RNA–Protein interactions for RNA: ENST00000528536.1

SIGIRR-214, Transcript of single Ig and TIR domain containing, humanhuman

TSL 3

Gene SIGIRR, Length 366 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGIRR-214ENST00000528536 KDM6AO15550 1401 aaPredicted RBP16.66■□□□□ 0.26
SIGIRR-214ENST00000528536 POLD1P28340 1107 aa16.66■□□□□ 0.26
SIGIRR-214ENST00000528536 SIK1P57059 783 aa16.66■□□□□ 0.26
SIGIRR-214ENST00000528536 VIRMAQ69YN4 1812 aaKnown RBP16.66■□□□□ 0.26
SIGIRR-214ENST00000528536 MAP3K5Q99683 1374 aa16.65■□□□□ 0.26
SIGIRR-214ENST00000528536 AK7Q96M32 723 aa16.65■□□□□ 0.26
SIGIRR-214ENST00000528536 ATG3Q9NT62 314 aa16.65■□□□□ 0.26
SIGIRR-214ENST00000528536 FHDC1Q9C0D6 1143 aaPredicted RBP16.64■□□□□ 0.25
SIGIRR-214ENST00000528536 ASAP1Q9ULH1 1129 aa16.64■□□□□ 0.25
SIGIRR-214ENST00000528536 ZNF831Q5JPB2 1677 aa16.64■□□□□ 0.25
SIGIRR-214ENST00000528536 MSH5O43196 834 aa16.63■□□□□ 0.25
SIGIRR-214ENST00000528536 ANP32CO43423 234 aa16.63■□□□□ 0.25
SIGIRR-214ENST00000528536 HMOX1P09601 288 aa16.63■□□□□ 0.25
SIGIRR-214ENST00000528536 CABP4P57796 275 aa16.63■□□□□ 0.25
SIGIRR-214ENST00000528536 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
SIGIRR-214ENST00000528536 SYT17Q9BSW7 474 aa16.63■□□□□ 0.25
SIGIRR-214ENST00000528536 ATP6V1AP38606 617 aa16.62■□□□□ 0.25
SIGIRR-214ENST00000528536 AKAP4Q5JQC9 854 aa16.62■□□□□ 0.25
SIGIRR-214ENST00000528536 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
SIGIRR-214ENST00000528536 SSFA2P28290 1259 aa16.6■□□□□ 0.25
SIGIRR-214ENST00000528536 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
SIGIRR-214ENST00000528536 LINC00116Q8NCU8 138 aa16.6■□□□□ 0.25
SIGIRR-214ENST00000528536 SCN11AQ9UI33 1791 aa16.59■□□□□ 0.25
SIGIRR-214ENST00000528536 UBR3Q6ZT12 1888 aa16.59■□□□□ 0.25
SIGIRR-214ENST00000528536 ITPK1Q13572 414 aa16.59■□□□□ 0.25
SIGIRR-214ENST00000528536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.58■□□□□ 0.24
SIGIRR-214ENST00000528536 NFATC2IPQ8NCF5 419 aa16.58■□□□□ 0.24
SIGIRR-214ENST00000528536 MRC1P22897 1456 aa16.58■□□□□ 0.24
SIGIRR-214ENST00000528536 ADAMTS7Q9UKP4 1686 aa16.57■□□□□ 0.24
SIGIRR-214ENST00000528536 RBM42Q9BTD8 480 aaKnown RBP16.57■□□□□ 0.24
SIGIRR-214ENST00000528536 RSPH6AQ9H0K4 717 aa16.57■□□□□ 0.24
SIGIRR-214ENST00000528536 COL5A3P25940 1745 aaPredicted RBP16.56■□□□□ 0.24
SIGIRR-214ENST00000528536 CICQ96RK0 1608 aaPredicted RBP16.56■□□□□ 0.24
SIGIRR-214ENST00000528536 GNPATO15228 680 aa16.56■□□□□ 0.24
SIGIRR-214ENST00000528536 FCHSD2O94868 740 aa16.56■□□□□ 0.24
SIGIRR-214ENST00000528536 PHF14O94880 888 aa16.56■□□□□ 0.24
SIGIRR-214ENST00000528536 MTHFSDQ2M296 383 aaKnown RBP16.56■□□□□ 0.24
SIGIRR-214ENST00000528536 DLG5Q8TDM6 1919 aa16.56■□□□□ 0.24
SIGIRR-214ENST00000528536 PRKAR2BP31323 418 aa16.55■□□□□ 0.24
SIGIRR-214ENST00000528536 RC3H1Q5TC82 1133 aaKnown RBP16.55■□□□□ 0.24
SIGIRR-214ENST00000528536 KLHL34Q8N239 644 aa16.55■□□□□ 0.24
SIGIRR-214ENST00000528536 SLC4A9Q96Q91 983 aa16.55■□□□□ 0.24
SIGIRR-214ENST00000528536 SLC52A2Q9HAB3 445 aa16.55■□□□□ 0.24
SIGIRR-214ENST00000528536 CNTNAP4Q9C0A0 1308 aa16.54■□□□□ 0.24
SIGIRR-214ENST00000528536 RNMTO43148 476 aaKnown RBP16.54■□□□□ 0.24
SIGIRR-214ENST00000528536 MSL1Q68DK7 614 aa16.54■□□□□ 0.24
SIGIRR-214ENST00000528536 AMIGO3Q86WK7 504 aa16.54■□□□□ 0.24
SIGIRR-214ENST00000528536 GAS2L2Q8NHY3 880 aa16.54■□□□□ 0.24
SIGIRR-214ENST00000528536 RTCBQ9Y3I0 505 aaKnown RBP16.54■□□□□ 0.24
SIGIRR-214ENST00000528536 NEFMP07197 916 aa16.53■□□□□ 0.24
SIGIRR-214ENST00000528536 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.24
SIGIRR-214ENST00000528536 PNNQ9H307 717 aaKnown RBP16.53■□□□□ 0.24
SIGIRR-214ENST00000528536 PTCD1O75127 700 aaKnown RBP16.52■□□□□ 0.24
SIGIRR-214ENST00000528536 ADRA2BP18089 450 aa16.52■□□□□ 0.24
SIGIRR-214ENST00000528536 YY1P25490 414 aa16.52■□□□□ 0.24
SIGIRR-214ENST00000528536 LGR6Q9HBX8 967 aa16.52■□□□□ 0.24
SIGIRR-214ENST00000528536 TJP1Q07157 1748 aa16.51■□□□□ 0.23
SIGIRR-214ENST00000528536 TRAPPC3LQ5T215 181 aa16.51■□□□□ 0.23
SIGIRR-214ENST00000528536 GNAT3A8MTJ3 354 aa16.5■□□□□ 0.23
SIGIRR-214ENST00000528536 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
SIGIRR-214ENST00000528536 CD2APQ9Y5K6 639 aa16.5■□□□□ 0.23
SIGIRR-214ENST00000528536 MAPK8IP3Q9UPT6 1336 aa16.49■□□□□ 0.23
SIGIRR-214ENST00000528536 RPS6KA4O75676 772 aa16.49■□□□□ 0.23
SIGIRR-214ENST00000528536 SMIM5Q71RC9 77 aa16.49■□□□□ 0.23
SIGIRR-214ENST00000528536 GPR162Q16538 588 aa16.48■□□□□ 0.23
SIGIRR-214ENST00000528536 NLGN2Q8NFZ4 835 aa16.48■□□□□ 0.23
SIGIRR-214ENST00000528536 MRS2Q9HD23 443 aa16.48■□□□□ 0.23
SIGIRR-214ENST00000528536 KCPQ6ZWJ8 1503 aa16.48■□□□□ 0.23
SIGIRR-214ENST00000528536 SIPA1L3O60292 1781 aaPredicted RBP16.47■□□□□ 0.23
SIGIRR-214ENST00000528536 RFC4P35249 363 aa16.47■□□□□ 0.23
SIGIRR-214ENST00000528536 TEFQ10587 303 aa16.47■□□□□ 0.23
SIGIRR-214ENST00000528536 NLGN1Q8N2Q7 840 aa16.47■□□□□ 0.23
SIGIRR-214ENST00000528536 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
SIGIRR-214ENST00000528536 UBR2Q8IWV8 1755 aa16.46■□□□□ 0.23
SIGIRR-214ENST00000528536 C4AP0C0L4 1744 aa16.46■□□□□ 0.23
SIGIRR-214ENST00000528536 CRKLP46109 303 aaKnown RBP16.46■□□□□ 0.23
SIGIRR-214ENST00000528536 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
SIGIRR-214ENST00000528536 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
SIGIRR-214ENST00000528536 ARHGEF1Q92888 912 aaKnown RBP16.46■□□□□ 0.23
SIGIRR-214ENST00000528536 ADAMTS8Q9UP79 889 aa16.46■□□□□ 0.23
SIGIRR-214ENST00000528536 UTRNP46939 3433 aa16.45■□□□□ 0.22
SIGIRR-214ENST00000528536 SLC39A6Q13433 755 aa16.45■□□□□ 0.22
SIGIRR-214ENST00000528536 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
SIGIRR-214ENST00000528536 DNAJC10Q8IXB1 793 aa16.45■□□□□ 0.22
SIGIRR-214ENST00000528536 TTC5Q8N0Z6 440 aa16.45■□□□□ 0.22
SIGIRR-214ENST00000528536 CEMIPQ8WUJ3 1361 aa16.44■□□□□ 0.22
SIGIRR-214ENST00000528536 PELP1Q8IZL8 1130 aaKnown RBP16.44■□□□□ 0.22
SIGIRR-214ENST00000528536 IL17REQ8NFR9 667 aa16.44■□□□□ 0.22
SIGIRR-214ENST00000528536 MMP10P09238 476 aa16.43■□□□□ 0.22
SIGIRR-214ENST00000528536 GYS1P13807 737 aa16.43■□□□□ 0.22
SIGIRR-214ENST00000528536 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
SIGIRR-214ENST00000528536 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
SIGIRR-214ENST00000528536 RTF1Q92541 710 aaKnown RBP16.43■□□□□ 0.22
SIGIRR-214ENST00000528536 RUNDC1Q96C34 613 aa16.43■□□□□ 0.22
SIGIRR-214ENST00000528536 CCDC87Q9NVE4 849 aa16.43■□□□□ 0.22
SIGIRR-214ENST00000528536 MYH14Q7Z406 1995 aaKnown RBP16.42■□□□□ 0.22
SIGIRR-214ENST00000528536 HTATSF1O43719 755 aaKnown RBP16.42■□□□□ 0.22
SIGIRR-214ENST00000528536 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
SIGIRR-214ENST00000528536 CYP19A1P11511 503 aaPredicted RBP16.42■□□□□ 0.22
SIGIRR-214ENST00000528536 CCDC146Q8IYE0 955 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms