RNA–Protein interactions for RNA: ENST00000529945.2

PDE4DIP-227, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 1 (best) BASIC

Gene PDE4DIP, Length 8,824 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-227ENST00000529945 NUF2Q9BZD4 464 aa14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 MAP4K4O95819 1239 aaPredicted RBP14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 PRPF4BQ13523 1007 aaKnown RBP14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 BUB1BO60566 1050 aaPredicted RBP14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 SH3BGRP55822 239 aaPredicted RBP14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 CCDC114Q96M63 670 aa14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 VGLL3A8MV65 326 aa14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 CACNA2D4Q7Z3S7 1137 aa14.67□□□□□ -0.06
PDE4DIP-227ENST00000529945 SPTY2D1Q68D10 685 aaPredicted RBP14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 GSDMBQ8TAX9 411 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 ATRIPQ8WXE1 791 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 MYBBP1AQ9BQG0 1328 aaKnown RBP14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 SSBP05455 408 aaKnown RBP eCLIP14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 MCM2P49736 904 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 C1orf141Q5JVX7 400 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 ALS2CR12Q96Q35 445 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 BMP2KQ9NSY1 1161 aaPredicted RBP14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 CCDC83Q8IWF9 413 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 LMNTD2Q8IXW0 634 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 CXorf38Q8TB03 319 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 NECTIN2Q92692 538 aa14.66□□□□□ -0.06
PDE4DIP-227ENST00000529945 KRT85P78386 507 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 CACNA2D3Q8IZS8 1091 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 NUP88Q99567 741 aaPredicted RBP14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 ZBTB12Q9Y330 459 aaPredicted RBP14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 FAM160A1Q05DH4 1040 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 ATP2B2Q01814 1243 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 WHAMMP3Q1A5X7 153 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 CCDC63Q8NA47 563 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 LACTBP83111 547 aaPredicted RBP14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 ZNF365Q70YC5 407 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 FHAD1B1AJZ9 1412 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 WRNQ14191 1432 aaPredicted RBP eCLIP14.65□□□□□ -0.061e-7■■■■■ 66.8
PDE4DIP-227ENST00000529945 GBP1P32455 592 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 CCDC110Q8TBZ0 833 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 NEUROD6Q96NK8 337 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 LNPKQ9C0E8 428 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 RASSF4Q9H2L5 321 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 RSPH3Q86UC2 560 aa14.65□□□□□ -0.06
PDE4DIP-227ENST00000529945 NDC80O14777 642 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 MAP7Q14244 749 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 CCDC150Q8NCX0 1101 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 EIF2S2P20042 333 aaKnown RBP14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 CKAP4Q07065 602 aaKnown RBP14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 NEK4P51957 841 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 RGS22Q8NE09 1264 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 JADE2Q9NQC1 790 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 VPS41P49754 854 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 NUP62CLQ9H1M0 184 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 CAPN2P17655 700 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 FERMT1Q9BQL6 677 aa14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 ZRANB2O95218 330 aaKnown RBP eCLIP14.64□□□□□ -0.07
PDE4DIP-227ENST00000529945 EBAG9O00559 213 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 CCDC144CPQ8IYA2 1237 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 TRMT1Q9NXH9 659 aaKnown RBP14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 DIAPH1O60610 1272 aaKnown RBP14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 MVPQ14764 893 aaKnown RBP14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 DDX12PQ92771 950 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 CDC45O75419 566 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 CIB2O75838 187 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 SPATA32Q96LK8 384 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 SYCE3A1L190 88 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 XPCQ01831 940 aaPredicted RBP14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 STK3Q13188 491 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 FKBP15Q5T1M5 1219 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 VPS8Q8N3P4 1428 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 CEP85LQ5SZL2 805 aa14.63□□□□□ -0.07
PDE4DIP-227ENST00000529945 TRIM22Q8IYM9 498 aa14.62□□□□□ -0.07
PDE4DIP-227ENST00000529945 OPA1O60313 960 aa14.62□□□□□ -0.07
PDE4DIP-227ENST00000529945 RNF8O76064 485 aa14.62□□□□□ -0.07
PDE4DIP-227ENST00000529945 TTC5Q8N0Z6 440 aa14.62□□□□□ -0.07
PDE4DIP-227ENST00000529945 KIF27Q86VH2 1401 aa14.62□□□□□ -0.07
PDE4DIP-227ENST00000529945 CAMK4Q16566 473 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 TTC14Q96N46 770 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 MKL2Q9ULH7 1088 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 WDR33Q9C0J8 1336 aaKnown RBP14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 MCM6Q14566 821 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 TOP1P11387 765 aaKnown RBP14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 COG7P83436 770 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 STMN4Q9H169 189 aaPredicted RBP14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 CHMP7Q8WUX9 453 aaPredicted RBP14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 ARFGAP3Q9NP61 516 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 CLIP2Q9UDT6 1046 aa14.61□□□□□ -0.07
PDE4DIP-227ENST00000529945 PRKRIP1Q9H875 184 aaPredicted RBP14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 PFDN1O60925 122 aa14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 MAP3K11Q16584 847 aa14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 AP1ARQ63HQ0 302 aa14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 CALCOCO2Q13137 446 aa14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 INPP1P49441 399 aa14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 PKD2Q13563 968 aa14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 TERF2IPQ9NYB0 399 aa14.6□□□□□ -0.07
PDE4DIP-227ENST00000529945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 ZEB2O60315 1214 aa14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 DDX58O95786 925 aaKnown RBP14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 SMIM24O75264 130 aa14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 SYF2O95926 243 aaKnown RBP14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 CFAP157Q5JU67 520 aa14.59□□□□□ -0.07
PDE4DIP-227ENST00000529945 CPLX4Q7Z7G2 160 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms