RNA–Protein interactions for RNA: ENST00000530141.5

CMTM1-214, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 880 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-214ENST00000530141 USP6P35125 1406 aa10.71□□□□□ -0.69
CMTM1-214ENST00000530141 U2AF1Q01081 240 aaKnown RBP eCLIP10.71□□□□□ -0.69
CMTM1-214ENST00000530141 PAPPAQ13219 1627 aa10.71□□□□□ -0.69
CMTM1-214ENST00000530141 CCDC27Q2M243 656 aa10.71□□□□□ -0.69
CMTM1-214ENST00000530141 TTC21BQ7Z4L5 1316 aa10.71□□□□□ -0.69
CMTM1-214ENST00000530141 ZNF521Q96K83 1311 aa10.71□□□□□ -0.69
CMTM1-214ENST00000530141 RCAN3Q9UKA8 241 aa10.71□□□□□ -0.69
CMTM1-214ENST00000530141 SALL2Q9Y467 1007 aaPredicted RBP10.71□□□□□ -0.69
CMTM1-214ENST00000530141 CEP350Q5VT06 3117 aa10.71□□□□□ -0.7
CMTM1-214ENST00000530141 TUBGCP6Q96RT7 1819 aa10.7□□□□□ -0.7
CMTM1-214ENST00000530141 MAPK8IP3Q9UPT6 1336 aa10.7□□□□□ -0.7
CMTM1-214ENST00000530141 TIE1P35590 1138 aa10.7□□□□□ -0.7
CMTM1-214ENST00000530141 PPP4R2Q9NY27 417 aa10.7□□□□□ -0.7
CMTM1-214ENST00000530141 COL3A1P02461 1466 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-214ENST00000530141 CRB1P82279 1406 aa10.69□□□□□ -0.7
CMTM1-214ENST00000530141 WDR63Q8IWG1 891 aa10.69□□□□□ -0.7
CMTM1-214ENST00000530141 CCDC146Q8IYE0 955 aa10.69□□□□□ -0.7
CMTM1-214ENST00000530141 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-214ENST00000530141 BMP2KQ9NSY1 1161 aaPredicted RBP10.69□□□□□ -0.7
CMTM1-214ENST00000530141 COL18A1P39060 1754 aa10.69□□□□□ -0.7
CMTM1-214ENST00000530141 FCHSD2O94868 740 aa10.68□□□□□ -0.7
CMTM1-214ENST00000530141 SLFN5Q08AF3 891 aa10.68□□□□□ -0.7
CMTM1-214ENST00000530141 TXNRD1Q16881 649 aa10.68□□□□□ -0.7
CMTM1-214ENST00000530141 NME9Q86XW9 330 aa10.68□□□□□ -0.7
CMTM1-214ENST00000530141 MARCH10Q8NA82 808 aaPredicted RBP10.68□□□□□ -0.7
CMTM1-214ENST00000530141 STK32BQ9NY57 414 aa10.68□□□□□ -0.7
CMTM1-214ENST00000530141 POLKQ9UBT6 870 aa10.68□□□□□ -0.7
CMTM1-214ENST00000530141 NHSQ6T4R5 1651 aa10.68□□□□□ -0.7
CMTM1-214ENST00000530141 USP31Q70CQ4 1352 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 USP19O94966 1318 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 U2SURPO15042 1029 aaKnown RBP10.67□□□□□ -0.7
CMTM1-214ENST00000530141 PLSCR1O15162 318 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 RRP1P56182 461 aaKnown RBP10.67□□□□□ -0.7
CMTM1-214ENST00000530141 SLC15A2Q16348 729 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 DDB1Q16531 1140 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 GPR162Q16538 588 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 ABTB2Q8N961 1025 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 BTAF1O14981 1849 aa10.67□□□□□ -0.7
CMTM1-214ENST00000530141 PIK3C2AO00443 1686 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 CPDO75976 1380 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 ATN1P54259 1190 aaPredicted RBP10.66□□□□□ -0.7
CMTM1-214ENST00000530141 ZNF827Q17R98 1081 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 DUSP27Q5VZP5 1158 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 TRMT2AQ8IZ69 625 aaKnown RBP10.66□□□□□ -0.7
CMTM1-214ENST00000530141 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 ARXQ96QS3 562 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 MTFR1LQ9H019 292 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 PCDHB8Q9UN66 801 aa10.66□□□□□ -0.7
CMTM1-214ENST00000530141 KIF24Q5T7B8 1368 aa10.65□□□□□ -0.7
CMTM1-214ENST00000530141 CALD1Q05682 793 aaKnown RBP10.65□□□□□ -0.7
CMTM1-214ENST00000530141 ZNF467Q7Z7K2 595 aaPredicted RBP10.65□□□□□ -0.7
CMTM1-214ENST00000530141 WWC1Q8IX03 1113 aa10.65□□□□□ -0.7
CMTM1-214ENST00000530141 CDCA7LQ96GN5 454 aa10.65□□□□□ -0.7
CMTM1-214ENST00000530141 ACSBG1Q96GR2 724 aa10.65□□□□□ -0.7
CMTM1-214ENST00000530141 MYH16Q9H6N6 1097 aa10.65□□□□□ -0.7
CMTM1-214ENST00000530141 TTLL13PA6NNM8 815 aa10.64□□□□□ -0.71
CMTM1-214ENST00000530141 GCP02774 474 aa10.64□□□□□ -0.71
CMTM1-214ENST00000530141 PRKCSHP14314 528 aaPredicted RBP10.64□□□□□ -0.71
CMTM1-214ENST00000530141 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
CMTM1-214ENST00000530141 TOM1L2Q6ZVM7 507 aa10.64□□□□□ -0.71
CMTM1-214ENST00000530141 THRAP3Q9Y2W1 955 aaKnown RBP10.64□□□□□ -0.71
CMTM1-214ENST00000530141 GOLGB1Q14789 3259 aaKnown RBP10.64□□□□□ -0.71
CMTM1-214ENST00000530141 SLIT3O75094 1523 aa10.63□□□□□ -0.71
CMTM1-214ENST00000530141 IL16Q14005 1332 aa10.63□□□□□ -0.71
CMTM1-214ENST00000530141 PPM1GO15355 546 aaPredicted RBP10.63□□□□□ -0.71
CMTM1-214ENST00000530141 SOX12O15370 315 aa10.63□□□□□ -0.71
CMTM1-214ENST00000530141 CT47B1P0C2W7 299 aaPredicted RBP10.63□□□□□ -0.71
CMTM1-214ENST00000530141 ZNF526Q8TF50 670 aaPredicted RBP10.63□□□□□ -0.71
CMTM1-214ENST00000530141 PLEKHF1Q96S99 279 aa10.63□□□□□ -0.71
CMTM1-214ENST00000530141 AXIN2Q9Y2T1 843 aa10.63□□□□□ -0.71
CMTM1-214ENST00000530141 ATP10DQ9P241 1426 aa10.62□□□□□ -0.71
CMTM1-214ENST00000530141 YBX3P16989 372 aaKnown RBP eCLIP10.62□□□□□ -0.71
CMTM1-214ENST00000530141 IL13P35225 146 aa10.62□□□□□ -0.71
CMTM1-214ENST00000530141 KAT6BQ8WYB5 2073 aa10.62□□□□□ -0.71
CMTM1-214ENST00000530141 COL24A1Q17RW2 1714 aa10.61□□□□□ -0.71
CMTM1-214ENST00000530141 TMPOP42166 694 aaKnown RBP10.61□□□□□ -0.71
CMTM1-214ENST00000530141 KCNQ4P56696 695 aa10.61□□□□□ -0.71
CMTM1-214ENST00000530141 EMILIN1Q9Y6C2 1016 aa10.61□□□□□ -0.71
CMTM1-214ENST00000530141 FLT4P35916 1363 aa10.61□□□□□ -0.71
CMTM1-214ENST00000530141 TNS2Q63HR2 1409 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 IRX6P78412 446 aaPredicted RBP10.6□□□□□ -0.71
CMTM1-214ENST00000530141 NEUROD2Q15784 382 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 TMEM106CQ9BVX2 250 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 RSPH6AQ9H0K4 717 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 WWC3Q9ULE0 1092 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 MAP3K5Q99683 1374 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 USP54Q70EL1 1684 aa10.6□□□□□ -0.71
CMTM1-214ENST00000530141 QSER1Q2KHR3 1735 aa10.59□□□□□ -0.71
CMTM1-214ENST00000530141 C7P10643 843 aa10.59□□□□□ -0.71
CMTM1-214ENST00000530141 PRKAR2BP31323 418 aa10.59□□□□□ -0.71
CMTM1-214ENST00000530141 NLRP6P59044 892 aa10.59□□□□□ -0.71
CMTM1-214ENST00000530141 RRS1Q15050 365 aaKnown RBP10.59□□□□□ -0.71
CMTM1-214ENST00000530141 KCNH5Q8NCM2 988 aa10.59□□□□□ -0.71
CMTM1-214ENST00000530141 LRRC4BQ9NT99 713 aa10.59□□□□□ -0.71
CMTM1-214ENST00000530141 RTL1A6NKG5 1358 aa10.59□□□□□ -0.71
CMTM1-214ENST00000530141 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.71
CMTM1-214ENST00000530141 MAP2P11137 1827 aaKnown RBP10.58□□□□□ -0.72
CMTM1-214ENST00000530141 CSB-PGBD3P0DP91 1061 aa10.58□□□□□ -0.72
CMTM1-214ENST00000530141 AMPHP49418 695 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms