RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 Q6ZVU0 165 aa13.06□□□□□ -0.32
COMMD9-205ENST00000528608 BANK1Q8NDB2 785 aa13.06□□□□□ -0.32
COMMD9-205ENST00000528608 IRF7Q92985 503 aa13.06□□□□□ -0.32
COMMD9-205ENST00000528608 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
COMMD9-205ENST00000528608 PCDHB9Q9Y5E1 797 aa13.04□□□□□ -0.32
COMMD9-205ENST00000528608 INSM1Q01101 510 aaPredicted RBP13.03□□□□□ -0.32
COMMD9-205ENST00000528608 TMPRSS4Q9NRS4 437 aa13.03□□□□□ -0.32
COMMD9-205ENST00000528608 DNMT3LQ9UJW3 386 aa13.03□□□□□ -0.32
COMMD9-205ENST00000528608 TTLL8A6PVC2 850 aa13.02□□□□□ -0.33
COMMD9-205ENST00000528608 FBXO45P0C2W1 286 aa13.02□□□□□ -0.33
COMMD9-205ENST00000528608 ESPNB1AK53 854 aa13.01□□□□□ -0.33
COMMD9-205ENST00000528608 PLCH2O75038 1416 aa13.01□□□□□ -0.33
COMMD9-205ENST00000528608 ERVH48-1M5A8F1 160 aa13□□□□□ -0.33
COMMD9-205ENST00000528608 APBB1O00213 710 aa13□□□□□ -0.33
COMMD9-205ENST00000528608 SPINT1O43278 529 aa13□□□□□ -0.33
COMMD9-205ENST00000528608 RELBQ01201 579 aa13□□□□□ -0.33
COMMD9-205ENST00000528608 ZNF784Q8NCA9 323 aaPredicted RBP13□□□□□ -0.33
COMMD9-205ENST00000528608 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
COMMD9-205ENST00000528608 AGBL1Q96MI9 1066 aa13□□□□□ -0.33
COMMD9-205ENST00000528608 NEO1Q92859 1461 aa12.99□□□□□ -0.33
COMMD9-205ENST00000528608 SOCS7O14512 581 aa12.99□□□□□ -0.33
COMMD9-205ENST00000528608 GMPRP36959 345 aa12.99□□□□□ -0.33
COMMD9-205ENST00000528608 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.99□□□□□ -0.33
COMMD9-205ENST00000528608 NDUFB9Q9Y6M9 179 aa12.99□□□□□ -0.33
COMMD9-205ENST00000528608 TIAM1Q13009 1591 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 ARAP3Q8WWN8 1544 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 FANCAO15360 1455 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 AKNAQ7Z591 1439 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 MTUS2Q5JR59 1369 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 RAPGEF3O95398 923 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 KANK4Q5T7N3 995 aaPredicted RBP12.98□□□□□ -0.33
COMMD9-205ENST00000528608 SEPT12Q8IYM1 358 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 MYO5CQ9NQX4 1742 aa12.98□□□□□ -0.33
COMMD9-205ENST00000528608 PHLDB1Q86UU1 1377 aa12.97□□□□□ -0.33
COMMD9-205ENST00000528608 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
COMMD9-205ENST00000528608 FIGNL2A6NMB9 653 aa12.97□□□□□ -0.33
COMMD9-205ENST00000528608 SNRKQ9NRH2 765 aa12.97□□□□□ -0.33
COMMD9-205ENST00000528608 NR1H3Q13133 447 aa12.96□□□□□ -0.33
COMMD9-205ENST00000528608 EFCAB2Q5VUJ9 269 aa12.96□□□□□ -0.33
COMMD9-205ENST00000528608 ADH1AP07327 375 aa12.95□□□□□ -0.34
COMMD9-205ENST00000528608 TRIM52Q96A61 297 aa12.95□□□□□ -0.34
COMMD9-205ENST00000528608 POLMQ9NP87 494 aaPredicted RBP12.95□□□□□ -0.34
COMMD9-205ENST00000528608 ZNF330Q9Y3S2 320 aaPredicted RBP12.95□□□□□ -0.34
COMMD9-205ENST00000528608 CDC42BPAQ5VT25 1732 aa12.95□□□□□ -0.34
COMMD9-205ENST00000528608 ARHGAP5Q13017 1502 aa12.94□□□□□ -0.34
COMMD9-205ENST00000528608 EHBP1L1Q8N3D4 1523 aa12.94□□□□□ -0.34
COMMD9-205ENST00000528608 GPATCH8Q9UKJ3 1502 aaKnown RBP12.94□□□□□ -0.34
COMMD9-205ENST00000528608 LRRC9Q6ZRR7 1453 aa12.94□□□□□ -0.34
COMMD9-205ENST00000528608 PPFIA3O75145 1194 aa12.94□□□□□ -0.34
COMMD9-205ENST00000528608 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-205ENST00000528608 INSM2Q96T92 566 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-205ENST00000528608 ZNF395Q9H8N7 513 aaPredicted RBP12.94□□□□□ -0.34
COMMD9-205ENST00000528608 CYLDQ9NQC7 956 aa12.94□□□□□ -0.34
COMMD9-205ENST00000528608 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
COMMD9-205ENST00000528608 MAP3K1Q13233 1512 aa12.93□□□□□ -0.34
COMMD9-205ENST00000528608 PREX2Q70Z35 1606 aa12.93□□□□□ -0.34
COMMD9-205ENST00000528608 LILRA1O75019 489 aa12.93□□□□□ -0.34
COMMD9-205ENST00000528608 ZNF592Q92610 1267 aa12.93□□□□□ -0.34
COMMD9-205ENST00000528608 STK17AQ9UEE5 414 aa12.93□□□□□ -0.34
COMMD9-205ENST00000528608 CFAP74Q9C0B2 1584 aa12.93□□□□□ -0.34
COMMD9-205ENST00000528608 CTSOP43234 321 aaPredicted RBP12.92□□□□□ -0.34
COMMD9-205ENST00000528608 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
COMMD9-205ENST00000528608 DENND4BO75064 1496 aaPredicted RBP12.91□□□□□ -0.34
COMMD9-205ENST00000528608 ADGRL1O94910 1474 aa12.91□□□□□ -0.34
COMMD9-205ENST00000528608 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
COMMD9-205ENST00000528608 ADD1P35611 737 aaKnown RBP12.91□□□□□ -0.34
COMMD9-205ENST00000528608 MCCD1P59942 119 aaPredicted RBP12.91□□□□□ -0.34
COMMD9-205ENST00000528608 PTSQ03393 145 aa12.91□□□□□ -0.34
COMMD9-205ENST00000528608 CCNB3Q8WWL7 1395 aa12.91□□□□□ -0.34
COMMD9-205ENST00000528608 NCOA2Q15596 1464 aa12.91□□□□□ -0.34
COMMD9-205ENST00000528608 RICTORQ6R327 1708 aa12.91□□□□□ -0.34
COMMD9-205ENST00000528608 ARHGEF12Q9NZN5 1544 aa12.9□□□□□ -0.34
COMMD9-205ENST00000528608 GPR37L1O60883 481 aa12.9□□□□□ -0.34
COMMD9-205ENST00000528608 VSIG8P0DPA2 414 aa12.9□□□□□ -0.34
COMMD9-205ENST00000528608 ZNF777Q9ULD5 760 aaPredicted RBP12.9□□□□□ -0.34
COMMD9-205ENST00000528608 SUPT6HQ7KZ85 1726 aaKnown RBP12.89□□□□□ -0.35
COMMD9-205ENST00000528608 PTGIRP43119 386 aa12.89□□□□□ -0.35
COMMD9-205ENST00000528608 RNF20Q5VTR2 975 aa12.89□□□□□ -0.35
COMMD9-205ENST00000528608 CCDC125Q86Z20 511 aa12.89□□□□□ -0.35
COMMD9-205ENST00000528608 CFDP1Q9UEE9 299 aaPredicted RBP12.89□□□□□ -0.35
COMMD9-205ENST00000528608 ZNF644Q9H582 1327 aaPredicted RBP12.88□□□□□ -0.35
COMMD9-205ENST00000528608 AFAP1Q8N556 730 aa12.88□□□□□ -0.35
COMMD9-205ENST00000528608 SAMD9LQ8IVG5 1584 aa12.88□□□□□ -0.35
COMMD9-205ENST00000528608 POGZQ7Z3K3 1410 aa12.88□□□□□ -0.35
COMMD9-205ENST00000528608 PRM3Q9NNZ6 103 aa12.87□□□□□ -0.35
COMMD9-205ENST00000528608 ABCC1P33527 1531 aa12.87□□□□□ -0.35
COMMD9-205ENST00000528608 TRAPPC8Q9Y2L5 1435 aa12.87□□□□□ -0.35
COMMD9-205ENST00000528608 RNF217Q8TC41 542 aa12.86□□□□□ -0.35
COMMD9-205ENST00000528608 HNRNPMP52272 730 aaKnown RBP eCLIP12.85□□□□□ -0.35
COMMD9-205ENST00000528608 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
COMMD9-205ENST00000528608 ITSN2Q9NZM3 1697 aa12.84□□□□□ -0.35
COMMD9-205ENST00000528608 CCDC155Q8N6L0 562 aa12.84□□□□□ -0.35
COMMD9-205ENST00000528608 KDF1Q8NAX2 398 aaPredicted RBP12.84□□□□□ -0.35
COMMD9-205ENST00000528608 ZSCAN1Q8NBB4 408 aa12.84□□□□□ -0.35
COMMD9-205ENST00000528608 YEATS2Q9ULM3 1422 aa12.84□□□□□ -0.35
COMMD9-205ENST00000528608 ZMYM4Q5VZL5 1548 aa12.83□□□□□ -0.35
COMMD9-205ENST00000528608 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
COMMD9-205ENST00000528608 FOXD4L5Q5VV16 416 aaPredicted RBP12.83□□□□□ -0.36
COMMD9-205ENST00000528608 CC2D2BQ6DHV5 1058 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms