RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 TAF1LQ8IZX4 1826 aa15.35■□□□□ 0.05
CCDC90B-211ENST00000529073 U2AF1L5P0DN76 240 aaPredicted RBP15.34■□□□□ 0.05
CCDC90B-211ENST00000529073 U2AF1Q01081 240 aaKnown RBP eCLIP15.34■□□□□ 0.05
CCDC90B-211ENST00000529073 CFAP53Q96M91 514 aa15.33■□□□□ 0.04
CCDC90B-211ENST00000529073 SLC4A9Q96Q91 983 aa15.33■□□□□ 0.04
CCDC90B-211ENST00000529073 ATG3Q9NT62 314 aa15.33■□□□□ 0.04
CCDC90B-211ENST00000529073 MRC1P22897 1456 aa15.33■□□□□ 0.04
CCDC90B-211ENST00000529073 TJP1Q07157 1748 aa15.32■□□□□ 0.04
CCDC90B-211ENST00000529073 PRKRIP1Q9H875 184 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-211ENST00000529073 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
CCDC90B-211ENST00000529073 SIPA1L3O60292 1781 aaPredicted RBP15.31■□□□□ 0.04
CCDC90B-211ENST00000529073 SENP3-EIF4A1A0A087X0R7 540 aa15.31■□□□□ 0.04
CCDC90B-211ENST00000529073 ITPK1Q13572 414 aa15.31■□□□□ 0.04
CCDC90B-211ENST00000529073 TMOD3Q9NYL9 352 aa15.31■□□□□ 0.04
CCDC90B-211ENST00000529073 MYBBP1AQ9BQG0 1328 aaKnown RBP15.31■□□□□ 0.04
CCDC90B-211ENST00000529073 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
CCDC90B-211ENST00000529073 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
CCDC90B-211ENST00000529073 C4BP0C0L5 1744 aa15.3■□□□□ 0.04
CCDC90B-211ENST00000529073 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
CCDC90B-211ENST00000529073 AMOTQ4VCS5 1084 aa15.3■□□□□ 0.04
CCDC90B-211ENST00000529073 C1orf141Q5JVX7 400 aa15.3■□□□□ 0.04
CCDC90B-211ENST00000529073 CCNL1Q9UK58 526 aaPredicted RBP15.3■□□□□ 0.04
CCDC90B-211ENST00000529073 LRP5O75197 1615 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 KCPQ6ZWJ8 1503 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 MAP3K5Q99683 1374 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 PLEKHG2Q9H7P9 1386 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 SLC39A6Q13433 755 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 RALBP1Q15311 655 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 AKAP4Q5JQC9 854 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 NFATC2IPQ8NCF5 419 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 AKT1S1Q96B36 256 aa15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 COL5A3P25940 1745 aaPredicted RBP15.29■□□□□ 0.04
CCDC90B-211ENST00000529073 ABCB7O75027 752 aa15.28■□□□□ 0.04
CCDC90B-211ENST00000529073 SLC15A2Q16348 729 aa15.28■□□□□ 0.04
CCDC90B-211ENST00000529073 CCDC146Q8IYE0 955 aa15.28■□□□□ 0.04
CCDC90B-211ENST00000529073 IL17REQ8NFR9 667 aa15.28■□□□□ 0.04
CCDC90B-211ENST00000529073 DCAF5Q96JK2 942 aa15.28■□□□□ 0.04
CCDC90B-211ENST00000529073 PNPLA7Q6ZV29 1317 aa15.27■□□□□ 0.04
CCDC90B-211ENST00000529073 ZBTB7AO95365 584 aa15.27■□□□□ 0.04
CCDC90B-211ENST00000529073 CABP4P57796 275 aa15.27■□□□□ 0.04
CCDC90B-211ENST00000529073 PLEKHF1Q96S99 279 aa15.27■□□□□ 0.04
CCDC90B-211ENST00000529073 MCM10Q7L590 875 aa15.26■□□□□ 0.03
CCDC90B-211ENST00000529073 THUMPD2Q9BTF0 503 aaKnown RBP15.26■□□□□ 0.03
CCDC90B-211ENST00000529073 STK32BQ9NY57 414 aa15.26■□□□□ 0.03
CCDC90B-211ENST00000529073 UBR2Q8IWV8 1755 aa15.26■□□□□ 0.03
CCDC90B-211ENST00000529073 QSER1Q2KHR3 1735 aa15.26■□□□□ 0.03
CCDC90B-211ENST00000529073 UBR3Q6ZT12 1888 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 LOC102724428A0A0B4J2F2 783 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 ERVV-2B6SEH9 535 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 KCNQ3O43525 872 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 SIK1P57059 783 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 NBPF14Q5TI25 921 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 RBM42Q9BTD8 480 aaKnown RBP15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 SLC52A2Q9HAB3 445 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
CCDC90B-211ENST00000529073 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
CCDC90B-211ENST00000529073 RRP7AQ9Y3A4 280 aaKnown RBP15.24■□□□□ 0.03
CCDC90B-211ENST00000529073 HSP90AB1P08238 724 aaKnown RBP15.23■□□□□ 0.03
CCDC90B-211ENST00000529073 SLC27A3Q5K4L6 730 aa15.23■□□□□ 0.03
CCDC90B-211ENST00000529073 MYH14Q7Z406 1995 aaKnown RBP15.22■□□□□ 0.03
CCDC90B-211ENST00000529073 GNAT3A8MTJ3 354 aa15.22■□□□□ 0.03
CCDC90B-211ENST00000529073 FCHSD2O94868 740 aa15.22■□□□□ 0.03
CCDC90B-211ENST00000529073 PHF14O94880 888 aa15.22■□□□□ 0.03
CCDC90B-211ENST00000529073 GAS2L2Q8NHY3 880 aa15.22■□□□□ 0.03
CCDC90B-211ENST00000529073 CEMIPQ8WUJ3 1361 aa15.22■□□□□ 0.03
CCDC90B-211ENST00000529073 CICQ96RK0 1608 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-211ENST00000529073 C4AP0C0L4 1744 aa15.21■□□□□ 0.03
CCDC90B-211ENST00000529073 ATP6V1AP38606 617 aa15.21■□□□□ 0.03
CCDC90B-211ENST00000529073 MSL1Q68DK7 614 aa15.21■□□□□ 0.03
CCDC90B-211ENST00000529073 COL23A1Q86Y22 540 aaPredicted RBP15.21■□□□□ 0.03
CCDC90B-211ENST00000529073 ADAMTS8Q9UP79 889 aa15.21■□□□□ 0.03
CCDC90B-211ENST00000529073 ZNF831Q5JPB2 1677 aa15.21■□□□□ 0.03
CCDC90B-211ENST00000529073 MIS18AQ9NYP9 233 aa15.2■□□□□ 0.02
CCDC90B-211ENST00000529073 PRAMEF22A3QJZ6 481 aa15.19■□□□□ 0.02
CCDC90B-211ENST00000529073 PTGER2P43116 358 aa15.19■□□□□ 0.02
CCDC90B-211ENST00000529073 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
CCDC90B-211ENST00000529073 SMARCC1Q92922 1105 aaPredicted RBP15.19■□□□□ 0.02
CCDC90B-211ENST00000529073 TFCP2L1Q9NZI6 479 aa15.19■□□□□ 0.02
CCDC90B-211ENST00000529073 NFE2L2Q16236 605 aa15.18■□□□□ 0.02
CCDC90B-211ENST00000529073 KDM3BQ7LBC6 1761 aa15.18■□□□□ 0.02
CCDC90B-211ENST00000529073 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
CCDC90B-211ENST00000529073 GNPATO15228 680 aa15.16■□□□□ 0.02
CCDC90B-211ENST00000529073 PIP4K2AP48426 406 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-211ENST00000529073 NEUROD2Q15784 382 aa15.16■□□□□ 0.02
CCDC90B-211ENST00000529073 ZNF496Q96IT1 587 aaPredicted RBP15.16■□□□□ 0.02
CCDC90B-211ENST00000529073 AK7Q96M32 723 aa15.16■□□□□ 0.02
CCDC90B-211ENST00000529073 SGIP1Q9BQI5 828 aa15.16■□□□□ 0.02
CCDC90B-211ENST00000529073 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.15■□□□□ 0.02
CCDC90B-211ENST00000529073 TEFQ10587 303 aa15.15■□□□□ 0.02
CCDC90B-211ENST00000529073 WDR43Q15061 677 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCDC90B-211ENST00000529073 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-211ENST00000529073 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-211ENST00000529073 INTS5Q6P9B9 1019 aaKnown RBP15.14■□□□□ 0.01
CCDC90B-211ENST00000529073 MAPK8IP3Q9UPT6 1336 aa15.14■□□□□ 0.01
CCDC90B-211ENST00000529073 SPON1Q9HCB6 807 aa15.13■□□□□ 0.01
CCDC90B-211ENST00000529073 BTBD11A6QL63 1104 aa15.12■□□□□ 0.01
CCDC90B-211ENST00000529073 CYP19A1P11511 503 aaPredicted RBP15.12■□□□□ 0.01
CCDC90B-211ENST00000529073 ZNF790Q6PG37 636 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms