RNA–Protein interactions for RNA: ENST00000530174.1

PCNX3-203, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 1,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-203ENST00000530174 AK7Q96M32 723 aa25.32■■□□□ 1.64
PCNX3-203ENST00000530174 COL24A1Q17RW2 1714 aa25.32■■□□□ 1.64
PCNX3-203ENST00000530174 MSH5O43196 834 aa25.31■■□□□ 1.64
PCNX3-203ENST00000530174 ATP6V1AP38606 617 aa25.31■■□□□ 1.64
PCNX3-203ENST00000530174 MTHFSDQ2M296 383 aaKnown RBP25.31■■□□□ 1.64
PCNX3-203ENST00000530174 NFATC2IPQ8NCF5 419 aa25.3■■□□□ 1.64
PCNX3-203ENST00000530174 ARXQ96QS3 562 aa25.3■■□□□ 1.64
PCNX3-203ENST00000530174 AMIGO3Q86WK7 504 aa25.29■■□□□ 1.64
PCNX3-203ENST00000530174 FHDC1Q9C0D6 1143 aaPredicted RBP25.29■■□□□ 1.64
PCNX3-203ENST00000530174 UBR3Q6ZT12 1888 aa25.29■■□□□ 1.64
PCNX3-203ENST00000530174 FLAD1Q8NFF5 587 aa25.28■■□□□ 1.64
PCNX3-203ENST00000530174 SLC4A9Q96Q91 983 aa25.28■■□□□ 1.64
PCNX3-203ENST00000530174 RBM42Q9BTD8 480 aaKnown RBP25.28■■□□□ 1.64
PCNX3-203ENST00000530174 ZNF831Q5JPB2 1677 aa25.27■■□□□ 1.64
PCNX3-203ENST00000530174 POLD1P28340 1107 aa25.27■■□□□ 1.64
PCNX3-203ENST00000530174 LGR6Q9HBX8 967 aa25.27■■□□□ 1.64
PCNX3-203ENST00000530174 VIRMAQ69YN4 1812 aaKnown RBP25.26■■□□□ 1.63
PCNX3-203ENST00000530174 RNMTO43148 476 aaKnown RBP25.26■■□□□ 1.63
PCNX3-203ENST00000530174 MRC1P22897 1456 aa25.26■■□□□ 1.63
PCNX3-203ENST00000530174 PHF14O94880 888 aa25.25■■□□□ 1.63
PCNX3-203ENST00000530174 SMIM5Q71RC9 77 aa25.25■■□□□ 1.63
PCNX3-203ENST00000530174 SYT17Q9BSW7 474 aa25.25■■□□□ 1.63
PCNX3-203ENST00000530174 SLC52A2Q9HAB3 445 aa25.25■■□□□ 1.63
PCNX3-203ENST00000530174 NUDCQ9Y266 331 aa25.25■■□□□ 1.63
PCNX3-203ENST00000530174 ADAMTS7Q9UKP4 1686 aa25.25■■□□□ 1.63
PCNX3-203ENST00000530174 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.23■■□□□ 1.63
PCNX3-203ENST00000530174 GNPATO15228 680 aa25.23■■□□□ 1.63
PCNX3-203ENST00000530174 MSL1Q68DK7 614 aa25.23■■□□□ 1.63
PCNX3-203ENST00000530174 RSPH6AQ9H0K4 717 aa25.23■■□□□ 1.63
PCNX3-203ENST00000530174 PTCD1O75127 700 aaKnown RBP25.22■■□□□ 1.63
PCNX3-203ENST00000530174 SSFA2P28290 1259 aa25.22■■□□□ 1.63
PCNX3-203ENST00000530174 PRKAR2BP31323 418 aa25.22■■□□□ 1.63
PCNX3-203ENST00000530174 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
PCNX3-203ENST00000530174 COL5A3P25940 1745 aaPredicted RBP25.22■■□□□ 1.63
PCNX3-203ENST00000530174 MAP3K5Q99683 1374 aa25.21■■□□□ 1.63
PCNX3-203ENST00000530174 U2AF1L5P0DN76 240 aaPredicted RBP25.21■■□□□ 1.63
PCNX3-203ENST00000530174 U2AF1Q01081 240 aaKnown RBP eCLIP25.21■■□□□ 1.63
PCNX3-203ENST00000530174 PHACTR3Q96KR7 559 aa25.19■■□□□ 1.62
PCNX3-203ENST00000530174 CNTNAP4Q9C0A0 1308 aa25.18■■□□□ 1.62
PCNX3-203ENST00000530174 DDX10Q13206 875 aaKnown RBP25.18■■□□□ 1.62
PCNX3-203ENST00000530174 KLHL34Q8N239 644 aa25.18■■□□□ 1.62
PCNX3-203ENST00000530174 TJP1Q07157 1748 aa25.17■■□□□ 1.62
PCNX3-203ENST00000530174 CICQ96RK0 1608 aaPredicted RBP25.17■■□□□ 1.62
PCNX3-203ENST00000530174 DCAF8L1A6NGE4 600 aa25.17■■□□□ 1.62
PCNX3-203ENST00000530174 GNAT3A8MTJ3 354 aa25.17■■□□□ 1.62
PCNX3-203ENST00000530174 RC3H1Q5TC82 1133 aaKnown RBP25.17■■□□□ 1.62
PCNX3-203ENST00000530174 SLC39A6Q13433 755 aa25.16■■□□□ 1.62
PCNX3-203ENST00000530174 FCHSD2O94868 740 aa25.15■■□□□ 1.62
PCNX3-203ENST00000530174 RTCBQ9Y3I0 505 aaKnown RBP25.15■■□□□ 1.62
PCNX3-203ENST00000530174 MYH14Q7Z406 1995 aaKnown RBP25.14■■□□□ 1.62
PCNX3-203ENST00000530174 KCPQ6ZWJ8 1503 aa25.14■■□□□ 1.62
PCNX3-203ENST00000530174 IL17REQ8NFR9 667 aa25.14■■□□□ 1.62
PCNX3-203ENST00000530174 RPS6KA4O75676 772 aa25.12■■□□□ 1.61
PCNX3-203ENST00000530174 CRKLP46109 303 aaKnown RBP25.12■■□□□ 1.61
PCNX3-203ENST00000530174 TEFQ10587 303 aa25.11■■□□□ 1.61
PCNX3-203ENST00000530174 RALBP1Q15311 655 aa25.11■■□□□ 1.61
PCNX3-203ENST00000530174 TRAPPC3LQ5T215 181 aa25.11■■□□□ 1.61
PCNX3-203ENST00000530174 SIPA1L3O60292 1781 aaPredicted RBP25.1■■□□□ 1.61
PCNX3-203ENST00000530174 CEMIPQ8WUJ3 1361 aa25.1■■□□□ 1.61
PCNX3-203ENST00000530174 ADRA2BP18089 450 aa25.1■■□□□ 1.61
PCNX3-203ENST00000530174 DNAJC10Q8IXB1 793 aa25.1■■□□□ 1.61
PCNX3-203ENST00000530174 UBR2Q8IWV8 1755 aa25.1■■□□□ 1.61
PCNX3-203ENST00000530174 NLGN2Q8NFZ4 835 aa25.09■■□□□ 1.61
PCNX3-203ENST00000530174 ARHGEF1Q92888 912 aaKnown RBP25.09■■□□□ 1.61
PCNX3-203ENST00000530174 C4AP0C0L4 1744 aa25.07■■□□□ 1.6
PCNX3-203ENST00000530174 TTC5Q8N0Z6 440 aa25.07■■□□□ 1.6
PCNX3-203ENST00000530174 ZEB1P37275 1124 aaPredicted RBP25.06■■□□□ 1.6
PCNX3-203ENST00000530174 INTS5Q6P9B9 1019 aaKnown RBP25.06■■□□□ 1.6
PCNX3-203ENST00000530174 CYP19A1P11511 503 aaPredicted RBP25.05■■□□□ 1.6
PCNX3-203ENST00000530174 RFC4P35249 363 aa25.05■■□□□ 1.6
PCNX3-203ENST00000530174 VSIG10Q8N0Z9 540 aa25.05■■□□□ 1.6
PCNX3-203ENST00000530174 CCDC87Q9NVE4 849 aa25.05■■□□□ 1.6
PCNX3-203ENST00000530174 ZNF790Q6PG37 636 aa25.04■■□□□ 1.6
PCNX3-203ENST00000530174 RTF1Q92541 710 aaKnown RBP25.04■■□□□ 1.6
PCNX3-203ENST00000530174 MCM10Q7L590 875 aa25.03■■□□□ 1.6
PCNX3-203ENST00000530174 CD2APQ9Y5K6 639 aa25.03■■□□□ 1.6
PCNX3-203ENST00000530174 MMP10P09238 476 aa25.02■■□□□ 1.6
PCNX3-203ENST00000530174 GYS1P13807 737 aa25.02■■□□□ 1.6
PCNX3-203ENST00000530174 ZNF496Q96IT1 587 aaPredicted RBP25.02■■□□□ 1.6
PCNX3-203ENST00000530174 MYBBP1AQ9BQG0 1328 aaKnown RBP25.02■■□□□ 1.6
PCNX3-203ENST00000530174 NEFMP07197 916 aa25.01■■□□□ 1.59
PCNX3-203ENST00000530174 NLGN1Q8N2Q7 840 aa25.01■■□□□ 1.59
PCNX3-203ENST00000530174 PLEKHF1Q96S99 279 aa25.01■■□□□ 1.59
PCNX3-203ENST00000530174 BTBD11A6QL63 1104 aa25■■□□□ 1.59
PCNX3-203ENST00000530174 HTATSF1O43719 755 aaKnown RBP25■■□□□ 1.59
PCNX3-203ENST00000530174 YY1P25490 414 aa25■■□□□ 1.59
PCNX3-203ENST00000530174 DCTN1Q14203 1278 aa25■■□□□ 1.59
PCNX3-203ENST00000530174 GPR162Q16538 588 aa25■■□□□ 1.59
PCNX3-203ENST00000530174 SOS1Q07889 1333 aaPredicted RBP25■■□□□ 1.59
PCNX3-203ENST00000530174 HEG1Q9ULI3 1381 aa25■■□□□ 1.59
PCNX3-203ENST00000530174 PELP1Q8IZL8 1130 aaKnown RBP24.99■■□□□ 1.59
PCNX3-203ENST00000530174 SRP68Q9UHB9 627 aaKnown RBP24.99■■□□□ 1.59
PCNX3-203ENST00000530174 ZBTB1Q9Y2K1 713 aa24.99■■□□□ 1.59
PCNX3-203ENST00000530174 USP42Q9H9J4 1324 aaKnown RBP24.98■■□□□ 1.59
PCNX3-203ENST00000530174 KCNQ3O43525 872 aa24.98■■□□□ 1.59
PCNX3-203ENST00000530174 DLG5Q8TDM6 1919 aa24.97■■□□□ 1.59
PCNX3-203ENST00000530174 FMNL2Q96PY5 1086 aa24.97■■□□□ 1.59
PCNX3-203ENST00000530174 STARD3NLO95772 234 aa24.96■■□□□ 1.59
PCNX3-203ENST00000530174 PNNQ9H307 717 aaKnown RBP24.96■■□□□ 1.59
PCNX3-203ENST00000530174 COL15A1P39059 1388 aa24.95■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms