RNA–Protein interactions for RNA: ENST00000528749.1

SETDB1-215, Transcript of SET domain bifurcated 1, humanhuman

TSL 3

Gene SETDB1, Length 527 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-215ENST00000528749 ATG3Q9NT62 314 aa9.73□□□□□ -0.85
SETDB1-215ENST00000528749 CICQ96RK0 1608 aaPredicted RBP9.73□□□□□ -0.85
SETDB1-215ENST00000528749 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.72□□□□□ -0.85
SETDB1-215ENST00000528749 ITPK1Q13572 414 aa9.72□□□□□ -0.85
SETDB1-215ENST00000528749 AMER1Q5JTC6 1135 aaPredicted RBP9.72□□□□□ -0.85
SETDB1-215ENST00000528749 AK7Q96M32 723 aa9.72□□□□□ -0.85
SETDB1-215ENST00000528749 ASAP1Q9ULH1 1129 aa9.72□□□□□ -0.85
SETDB1-215ENST00000528749 KDM6AO15550 1401 aaPredicted RBP9.72□□□□□ -0.85
SETDB1-215ENST00000528749 COL5A3P25940 1745 aaPredicted RBP9.71□□□□□ -0.85
SETDB1-215ENST00000528749 YBX3P16989 372 aaKnown RBP eCLIP9.71□□□□□ -0.86
SETDB1-215ENST00000528749 PLEKHO1Q53GL0 409 aaPredicted RBP9.71□□□□□ -0.86
SETDB1-215ENST00000528749 RC3H1Q5TC82 1133 aaKnown RBP9.71□□□□□ -0.86
SETDB1-215ENST00000528749 PPP4R3CPQ6ZMV5 832 aa9.71□□□□□ -0.86
SETDB1-215ENST00000528749 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
SETDB1-215ENST00000528749 IL13P35225 146 aa9.7□□□□□ -0.86
SETDB1-215ENST00000528749 TNNT2P45379 298 aaPredicted RBP9.7□□□□□ -0.86
SETDB1-215ENST00000528749 MORC1Q86VD1 984 aa9.7□□□□□ -0.86
SETDB1-215ENST00000528749 CCER1Q8TC90 406 aaPredicted RBP9.7□□□□□ -0.86
SETDB1-215ENST00000528749 SLC4A9Q96Q91 983 aa9.7□□□□□ -0.86
SETDB1-215ENST00000528749 KNSTRNQ9Y448 316 aa9.7□□□□□ -0.86
SETDB1-215ENST00000528749 CNTNAP4Q9C0A0 1308 aa9.7□□□□□ -0.86
SETDB1-215ENST00000528749 NPC1L1Q9UHC9 1359 aa9.7□□□□□ -0.86
SETDB1-215ENST00000528749 KIF13BQ9NQT8 1826 aa9.7□□□□□ -0.86
SETDB1-215ENST00000528749 ATP6V1AP38606 617 aa9.69□□□□□ -0.86
SETDB1-215ENST00000528749 KIF7Q2M1P5 1343 aa9.69□□□□□ -0.86
SETDB1-215ENST00000528749 MSL1Q68DK7 614 aa9.69□□□□□ -0.86
SETDB1-215ENST00000528749 MYH14Q7Z406 1995 aaKnown RBP9.68□□□□□ -0.86
SETDB1-215ENST00000528749 ADAMTS7Q9UKP4 1686 aa9.68□□□□□ -0.86
SETDB1-215ENST00000528749 ADCY9O60503 1353 aa9.68□□□□□ -0.86
SETDB1-215ENST00000528749 GNPATO15228 680 aa9.68□□□□□ -0.86
SETDB1-215ENST00000528749 ZNF530Q6P9A1 599 aaPredicted RBP9.68□□□□□ -0.86
SETDB1-215ENST00000528749 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
SETDB1-215ENST00000528749 POLR3GLQ9BT43 218 aa9.68□□□□□ -0.86
SETDB1-215ENST00000528749 SCN11AQ9UI33 1791 aa9.68□□□□□ -0.86
SETDB1-215ENST00000528749 MRC1P22897 1456 aa9.67□□□□□ -0.86
SETDB1-215ENST00000528749 C1QTNF8P60827 252 aa9.67□□□□□ -0.86
SETDB1-215ENST00000528749 KLHL34Q8N239 644 aa9.67□□□□□ -0.86
SETDB1-215ENST00000528749 NLGN1Q8N2Q7 840 aa9.67□□□□□ -0.86
SETDB1-215ENST00000528749 KIAA1551Q9HCM1 1747 aa9.67□□□□□ -0.86
SETDB1-215ENST00000528749 RPS6KA4O75676 772 aa9.66□□□□□ -0.86
SETDB1-215ENST00000528749 MTHFSP49914 203 aa9.66□□□□□ -0.86
SETDB1-215ENST00000528749 CABP4P57796 275 aa9.66□□□□□ -0.86
SETDB1-215ENST00000528749 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
SETDB1-215ENST00000528749 SULT6B1Q6IMI4 303 aa9.66□□□□□ -0.86
SETDB1-215ENST00000528749 RTCBQ9Y3I0 505 aaKnown RBP9.66□□□□□ -0.86
SETDB1-215ENST00000528749 C10orf71Q711Q0 1435 aa9.65□□□□□ -0.86
SETDB1-215ENST00000528749 PHF14O94880 888 aa9.65□□□□□ -0.86
SETDB1-215ENST00000528749 TGFB2P61812 414 aa9.65□□□□□ -0.86
SETDB1-215ENST00000528749 AKAP4Q5JQC9 854 aa9.65□□□□□ -0.86
SETDB1-215ENST00000528749 C1orf141Q5JVX7 400 aa9.65□□□□□ -0.86
SETDB1-215ENST00000528749 SMIM5Q71RC9 77 aa9.65□□□□□ -0.86
SETDB1-215ENST00000528749 NFATC2IPQ8NCF5 419 aa9.65□□□□□ -0.86
SETDB1-215ENST00000528749 PXDNLA1KZ92 1463 aa9.65□□□□□ -0.87
SETDB1-215ENST00000528749 C4AP0C0L4 1744 aa9.65□□□□□ -0.87
SETDB1-215ENST00000528749 TJP1Q07157 1748 aa9.65□□□□□ -0.87
SETDB1-215ENST00000528749 MMP10P09238 476 aa9.64□□□□□ -0.87
SETDB1-215ENST00000528749 GYS1P13807 737 aa9.64□□□□□ -0.87
SETDB1-215ENST00000528749 ARHGEF1Q92888 912 aaKnown RBP9.64□□□□□ -0.87
SETDB1-215ENST00000528749 COL3A1P02461 1466 aaPredicted RBP9.64□□□□□ -0.87
SETDB1-215ENST00000528749 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
SETDB1-215ENST00000528749 GIGYF1O75420 1035 aaPredicted RBP9.63□□□□□ -0.87
SETDB1-215ENST00000528749 PELP1Q8IZL8 1130 aaKnown RBP9.63□□□□□ -0.87
SETDB1-215ENST00000528749 RBM42Q9BTD8 480 aaKnown RBP9.63□□□□□ -0.87
SETDB1-215ENST00000528749 SLC52A2Q9HAB3 445 aa9.63□□□□□ -0.87
SETDB1-215ENST00000528749 BRCA1P38398 1863 aaKnown RBP9.63□□□□□ -0.87
SETDB1-215ENST00000528749 USP42Q9H9J4 1324 aaKnown RBP9.62□□□□□ -0.87
SETDB1-215ENST00000528749 CRKLP46109 303 aaKnown RBP9.62□□□□□ -0.87
SETDB1-215ENST00000528749 INTS5Q6P9B9 1019 aaKnown RBP9.62□□□□□ -0.87
SETDB1-215ENST00000528749 VSIG10Q8N0Z9 540 aa9.62□□□□□ -0.87
SETDB1-215ENST00000528749 UBR2Q8IWV8 1755 aa9.62□□□□□ -0.87
SETDB1-215ENST00000528749 KCPQ6ZWJ8 1503 aa9.61□□□□□ -0.87
SETDB1-215ENST00000528749 DIAPH1O60610 1272 aaKnown RBP9.61□□□□□ -0.87
SETDB1-215ENST00000528749 RFC4P35249 363 aa9.61□□□□□ -0.87
SETDB1-215ENST00000528749 VIRMAQ69YN4 1812 aaKnown RBP9.61□□□□□ -0.87
SETDB1-215ENST00000528749 RNMTO43148 476 aaKnown RBP9.6□□□□□ -0.87
SETDB1-215ENST00000528749 PTCD1O75127 700 aaKnown RBP9.6□□□□□ -0.87
SETDB1-215ENST00000528749 MTHFSDQ2M296 383 aaKnown RBP9.6□□□□□ -0.87
SETDB1-215ENST00000528749 LGR6Q9HBX8 967 aa9.6□□□□□ -0.87
SETDB1-215ENST00000528749 CCDC87Q9NVE4 849 aa9.6□□□□□ -0.87
SETDB1-215ENST00000528749 ARFGEF1Q9Y6D6 1849 aa9.6□□□□□ -0.87
SETDB1-215ENST00000528749 SOS1Q07889 1333 aaPredicted RBP9.59□□□□□ -0.87
SETDB1-215ENST00000528749 CYP19A1P11511 503 aaPredicted RBP9.59□□□□□ -0.87
SETDB1-215ENST00000528749 KCNA3P22001 575 aa9.59□□□□□ -0.87
SETDB1-215ENST00000528749 TM4SF1P30408 202 aa9.59□□□□□ -0.87
SETDB1-215ENST00000528749 NRXN2Q9P2S2 1712 aa9.59□□□□□ -0.87
SETDB1-215ENST00000528749 SIPA1L3O60292 1781 aaPredicted RBP9.58□□□□□ -0.88
SETDB1-215ENST00000528749 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
SETDB1-215ENST00000528749 HMOX1P09601 288 aa9.58□□□□□ -0.88
SETDB1-215ENST00000528749 DDR1Q08345 913 aa9.58□□□□□ -0.88
SETDB1-215ENST00000528749 FKBP8Q14318 412 aa9.58□□□□□ -0.88
SETDB1-215ENST00000528749 DNAJC10Q8IXB1 793 aa9.58□□□□□ -0.88
SETDB1-215ENST00000528749 GPBP1L1Q9HC44 474 aaPredicted RBP9.58□□□□□ -0.88
SETDB1-215ENST00000528749 NARFQ9UHQ1 456 aa9.58□□□□□ -0.88
SETDB1-215ENST00000528749 PARP3Q9Y6F1 533 aa9.58□□□□□ -0.88
SETDB1-215ENST00000528749 CEMIPQ8WUJ3 1361 aa9.58□□□□□ -0.88
SETDB1-215ENST00000528749 SENP3-EIF4A1A0A087X0R7 540 aa9.57□□□□□ -0.88
SETDB1-215ENST00000528749 A0A0G2JLW4 131 aa9.57□□□□□ -0.88
SETDB1-215ENST00000528749 POLRMTO00411 1230 aaKnown RBP9.57□□□□□ -0.88
SETDB1-215ENST00000528749 DPEP1P16444 411 aa9.57□□□□□ -0.88
SETDB1-215ENST00000528749 CC2D1BQ5T0F9 858 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms