RNA–Protein interactions for RNA: ENST00000528948.1

CAPRIN1-206, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-206ENST00000528948 NUCB1Q02818 461 aa11.01□□□□□ -0.65
CAPRIN1-206ENST00000528948 CAVIN1Q6NZI2 390 aaKnown RBP11.01□□□□□ -0.65
CAPRIN1-206ENST00000528948 ANKRD7Q92527 254 aa11.01□□□□□ -0.65
CAPRIN1-206ENST00000528948 IL16Q14005 1332 aa11.01□□□□□ -0.65
CAPRIN1-206ENST00000528948 COL9A1P20849 921 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 NOLC1Q14978 699 aaKnown RBP eCLIP11□□□□□ -0.65
CAPRIN1-206ENST00000528948 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
CAPRIN1-206ENST00000528948 RNF20Q5VTR2 975 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 CASC1Q6TDU7 716 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 RNF166Q96A37 237 aaPredicted RBP11□□□□□ -0.65
CAPRIN1-206ENST00000528948 TIGD1Q96MW7 591 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 RBSNQ9H1K0 784 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 TMEM51Q9NW97 253 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 USP25Q9UHP3 1055 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 MYOM2P54296 1465 aa11□□□□□ -0.65
CAPRIN1-206ENST00000528948 USP32Q8NFA0 1604 aa10.99□□□□□ -0.65
CAPRIN1-206ENST00000528948 CDC45O75419 566 aa10.99□□□□□ -0.65
CAPRIN1-206ENST00000528948 ZNF771Q7L3S4 317 aaPredicted RBP10.99□□□□□ -0.65
CAPRIN1-206ENST00000528948 CFAP53Q96M91 514 aa10.99□□□□□ -0.65
CAPRIN1-206ENST00000528948 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
CAPRIN1-206ENST00000528948 CTIFO43310 598 aaKnown RBP10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 HRO43593 1189 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 SSFA2P28290 1259 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 MCTP1Q6DN14 999 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 CTR9Q6PD62 1173 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 NBPF3Q9H094 633 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 SBNO2Q9Y2G9 1366 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 PDS5BQ9NTI5 1447 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 MYOM1P52179 1685 aa10.98□□□□□ -0.65
CAPRIN1-206ENST00000528948 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
CAPRIN1-206ENST00000528948 BRPF1P55201 1214 aaPredicted RBP10.97□□□□□ -0.65
CAPRIN1-206ENST00000528948 CHD1LQ86WJ1 897 aa10.97□□□□□ -0.65
CAPRIN1-206ENST00000528948 RBM27Q9P2N5 1060 aaKnown RBP10.97□□□□□ -0.65
CAPRIN1-206ENST00000528948 RABGEF1Q9UJ41 708 aa10.97□□□□□ -0.65
CAPRIN1-206ENST00000528948 NSD2O96028 1365 aa10.97□□□□□ -0.65
CAPRIN1-206ENST00000528948 MADDQ8WXG6 1647 aa10.96□□□□□ -0.65
CAPRIN1-206ENST00000528948 CBX1P83916 185 aa10.96□□□□□ -0.65
CAPRIN1-206ENST00000528948 ALDH1L2Q3SY69 923 aa10.96□□□□□ -0.65
CAPRIN1-206ENST00000528948 YY1AP1Q9H869 796 aa10.96□□□□□ -0.65
CAPRIN1-206ENST00000528948 PRDM10Q9NQV6 1147 aa10.96□□□□□ -0.65
CAPRIN1-206ENST00000528948 PAXBP1Q9Y5B6 917 aa10.96□□□□□ -0.65
CAPRIN1-206ENST00000528948 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.96□□□□□ -0.655e-12■□□□□ 9.5
CAPRIN1-206ENST00000528948 PLB1Q6P1J6 1458 aa10.95□□□□□ -0.66
CAPRIN1-206ENST00000528948 KIF24Q5T7B8 1368 aa10.95□□□□□ -0.66
CAPRIN1-206ENST00000528948 ZNF644Q9H582 1327 aaPredicted RBP10.95□□□□□ -0.66
CAPRIN1-206ENST00000528948 TRIM6-TRIM34B2RNG4 842 aa10.95□□□□□ -0.66
CAPRIN1-206ENST00000528948 ATF7IPQ6VMQ6 1270 aa10.95□□□□□ -0.66
CAPRIN1-206ENST00000528948 ADGRB2O60241 1585 aa10.94□□□□□ -0.66
CAPRIN1-206ENST00000528948 EPB41L2O43491 1005 aaKnown RBP10.94□□□□□ -0.66
CAPRIN1-206ENST00000528948 PRSS12P56730 875 aa10.94□□□□□ -0.66
CAPRIN1-206ENST00000528948 INTS4Q96HW7 963 aaKnown RBP10.94□□□□□ -0.66
CAPRIN1-206ENST00000528948 KIF2CQ99661 725 aa10.94□□□□□ -0.66
CAPRIN1-206ENST00000528948 EFCC1Q9HA90 598 aa10.94□□□□□ -0.66
CAPRIN1-206ENST00000528948 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
CAPRIN1-206ENST00000528948 SMTNL1A8MU46 457 aa10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 BHMG1C9JSJ3 638 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 REC8O95072 547 aa10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 INTS3Q68E01 1043 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 PACS2Q86VP3 889 aa10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 KRT222Q8N1A0 295 aa10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 PUS7Q96PZ0 661 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 MORC2Q9Y6X9 1032 aaPredicted RBP10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 TARBP1Q13395 1621 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 URB2Q14146 1524 aaKnown RBP10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 DISP1Q96F81 1524 aa10.93□□□□□ -0.66
CAPRIN1-206ENST00000528948 CEP152O94986 1710 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 SHPRHQ149N8 1683 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 DHX8Q14562 1220 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 PROX2Q3B8N5 592 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 SLFNL1Q499Z3 407 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 LAPTM4BQ86VI4 370 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 CCDC146Q8IYE0 955 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 MRPL50Q8N5N7 158 aaKnown RBP10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 GAS2L2Q8NHY3 880 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 ARHGAP45Q92619 1136 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 ZBTB40Q9NUA8 1239 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 MED14O60244 1454 aa10.92□□□□□ -0.66
CAPRIN1-206ENST00000528948 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 NUTM2FA1L443 756 aa10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 KIF2AO00139 706 aaPredicted RBP10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 PRPF40AO75400 957 aaKnown RBP10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 TUBB4AP04350 444 aa10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 RLBP1P12271 317 aa10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 IRX3P78415 501 aaPredicted RBP10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 TEX2Q8IWB9 1127 aa10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 DDX41Q9UJV9 622 aaKnown RBP10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 ATP6V1DQ9Y5K8 247 aa10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 PLA2R1Q13018 1463 aa10.91□□□□□ -0.66
CAPRIN1-206ENST00000528948 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 FCHSD2O94868 740 aa10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 CCDC183Q5T5S1 534 aa10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 TMEM87AQ8NBN3 555 aa10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 SMC4Q9NTJ3 1288 aa10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 KIAA1468Q9P260 1216 aa10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 CARMIL2Q6F5E8 1435 aa10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 PRG4Q92954 1404 aaPredicted RBP10.9□□□□□ -0.66
CAPRIN1-206ENST00000528948 TDRD9Q8NDG6 1382 aaKnown RBP10.9□□□□□ -0.67
CAPRIN1-206ENST00000528948 ERCC6Q03468 1493 aa10.89□□□□□ -0.67
CAPRIN1-206ENST00000528948 SYCE3A1L190 88 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms