00000530470 DIAPH1O60610 1272 aaKnown RBP15.93■□□□□ 0.14
TRIM29-215ENST00000530470 PHF14O94880 888 aa15.93■□□□□ 0.14
TRIM29-215ENST00000530470 HMOX1P09601 288 aa15.92■□□□□ 0.14
TRIM29-215ENST00000530470 SSFA2P28290 1259 aa15.92■□□□□ 0.14
TRIM29-215ENST00000530470 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
TRIM29-215ENST00000530470 RBM42Q9BTD8 480 aaKnown RBP15.92■□□□□ 0.14
TRIM29-215ENST00000530470 SCN11AQ9UI33 1791 aa15.91■□□□□ 0.14
TRIM29-215ENST00000530470 GNPATO15228 680 aa15.91■□□□□ 0.14
TRIM29-215ENST00000530470 AKAP4Q5JQC9 854 aa15.91■□□□□ 0.14
TRIM29-215ENST00000530470 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
TRIM29-215ENST00000530470 NLGN2Q8NFZ4 835 aa15.9■□□□□ 0.14
TRIM29-215ENST00000530470 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
TRIM29-215ENST00000530470 COL5A3P25940 1745 aaPredicted RBP15.9■□□□□ 0.14
TRIM29-215ENST00000530470 COL3A1P02461 1466 aaPredicted RBP15.9■□□□□ 0.14
TRIM29-215ENST00000530470 GPR162Q16538 588 aa15.89■□□□□ 0.13
TRIM29-215ENST00000530470 PPP4R3CPQ6ZMV5 832 aa15.89■□□□□ 0.13
TRIM29-215ENST00000530470 PTCD1O75127 700 aaKnown RBP15.87■□□□□ 0.13
TRIM29-215ENST00000530470 RTCBQ9Y3I0 505 aaKnown RBP15.87■□□□□ 0.13
TRIM29-215ENST00000530470 U2SURPO15042 1029 aaKnown RBP15.86■□□□□ 0.13
TRIM29-215ENST00000530470 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
TRIM29-215ENST00000530470 RC3H1Q5TC82 1133 aaKnown RBP15.86■□□□□ 0.13
TRIM29-215ENST00000530470 PELP1Q8IZL8 1130 aaKnown RBP15.86■□□□□ 0.13
TRIM29-215ENST00000530470 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
TRIM29-215ENST00000530470 CD2APQ9Y5K6 639 aa15.86■□□□□ 0.13
TRIM29-215ENST00000530470 CNTNAP4Q9C0A0 1308 aa15.86■□□□□ 0.13
TRIM29-215ENST00000530470 MRC1P22897 1456 aa15.85■□□□□ 0.13
TRIM29-215ENST00000530470 VIRMAQ69YN4 1812 aaKnown RBP15.85■□□□□ 0.13
TRIM29-215ENST00000530470 UTRNP46939 3433 aa15.85■□□□□ 0.13
TRIM29-215ENST00000530470 RNMTO43148 476 aaKnown RBP15.85■□□□□ 0.13
TRIM29-215ENST00000530470 TRAPPC3LQ5T215 181 aa15.85■□□□□ 0.13
TRIM29-215ENST00000530470 SLC52A2Q9HAB3 445 aa15.85■□□□□ 0.13
TRIM29-215ENST00000530470 CICQ96RK0 1608 aaPredicted RBP15.85■□□□□ 0.13
TRIM29-215ENST00000530470 ADAMTS7Q9UKP4 1686 aa15.85■□□□□ 0.13
TRIM29-215ENST00000530470 TJP1Q07157 1748 aa15.85■□□□□ 0.13
TRIM29-215ENST00000530470 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
TRIM29-215ENST00000530470 CHD4Q14839 1912 aa15.84■□□□□ 0.13
TRIM29-215ENST00000530470 RPS6KA4O75676 772 aa15.83■□□□□ 0.12
TRIM29-215ENST00000530470 ARHGEF1Q92888 912 aaKnown RBP15.82■□□□□ 0.12
TRIM29-215ENST00000530470 C4AP0C0L4 1744 aa15.81■□□□□ 0.12
TRIM29-215ENST00000530470 PPP2R1AP30153 589 aa15.81■□□□□ 0.12
TRIM29-215ENST00000530470 RFC4P35249 363 aa15.81■□□□□ 0.12
TRIM29-215ENST00000530470 CRKLP46109 303 aaKnown RBP15.81■□□□□ 0.12
TRIM29-215ENST00000530470 C1QBPQ07021 282 aaKnown RBP15.81■□□□□ 0.12
TRIM29-215ENST00000530470 MYH14Q7Z406 1995 aaKnown RBP15.81■□□□□ 0.12
TRIM29-215ENST00000530470 MMP10P09238 476 aa15.8■□□□□ 0.12
TRIM29-215ENST00000530470 YBX3P16989 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRIM29-215ENST00000530470 SLC39A6Q13433 755 aa15.8■□□□□ 0.12
TRIM29-215ENST00000530470 NLGN1Q8N2Q7 840 aa15.8■□□□□ 0.12
TRIM29-215ENST00000530470 GAS2L2Q8NHY3 880 aa15.8■□□□□ 0.12
TRIM29-215ENST00000530470 GOLGB1Q14789 3259 aaKnown RBP15.79■□□□□ 0.12
TRIM29-215ENST00000530470 KCPQ6ZWJ8 1503 aa15.79■□□□□ 0.12
TRIM29-215ENST00000530470 GRIN3BO60391 1043 aa15.79■□□□□ 0.12
TRIM29-215ENST00000530470 ZNF784Q8NCA9 323 aaPredicted RBP15.79■□□□□ 0.12
TRIM29-215ENST00000530470 NUDCQ9Y266 331 aa15.79■□□□□ 0.12
TRIM29-215ENST00000530470 GNAT3A8MTJ3 354 aa15.78■□□□□ 0.12
TRIM29-215ENST00000530470 GYS1P13807 737 aa15.78■□□□□ 0.12
TRIM29-215ENST00000530470 DNAJC10Q8IXB1 793 aa15.78■□□□□ 0.12
TRIM29-215ENST00000530470 PRKAR2BP31323 418 aa15.77■□□□□ 0.12
TRIM29-215ENST00000530470 INTS5Q6P9B9 1019 aaKnown RBP15.77■□□□□ 0.12
TRIM29-215ENST00000530470 RSPH6AQ9H0K4 717 aa15.77■□□□□ 0.12
TRIM29-215ENST00000530470 UBR2Q8IWV8 1755 aa15.77■□□□□ 0.11
TRIM29-215ENST00000530470 U2AF1L5P0DN76 240 aaPredicted RBP15.76■□□□□ 0.11
TRIM29-215ENST00000530470 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
TRIM29-215ENST00000530470 U2AF1Q01081 240 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRIM29-215ENST00000530470 TEFQ10587 303 aa15.76■□□□□ 0.11
TRIM29-215ENST00000530470 IL17REQ8NFR9 667 aa15.76■□□□□ 0.11
TRIM29-215ENST00000530470 PHACTR3Q96KR7 559 aa15.76■□□□□ 0.11
TRIM29-215ENST00000530470 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
TRIM29-215ENST00000530470 KIF13BQ9NQT8 1826 aa15.75■□□□□ 0.11
TRIM29-215ENST00000530470 SIPA1L3O60292 1781 aaPredicted RBP15.75■□□□□ 0.11
TRIM29-215ENST00000530470 TTC5Q8N0Z6 440 aa15.75■□□□□ 0.11
TRIM29-215ENST00000530470 VSIG10Q8N0Z9 540 aa15.75■□□□□ 0.11
TRIM29-215ENST00000530470 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
TRIM29-215ENST00000530470 USP42Q9H9J4 1324 aaKnown RBP15.74■□□□□ 0.11
TRIM29-215ENST00000530470 PARP3Q9Y6F1 533 aa15.74■□□□□ 0.11
TRIM29-215ENST00000530470 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
TRIM29-215ENST00000530470 CNKSR2Q8WXI2 1034 aa15.73■□□□□ 0.11
TRIM29-215ENST00000530470 RNF216Q9NWF9 866 aaPredicted RBP15.73■□□□□ 0.11
TRIM29-215ENST00000530470 WWC3Q9ULE0 1092 aa15.73■□□□□ 0.11
TRIM29-215ENST00000530470 C10orf71Q711Q0 1435 aa15.73■□□□□ 0.11
TRIM29-215ENST00000530470 KIAA1551Q9HCM1 1747 aa15.73■□□□□ 0.11
TRIM29-215ENST00000530470 CEMIPQ8WUJ3 1361 aa15.73■□□□□ 0.11
TRIM29-215ENST00000530470 PXDNLA1KZ92 1463 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms