RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 USHBP1Q8N6Y0 703 aa19.71■□□□□ 0.75
TM9SF1-208ENST00000529332 GCC1Q96CN9 775 aa19.71■□□□□ 0.75
TM9SF1-208ENST00000529332 CHMP4BQ9H444 224 aaKnown RBP19.7■□□□□ 0.74
TM9SF1-208ENST00000529332 MTHFSDQ2M296 383 aaKnown RBP19.7■□□□□ 0.74
TM9SF1-208ENST00000529332 PRDM11Q9NQV5 511 aa19.7■□□□□ 0.74
TM9SF1-208ENST00000529332 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
TM9SF1-208ENST00000529332 CHMP5Q9NZZ3 219 aa19.69■□□□□ 0.74
TM9SF1-208ENST00000529332 CHRNA2Q15822 529 aa19.68■□□□□ 0.74
TM9SF1-208ENST00000529332 COL16A1Q07092 1604 aaPredicted RBP19.68■□□□□ 0.74
TM9SF1-208ENST00000529332 HTATSF1O43719 755 aaKnown RBP19.67■□□□□ 0.74
TM9SF1-208ENST00000529332 MCM4P33991 863 aa19.67■□□□□ 0.74
TM9SF1-208ENST00000529332 HSCBQ8IWL3 235 aa19.67■□□□□ 0.74
TM9SF1-208ENST00000529332 CSB-PGBD3P0DP91 1061 aa19.66■□□□□ 0.74
TM9SF1-208ENST00000529332 MAP3K5Q99683 1374 aa19.66■□□□□ 0.74
TM9SF1-208ENST00000529332 API5Q9BZZ5 524 aaKnown RBP19.66■□□□□ 0.74
TM9SF1-208ENST00000529332 NLRP2Q9NX02 1062 aa19.65■□□□□ 0.74
TM9SF1-208ENST00000529332 LRRC37A3O60309 1634 aa19.65■□□□□ 0.74
TM9SF1-208ENST00000529332 GNAT3A8MTJ3 354 aa19.64■□□□□ 0.74
TM9SF1-208ENST00000529332 AMOTQ4VCS5 1084 aa19.64■□□□□ 0.74
TM9SF1-208ENST00000529332 SNX21Q969T3 373 aa19.64■□□□□ 0.74
TM9SF1-208ENST00000529332 PLEKHG2Q9H7P9 1386 aa19.64■□□□□ 0.73
TM9SF1-208ENST00000529332 UBAP1LF5GYI3 381 aa19.64■□□□□ 0.73
TM9SF1-208ENST00000529332 PLEKHO1Q53GL0 409 aaPredicted RBP19.64■□□□□ 0.73
TM9SF1-208ENST00000529332 KIF2CQ99661 725 aa19.64■□□□□ 0.73
TM9SF1-208ENST00000529332 DDIT3P35638 169 aa19.63■□□□□ 0.73
TM9SF1-208ENST00000529332 PIP4K2BP78356 416 aa19.63■□□□□ 0.73
TM9SF1-208ENST00000529332 COL14A1Q05707 1796 aaKnown RBP19.63■□□□□ 0.73
TM9SF1-208ENST00000529332 TBC1D9Q6ZT07 1266 aa19.63■□□□□ 0.73
TM9SF1-208ENST00000529332 MCM10Q7L590 875 aa19.63■□□□□ 0.73
TM9SF1-208ENST00000529332 COL5A2P05997 1499 aaPredicted RBP19.62■□□□□ 0.73
TM9SF1-208ENST00000529332 KRT24Q2M2I5 525 aa19.62■□□□□ 0.73
TM9SF1-208ENST00000529332 RAPGEF4Q8WZA2 1011 aa19.61■□□□□ 0.73
TM9SF1-208ENST00000529332 WDR17Q8IZU2 1322 aa19.61■□□□□ 0.73
TM9SF1-208ENST00000529332 RGS12O14924 1447 aa19.59■□□□□ 0.73
TM9SF1-208ENST00000529332 CRB1P82279 1406 aa19.59■□□□□ 0.73
TM9SF1-208ENST00000529332 INTS3Q68E01 1043 aaKnown RBP19.59■□□□□ 0.73
TM9SF1-208ENST00000529332 ZNF530Q6P9A1 599 aaPredicted RBP19.59■□□□□ 0.73
TM9SF1-208ENST00000529332 PARP4Q9UKK3 1724 aaKnown RBP19.59■□□□□ 0.73
TM9SF1-208ENST00000529332 CHL1O00533 1208 aa19.58■□□□□ 0.73
TM9SF1-208ENST00000529332 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.73
TM9SF1-208ENST00000529332 GSPT1P15170 499 aaKnown RBP19.58■□□□□ 0.72
TM9SF1-208ENST00000529332 C1orf141Q5JVX7 400 aa19.58■□□□□ 0.72
TM9SF1-208ENST00000529332 DCTPP1Q9H773 170 aa19.58■□□□□ 0.72
TM9SF1-208ENST00000529332 CD2BP2O95400 341 aaKnown RBP19.57■□□□□ 0.72
TM9SF1-208ENST00000529332 AKAP4Q5JQC9 854 aa19.57■□□□□ 0.72
TM9SF1-208ENST00000529332 PKD1L3Q7Z443 1732 aa19.57■□□□□ 0.72
TM9SF1-208ENST00000529332 L1TD1Q5T7N2 865 aaKnown RBP19.57■□□□□ 0.72
TM9SF1-208ENST00000529332 PLEKHM2Q8IWE5 1019 aa19.57■□□□□ 0.72
TM9SF1-208ENST00000529332 ATP10DQ9P241 1426 aa19.56■□□□□ 0.72
TM9SF1-208ENST00000529332 TRAK2O60296 914 aa19.56■□□□□ 0.72
TM9SF1-208ENST00000529332 TOM1L2Q6ZVM7 507 aa19.56■□□□□ 0.72
TM9SF1-208ENST00000529332 CERKQ8TCT0 537 aa19.56■□□□□ 0.72
TM9SF1-208ENST00000529332 GZF1Q9H116 711 aaPredicted RBP19.56■□□□□ 0.72
TM9SF1-208ENST00000529332 OVOS2A0A0G2JMS6 1433 aa19.56■□□□□ 0.72
TM9SF1-208ENST00000529332 EVA1CP58658 441 aa19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 SPG7Q9UQ90 795 aa19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 MEGF6O75095 1541 aa19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 FSD2A1L4K1 749 aa19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 CDC45O75419 566 aa19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 HSP90AB1P08238 724 aaKnown RBP19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 RBM42Q9BTD8 480 aaKnown RBP19.55■□□□□ 0.72
TM9SF1-208ENST00000529332 ANKRD44Q8N8A2 993 aa19.54■□□□□ 0.72
TM9SF1-208ENST00000529332 BABAM1Q9NWV8 329 aa19.54■□□□□ 0.72
TM9SF1-208ENST00000529332 CEMIPQ8WUJ3 1361 aa19.53■□□□□ 0.72
TM9SF1-208ENST00000529332 C16orf71Q8IYS4 520 aaPredicted RBP19.53■□□□□ 0.72
TM9SF1-208ENST00000529332 IL17REQ8NFR9 667 aa19.53■□□□□ 0.72
TM9SF1-208ENST00000529332 CARD10Q9BWT7 1032 aa19.53■□□□□ 0.72
TM9SF1-208ENST00000529332 PLCH1Q4KWH8 1693 aa19.53■□□□□ 0.72
TM9SF1-208ENST00000529332 STRN4Q9NRL3 753 aa19.52■□□□□ 0.72
TM9SF1-208ENST00000529332 TSPYL4Q9UJ04 414 aa19.52■□□□□ 0.72
TM9SF1-208ENST00000529332 CEP85Q6P2H3 762 aa19.52■□□□□ 0.72
TM9SF1-208ENST00000529332 TNPO1Q92973 898 aaKnown RBP19.52■□□□□ 0.72
TM9SF1-208ENST00000529332 ANO8Q9HCE9 1232 aaPredicted RBP19.52■□□□□ 0.72
TM9SF1-208ENST00000529332 CIZ1Q9ULV3 898 aaPredicted RBP19.52■□□□□ 0.72
TM9SF1-208ENST00000529332 ADAMTS7Q9UKP4 1686 aa19.52■□□□□ 0.71
TM9SF1-208ENST00000529332 GOLGA6L3A6NEY3 463 aa19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 DDX11L8A8MPP1 907 aa19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 XRCC6P12956 609 aaKnown RBP eCLIP19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 FAM43AQ8N2R8 423 aa19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 ARXQ96QS3 562 aa19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 BTG4Q9NY30 223 aa19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 OTUD7AQ8TE49 926 aaPredicted RBP19.51■□□□□ 0.71
TM9SF1-208ENST00000529332 K7ELQ4 463 aaPredicted RBP19.5■□□□□ 0.71
TM9SF1-208ENST00000529332 RAB3GAP1Q15042 981 aa19.5■□□□□ 0.71
TM9SF1-208ENST00000529332 RPAP2Q8IXW5 612 aaPredicted RBP19.5■□□□□ 0.71
TM9SF1-208ENST00000529332 SCN11AQ9UI33 1791 aa19.5■□□□□ 0.71
TM9SF1-208ENST00000529332 PTPRCP08575 1304 aa19.5■□□□□ 0.71
TM9SF1-208ENST00000529332 MEIS3Q99687 375 aa19.49■□□□□ 0.71
TM9SF1-208ENST00000529332 MIS18AQ9NYP9 233 aa19.49■□□□□ 0.71
TM9SF1-208ENST00000529332 TEFQ10587 303 aa19.49■□□□□ 0.71
TM9SF1-208ENST00000529332 LARP1Q6PKG0 1096 aaKnown RBP19.49■□□□□ 0.71
TM9SF1-208ENST00000529332 FOXD4L1Q9NU39 408 aa19.49■□□□□ 0.71
TM9SF1-208ENST00000529332 KDM3BQ7LBC6 1761 aa19.48■□□□□ 0.71
TM9SF1-208ENST00000529332 JCADQ9P266 1359 aa19.48■□□□□ 0.71
TM9SF1-208ENST00000529332 SIPA1L3O60292 1781 aaPredicted RBP19.48■□□□□ 0.71
TM9SF1-208ENST00000529332 RNMTO43148 476 aaKnown RBP19.48■□□□□ 0.71
TM9SF1-208ENST00000529332 NWD2Q9ULI1 1742 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms