RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 PRMT3O60678 531 aa10.84□□□□□ -0.67
CASP4-208ENST00000530309 PHLDB3Q6NSJ2 640 aa10.84□□□□□ -0.67
CASP4-208ENST00000530309 LGR5O75473 907 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 IL2RAP01589 272 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 RELBQ01201 579 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 CLN3Q13286 438 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 OCLNQ16625 522 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 TNS4Q8IZW8 715 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 MEIOBQ8N635 442 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 CNKSR1Q969H4 720 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 PRIMPOLQ96LW4 560 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 ESYT1Q9BSJ8 1104 aa10.83□□□□□ -0.68
CASP4-208ENST00000530309 CAPN5O15484 640 aaPredicted RBP10.82□□□□□ -0.68
CASP4-208ENST00000530309 WEE1P30291 646 aa10.82□□□□□ -0.68
CASP4-208ENST00000530309 SMTNP53814 917 aa10.81□□□□□ -0.68
CASP4-208ENST00000530309 EPHA4P54764 986 aa10.81□□□□□ -0.68
CASP4-208ENST00000530309 CXXC1Q9P0U4 656 aaPredicted RBP10.81□□□□□ -0.68
CASP4-208ENST00000530309 HRH3Q9Y5N1 445 aa10.81□□□□□ -0.68
CASP4-208ENST00000530309 FAM187AA6NFU0 413 aa10.8□□□□□ -0.68
CASP4-208ENST00000530309 A6NJY4 79 aa10.8□□□□□ -0.68
CASP4-208ENST00000530309 C1orf216Q8TAB5 229 aa10.8□□□□□ -0.68
CASP4-208ENST00000530309 TSEN34Q9BSV6 310 aaKnown RBP10.8□□□□□ -0.68
CASP4-208ENST00000530309 ZNF395Q9H8N7 513 aaPredicted RBP10.8□□□□□ -0.68
CASP4-208ENST00000530309 MEN1O00255 615 aa10.79□□□□□ -0.68
CASP4-208ENST00000530309 MTFR1Q15390 333 aa10.79□□□□□ -0.68
CASP4-208ENST00000530309 NLRP3Q96P20 1036 aa10.79□□□□□ -0.68
CASP4-208ENST00000530309 SCHIP1Q9P0W5 487 aaPredicted RBP10.79□□□□□ -0.68
CASP4-208ENST00000530309 AVPP01185 164 aa10.78□□□□□ -0.68
CASP4-208ENST00000530309 IGFBP4P22692 258 aa10.78□□□□□ -0.68
CASP4-208ENST00000530309 FOXK2Q01167 660 aa10.78□□□□□ -0.68
CASP4-208ENST00000530309 TLR1Q15399 786 aa10.78□□□□□ -0.68
CASP4-208ENST00000530309 TAS1R3Q7RTX0 852 aa10.78□□□□□ -0.68
CASP4-208ENST00000530309 TSPAN10Q9H1Z9 355 aaPredicted RBP10.78□□□□□ -0.68
CASP4-208ENST00000530309 GFRA3O60609 400 aa10.77□□□□□ -0.69
CASP4-208ENST00000530309 UPP2O95045 317 aa10.77□□□□□ -0.69
CASP4-208ENST00000530309 ARID4AP29374 1257 aaPredicted RBP10.77□□□□□ -0.69
CASP4-208ENST00000530309 CENPCQ03188 943 aa10.77□□□□□ -0.69
CASP4-208ENST00000530309 GAS2L2Q8NHY3 880 aa10.77□□□□□ -0.69
CASP4-208ENST00000530309 SCG3Q8WXD2 468 aaKnown RBP10.77□□□□□ -0.69
CASP4-208ENST00000530309 GNEQ9Y223 722 aaKnown RBP10.77□□□□□ -0.69
CASP4-208ENST00000530309 NRG2O14511 850 aaPredicted RBP10.76□□□□□ -0.69
CASP4-208ENST00000530309 CDK2AP1O14519 115 aa10.76□□□□□ -0.69
CASP4-208ENST00000530309 DGAT1O75907 488 aa10.76□□□□□ -0.69
CASP4-208ENST00000530309 TXNDC2Q86VQ3 553 aa10.76□□□□□ -0.69
CASP4-208ENST00000530309 LINC00528Q8N1L1 170 aa10.76□□□□□ -0.69
CASP4-208ENST00000530309 CCER1Q8TC90 406 aaPredicted RBP10.76□□□□□ -0.69
CASP4-208ENST00000530309 FHDC1Q9C0D6 1143 aaPredicted RBP10.76□□□□□ -0.69
CASP4-208ENST00000530309 IVNS1ABPQ9Y6Y0 642 aa10.76□□□□□ -0.69
CASP4-208ENST00000530309 ATAD2Q6PL18 1390 aa10.76□□□□□ -0.69
CASP4-208ENST00000530309 SPINT1O43278 529 aa10.75□□□□□ -0.69
CASP4-208ENST00000530309 C21orf2O43822 256 aa10.75□□□□□ -0.69
CASP4-208ENST00000530309 PKDCCQ504Y2 493 aa10.75□□□□□ -0.69
CASP4-208ENST00000530309 SLC9A9Q8IVB4 645 aa10.75□□□□□ -0.69
CASP4-208ENST00000530309 PODXL2Q9NZ53 605 aa10.75□□□□□ -0.69
CASP4-208ENST00000530309 IQSEC3Q9UPP2 1182 aaPredicted RBP10.74□□□□□ -0.69
CASP4-208ENST00000530309 FOXO3O43524 673 aa10.73□□□□□ -0.69
CASP4-208ENST00000530309 PPP1R12BO60237 982 aaPredicted RBP10.73□□□□□ -0.69
CASP4-208ENST00000530309 GPC1P35052 558 aa10.73□□□□□ -0.69
CASP4-208ENST00000530309 SCNN1AP37088 669 aa10.73□□□□□ -0.69
CASP4-208ENST00000530309 FKBP5Q13451 457 aaPredicted RBP10.73□□□□□ -0.69
CASP4-208ENST00000530309 CTC1Q2NKJ3 1217 aa10.73□□□□□ -0.69
CASP4-208ENST00000530309 TBCELQ5QJ74 424 aa10.73□□□□□ -0.69
CASP4-208ENST00000530309 NBPF15Q8N660 670 aa10.73□□□□□ -0.69
CASP4-208ENST00000530309 PURBQ96QR8 312 aaKnown RBP10.73□□□□□ -0.69
CASP4-208ENST00000530309 INSM2Q96T92 566 aaPredicted RBP10.73□□□□□ -0.69
CASP4-208ENST00000530309 GZF1Q9H116 711 aaPredicted RBP10.73□□□□□ -0.69
CASP4-208ENST00000530309 SMCPP49901 116 aaPredicted RBP10.72□□□□□ -0.69
CASP4-208ENST00000530309 RNF144AP50876 292 aaPredicted RBP10.72□□□□□ -0.69
CASP4-208ENST00000530309 PSMA6P60900 246 aaKnown RBP10.72□□□□□ -0.69
CASP4-208ENST00000530309 MRPL14Q6P1L8 145 aaKnown RBP10.72□□□□□ -0.69
CASP4-208ENST00000530309 CHMP7Q8WUX9 453 aaPredicted RBP10.72□□□□□ -0.69
CASP4-208ENST00000530309 ZSCAN10Q96SZ4 725 aaPredicted RBP10.72□□□□□ -0.69
CASP4-208ENST00000530309 MTMR7Q9Y216 660 aa10.72□□□□□ -0.69
CASP4-208ENST00000530309 USP3Q9Y6I4 520 aa10.72□□□□□ -0.69
CASP4-208ENST00000530309 PTCD1O75127 700 aaKnown RBP10.71□□□□□ -0.69
CASP4-208ENST00000530309 BMP2P12643 396 aa10.71□□□□□ -0.69
CASP4-208ENST00000530309 LAPTM4AQ15012 233 aa10.71□□□□□ -0.69
CASP4-208ENST00000530309 PPARGC1BQ86YN6 1023 aaKnown RBP10.71□□□□□ -0.69
CASP4-208ENST00000530309 STAG2Q8N3U4 1231 aa10.71□□□□□ -0.69
CASP4-208ENST00000530309 COL26A1Q96A83 441 aa10.71□□□□□ -0.69
CASP4-208ENST00000530309 GRIP2Q9C0E4 1043 aa10.71□□□□□ -0.69
CASP4-208ENST00000530309 SLC27A3Q5K4L6 730 aa10.7□□□□□ -0.7
CASP4-208ENST00000530309 C6orf118Q5T5N4 469 aa10.7□□□□□ -0.7
CASP4-208ENST00000530309 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
CASP4-208ENST00000530309 POLMQ9NP87 494 aaPredicted RBP10.7□□□□□ -0.7
CASP4-208ENST00000530309 GTF2E1P29083 439 aaPredicted RBP10.69□□□□□ -0.7
CASP4-208ENST00000530309 CTSOP43234 321 aaPredicted RBP10.69□□□□□ -0.7
CASP4-208ENST00000530309 SCARF1Q14162 830 aa10.69□□□□□ -0.7
CASP4-208ENST00000530309 TMEM214Q6NUQ4 689 aaKnown RBP10.69□□□□□ -0.7
CASP4-208ENST00000530309 ZNF295-AS1Q8N0V1 137 aa10.69□□□□□ -0.7
CASP4-208ENST00000530309 CRIPAKQ8N1N5 446 aa10.69□□□□□ -0.7
CASP4-208ENST00000530309 VTI1AQ96AJ9 217 aa10.69□□□□□ -0.7
CASP4-208ENST00000530309 C2orf49Q9BVC5 232 aaPredicted RBP10.69□□□□□ -0.7
CASP4-208ENST00000530309 CHMP3Q9Y3E7 222 aa10.69□□□□□ -0.7
CASP4-208ENST00000530309 AXIN1O15169 862 aa10.68□□□□□ -0.7
CASP4-208ENST00000530309 TEAD4Q15561 434 aa10.68□□□□□ -0.7
CASP4-208ENST00000530309 FOXD4L5Q5VV16 416 aaPredicted RBP10.68□□□□□ -0.7
CASP4-208ENST00000530309 CAPN12Q6ZSI9 719 aa10.68□□□□□ -0.7
CASP4-208ENST00000530309 NIFKQ9BYG3 293 aaKnown RBP10.68□□□□□ -0.7
CASP4-208ENST00000530309 SERTM1A2A2V5 107 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms