RNA–Protein interactions for RNA: ENST00000528828.1

NSD3-209, Transcript of nuclear receptor binding SET domain protein 3, humanhuman

TSL 1 (best)

Gene NSD3, Length 1,376 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSD3-209ENST00000528828 HOXC9P31274 260 aa11.17□□□□□ -0.62
NSD3-209ENST00000528828 ARXQ96QS3 562 aa11.17□□□□□ -0.62
NSD3-209ENST00000528828 FHDC1Q9C0D6 1143 aaPredicted RBP11.17□□□□□ -0.62
NSD3-209ENST00000528828 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
NSD3-209ENST00000528828 COG3Q96JB2 828 aa11.16□□□□□ -0.62
NSD3-209ENST00000528828 MTFR1LQ9H019 292 aa11.16□□□□□ -0.62
NSD3-209ENST00000528828 IRX5P78411 483 aaPredicted RBP11.16□□□□□ -0.62
NSD3-209ENST00000528828 USHBP1Q8N6Y0 703 aa11.16□□□□□ -0.62
NSD3-209ENST00000528828 SYT17Q9BSW7 474 aa11.16□□□□□ -0.62
NSD3-209ENST00000528828 GGNBP2Q9H3C7 697 aa11.16□□□□□ -0.62
NSD3-209ENST00000528828 PCDH10Q9P2E7 1040 aa11.16□□□□□ -0.62
NSD3-209ENST00000528828 MEGF6O75095 1541 aa11.15□□□□□ -0.62
NSD3-209ENST00000528828 FYB1O15117 783 aa11.15□□□□□ -0.63
NSD3-209ENST00000528828 AMPHP49418 695 aa11.15□□□□□ -0.63
NSD3-209ENST00000528828 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.63
NSD3-209ENST00000528828 FAM208AQ9UK61 1670 aaKnown RBP11.15□□□□□ -0.63
NSD3-209ENST00000528828 NSD2O96028 1365 aa11.14□□□□□ -0.63
NSD3-209ENST00000528828 RGPD2P0DJD1 1756 aa11.14□□□□□ -0.63
NSD3-209ENST00000528828 NBPF6Q5VWK0 638 aa11.14□□□□□ -0.63
NSD3-209ENST00000528828 SYTL4Q96C24 671 aaPredicted RBP11.14□□□□□ -0.63
NSD3-209ENST00000528828 NBPF4Q96M43 638 aa11.14□□□□□ -0.63
NSD3-209ENST00000528828 ANKRD36BQ8N2N9 1353 aa11.13□□□□□ -0.63
NSD3-209ENST00000528828 CHRM1P11229 460 aaPredicted RBP11.13□□□□□ -0.63
NSD3-209ENST00000528828 GSE1Q14687 1217 aa11.13□□□□□ -0.63
NSD3-209ENST00000528828 SHANK3Q9BYB0 1731 aa11.12□□□□□ -0.63
NSD3-209ENST00000528828 ZCRB1Q8TBF4 217 aaKnown RBP11.12□□□□□ -0.63
NSD3-209ENST00000528828 PNPLA7Q6ZV29 1317 aa11.12□□□□□ -0.63
NSD3-209ENST00000528828 USP47Q96K76 1375 aa11.12□□□□□ -0.63
NSD3-209ENST00000528828 DOT1LQ8TEK3 1739 aa11.11□□□□□ -0.63
NSD3-209ENST00000528828 FAM163AQ96GL9 167 aaPredicted RBP11.11□□□□□ -0.63
NSD3-209ENST00000528828 PCDHB8Q9UN66 801 aa11.11□□□□□ -0.63
NSD3-209ENST00000528828 TMF1P82094 1093 aa11.1□□□□□ -0.63
NSD3-209ENST00000528828 HSP90AB2PQ58FF8 381 aa11.1□□□□□ -0.63
NSD3-209ENST00000528828 SLC27A3Q5K4L6 730 aa11.1□□□□□ -0.63
NSD3-209ENST00000528828 KLHL34Q8N239 644 aa11.1□□□□□ -0.63
NSD3-209ENST00000528828 CARD14Q9BXL6 1004 aa11.1□□□□□ -0.63
NSD3-209ENST00000528828 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
NSD3-209ENST00000528828 PLCG2P16885 1265 aa11.09□□□□□ -0.63
NSD3-209ENST00000528828 ZNF784Q8NCA9 323 aaPredicted RBP11.09□□□□□ -0.63
NSD3-209ENST00000528828 TFCP2L1Q9NZI6 479 aa11.09□□□□□ -0.63
NSD3-209ENST00000528828 TUBGCP6Q96RT7 1819 aa11.08□□□□□ -0.64
NSD3-209ENST00000528828 RTL1A6NKG5 1358 aa11.08□□□□□ -0.64
NSD3-209ENST00000528828 OCEL1Q9H607 264 aa11.08□□□□□ -0.64
NSD3-209ENST00000528828 CCNL1Q9UK58 526 aaPredicted RBP11.08□□□□□ -0.64
NSD3-209ENST00000528828 UTRNP46939 3433 aa11.08□□□□□ -0.64
NSD3-209ENST00000528828 ZNF467Q7Z7K2 595 aaPredicted RBP11.07□□□□□ -0.64
NSD3-209ENST00000528828 NLGN2Q8NFZ4 835 aa11.07□□□□□ -0.64
NSD3-209ENST00000528828 EMILIN1Q9Y6C2 1016 aa11.07□□□□□ -0.64
NSD3-209ENST00000528828 INSRP06213 1382 aa11.07□□□□□ -0.64
NSD3-209ENST00000528828 MAP3K5Q99683 1374 aa11.07□□□□□ -0.64
NSD3-209ENST00000528828 CYP27B1O15528 508 aa11.06□□□□□ -0.64
NSD3-209ENST00000528828 RAPGEF4Q8WZA2 1011 aa11.06□□□□□ -0.64
NSD3-209ENST00000528828 LY75O60449 1722 aa11.06□□□□□ -0.64
NSD3-209ENST00000528828 NSD3Q9BZ95 1437 aa11.06□□□□□ -0.64
NSD3-209ENST00000528828 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
NSD3-209ENST00000528828 COL23A1Q86Y22 540 aaPredicted RBP11.05□□□□□ -0.64
NSD3-209ENST00000528828 SLC16A10Q8TF71 515 aa11.05□□□□□ -0.64
NSD3-209ENST00000528828 FLT4P35916 1363 aa11.05□□□□□ -0.64
NSD3-209ENST00000528828 QSER1Q2KHR3 1735 aa11.05□□□□□ -0.64
NSD3-209ENST00000528828 KIF20BQ96Q89 1820 aa11.05□□□□□ -0.64
NSD3-209ENST00000528828 GPR162Q16538 588 aa11.04□□□□□ -0.64
NSD3-209ENST00000528828 MSL1Q68DK7 614 aa11.04□□□□□ -0.64
NSD3-209ENST00000528828 SMIM5Q71RC9 77 aa11.04□□□□□ -0.64
NSD3-209ENST00000528828 AMIGO3Q86WK7 504 aa11.04□□□□□ -0.64
NSD3-209ENST00000528828 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
NSD3-209ENST00000528828 COL24A1Q17RW2 1714 aa11.04□□□□□ -0.64
NSD3-209ENST00000528828 CGNL1Q0VF96 1302 aa11.04□□□□□ -0.64
NSD3-209ENST00000528828 TULP1O00294 542 aaPredicted RBP11.03□□□□□ -0.64
NSD3-209ENST00000528828 POLD1P28340 1107 aa11.03□□□□□ -0.64
NSD3-209ENST00000528828 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
NSD3-209ENST00000528828 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
NSD3-209ENST00000528828 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
NSD3-209ENST00000528828 TOGARAM1Q9Y4F4 1720 aa11.03□□□□□ -0.64
NSD3-209ENST00000528828 PPM1GO15355 546 aaPredicted RBP11.03□□□□□ -0.64
NSD3-209ENST00000528828 PALLDQ8WX93 1383 aa11.02□□□□□ -0.64
NSD3-209ENST00000528828 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.65
NSD3-209ENST00000528828 CDCA8Q53HL2 280 aa11.02□□□□□ -0.65
NSD3-209ENST00000528828 IFNLR1Q8IU57 520 aaPredicted RBP11.02□□□□□ -0.65
NSD3-209ENST00000528828 SLAIN1Q8ND83 568 aa11.02□□□□□ -0.65
NSD3-209ENST00000528828 PIGBQ92521 554 aa11.02□□□□□ -0.65
NSD3-209ENST00000528828 EYA1Q99502 592 aa11.01□□□□□ -0.65
NSD3-209ENST00000528828 KIF24Q5T7B8 1368 aa11.01□□□□□ -0.65
NSD3-209ENST00000528828 C5P01031 1676 aa11□□□□□ -0.65
NSD3-209ENST00000528828 NCAPD2Q15021 1401 aa11□□□□□ -0.65
NSD3-209ENST00000528828 TNNT2P45379 298 aaPredicted RBP11□□□□□ -0.65
NSD3-209ENST00000528828 POLR3GLQ9BT43 218 aa11□□□□□ -0.65
NSD3-209ENST00000528828 POLKQ9UBT6 870 aa11□□□□□ -0.65
NSD3-209ENST00000528828 WASHC2AQ641Q2 1341 aa10.99□□□□□ -0.65
NSD3-209ENST00000528828 PKD1L3Q7Z443 1732 aa10.99□□□□□ -0.65
NSD3-209ENST00000528828 CHD4Q14839 1912 aa10.98□□□□□ -0.65
NSD3-209ENST00000528828 PHF14O94880 888 aa10.98□□□□□ -0.65
NSD3-209ENST00000528828 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
NSD3-209ENST00000528828 ERICH6Q7L0X2 663 aa10.98□□□□□ -0.65
NSD3-209ENST00000528828 PDCD7Q8N8D1 485 aaKnown RBP10.98□□□□□ -0.65
NSD3-209ENST00000528828 LINC00116Q8NCU8 138 aa10.98□□□□□ -0.65
NSD3-209ENST00000528828 SPOCK2Q92563 424 aa10.98□□□□□ -0.65
NSD3-209ENST00000528828 ITGB4P16144 1822 aa10.97□□□□□ -0.65
NSD3-209ENST00000528828 TAF1LQ8IZX4 1826 aa10.97□□□□□ -0.65
NSD3-209ENST00000528828 ANKRD26Q9UPS8 1709 aa10.97□□□□□ -0.65
NSD3-209ENST00000528828 C1QTNF8P60827 252 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms