RNA–Protein interactions for RNA: ENST00000528498.5

RDX-204, Transcript of radixin, humanhuman

TSL 1 (best) BASIC

Gene RDX, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-204ENST00000528498 STK31Q9BXU1 1019 aa27.48■■□□□ 1.99
RDX-204ENST00000528498 CCDC30Q5VVM6 783 aa27.47■■□□□ 1.99
RDX-204ENST00000528498 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
RDX-204ENST00000528498 EIF2S2P20042 333 aaKnown RBP27.46■■□□□ 1.99
RDX-204ENST00000528498 SMC5Q8IY18 1101 aa27.46■■□□□ 1.99
RDX-204ENST00000528498 TATP17735 454 aaPredicted RBP27.46■■□□□ 1.99
RDX-204ENST00000528498 FAM161AQ3B820 660 aa27.46■■□□□ 1.99
RDX-204ENST00000528498 IPO9Q96P70 1041 aaKnown RBP27.46■■□□□ 1.99
RDX-204ENST00000528498 HDGFL1Q5TGJ6 251 aa27.45■■□□□ 1.99
RDX-204ENST00000528498 NHSL1Q5SYE7 1610 aa27.44■■□□□ 1.98
RDX-204ENST00000528498 FLIIQ13045 1269 aa27.44■■□□□ 1.98
RDX-204ENST00000528498 MEIS3Q99687 375 aa27.43■■□□□ 1.98
RDX-204ENST00000528498 ABCA3Q99758 1704 aa27.43■■□□□ 1.98
RDX-204ENST00000528498 PHAXQ9H814 394 aaKnown RBP27.43■■□□□ 1.98
RDX-204ENST00000528498 FKBP5Q13451 457 aaPredicted RBP27.42■■□□□ 1.98
RDX-204ENST00000528498 KDM6AO15550 1401 aaPredicted RBP27.42■■□□□ 1.98
RDX-204ENST00000528498 PRAMEF22A3QJZ6 481 aa27.42■■□□□ 1.98
RDX-204ENST00000528498 PHKG2P15735 406 aa27.41■■□□□ 1.98
RDX-204ENST00000528498 ANXA1P04083 346 aa27.41■■□□□ 1.98
RDX-204ENST00000528498 ABCC6O95255 1503 aa27.41■■□□□ 1.98
RDX-204ENST00000528498 CYP27B1O15528 508 aa27.4■■□□□ 1.98
RDX-204ENST00000528498 CHMP4BQ9H444 224 aaKnown RBP27.4■■□□□ 1.98
RDX-204ENST00000528498 SIPA1L3O60292 1781 aaPredicted RBP27.39■■□□□ 1.98
RDX-204ENST00000528498 TOM1L2Q6ZVM7 507 aa27.39■■□□□ 1.97
RDX-204ENST00000528498 SPG7Q9UQ90 795 aa27.39■■□□□ 1.97
RDX-204ENST00000528498 SLC39A6Q13433 755 aa27.38■■□□□ 1.97
RDX-204ENST00000528498 CHPF2Q9P2E5 772 aa27.38■■□□□ 1.97
RDX-204ENST00000528498 ADAMTS7Q9UKP4 1686 aa27.38■■□□□ 1.97
RDX-204ENST00000528498 LNPKQ9C0E8 428 aa27.38■■□□□ 1.97
RDX-204ENST00000528498 COL5A2P05997 1499 aaPredicted RBP27.38■■□□□ 1.97
RDX-204ENST00000528498 WDR17Q8IZU2 1322 aa27.38■■□□□ 1.97
RDX-204ENST00000528498 STRN4Q9NRL3 753 aa27.37■■□□□ 1.97
RDX-204ENST00000528498 CACNA1FO60840 1977 aa27.37■■□□□ 1.97
RDX-204ENST00000528498 OVOS2A0A0G2JMS6 1433 aa27.37■■□□□ 1.97
RDX-204ENST00000528498 ATP10DQ9P241 1426 aa27.36■■□□□ 1.97
RDX-204ENST00000528498 SOS1Q07889 1333 aaPredicted RBP27.36■■□□□ 1.97
RDX-204ENST00000528498 NFATC2IPQ8NCF5 419 aa27.36■■□□□ 1.97
RDX-204ENST00000528498 SCN11AQ9UI33 1791 aa27.36■■□□□ 1.97
RDX-204ENST00000528498 ZBTB47Q9UFB7 747 aaPredicted RBP27.35■■□□□ 1.97
RDX-204ENST00000528498 NUCB1Q02818 461 aa27.35■■□□□ 1.97
RDX-204ENST00000528498 IFNL2Q8IZJ0 200 aa27.35■■□□□ 1.97
RDX-204ENST00000528498 LARP1Q6PKG0 1096 aaKnown RBP27.34■■□□□ 1.97
RDX-204ENST00000528498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.34■■□□□ 1.974e-7■■■□□ 17.5
RDX-204ENST00000528498 GIGYF1O75420 1035 aaPredicted RBP27.34■■□□□ 1.97
RDX-204ENST00000528498 SEC24BO95487 1268 aa27.33■■□□□ 1.97
RDX-204ENST00000528498 SLC52A2Q9HAB3 445 aa27.33■■□□□ 1.97
RDX-204ENST00000528498 ROBO1Q9Y6N7 1651 aa27.33■■□□□ 1.97
RDX-204ENST00000528498 ANKRD45Q5TZF3 282 aa27.33■■□□□ 1.97
RDX-204ENST00000528498 CCT4P50991 539 aaKnown RBP27.32■■□□□ 1.96
RDX-204ENST00000528498 CEP85Q6P2H3 762 aa27.32■■□□□ 1.96
RDX-204ENST00000528498 CHD1LQ86WJ1 897 aa27.32■■□□□ 1.96
RDX-204ENST00000528498 PKD1L3Q7Z443 1732 aa27.32■■□□□ 1.96
RDX-204ENST00000528498 PROSER3Q2NL68 480 aa27.31■■□□□ 1.96
RDX-204ENST00000528498 BCL11AQ9H165 835 aa27.31■■□□□ 1.96
RDX-204ENST00000528498 HEG1Q9ULI3 1381 aa27.31■■□□□ 1.96
RDX-204ENST00000528498 HOXB7P09629 217 aa27.3■■□□□ 1.96
RDX-204ENST00000528498 USP35Q9P2H5 1018 aa27.3■■□□□ 1.96
RDX-204ENST00000528498 LTBP4Q8N2S1 1624 aa27.3■■□□□ 1.96
RDX-204ENST00000528498 ZNF790Q6PG37 636 aa27.29■■□□□ 1.96
RDX-204ENST00000528498 ANKRD44Q8N8A2 993 aa27.29■■□□□ 1.96
RDX-204ENST00000528498 GCC1Q96CN9 775 aa27.29■■□□□ 1.96
RDX-204ENST00000528498 EVA1CP58658 441 aa27.27■■□□□ 1.96
RDX-204ENST00000528498 DCAF5Q96JK2 942 aa27.27■■□□□ 1.96
RDX-204ENST00000528498 PI4KAP2A4QPH2 592 aa27.25■■□□□ 1.95
RDX-204ENST00000528498 PI4KAP1Q8N8J0 262 aa27.25■■□□□ 1.95
RDX-204ENST00000528498 ZCRB1Q8TBF4 217 aaKnown RBP27.25■■□□□ 1.95
RDX-204ENST00000528498 CARD10Q9BWT7 1032 aa27.25■■□□□ 1.95
RDX-204ENST00000528498 BTG4Q9NY30 223 aa27.25■■□□□ 1.95
RDX-204ENST00000528498 ZNF496Q96IT1 587 aaPredicted RBP27.24■■□□□ 1.95
RDX-204ENST00000528498 DCTPP1Q9H773 170 aa27.24■■□□□ 1.95
RDX-204ENST00000528498 RPAP2Q8IXW5 612 aaPredicted RBP27.24■■□□□ 1.95
RDX-204ENST00000528498 DBF4Q9UBU7 674 aaPredicted RBP27.23■■□□□ 1.95
RDX-204ENST00000528498 C5P01031 1676 aa27.22■■□□□ 1.95
RDX-204ENST00000528498 PARP4Q9UKK3 1724 aaKnown RBP27.22■■□□□ 1.95
RDX-204ENST00000528498 APBB1O00213 710 aa27.22■■□□□ 1.95
RDX-204ENST00000528498 IL2RBP14784 551 aa27.22■■□□□ 1.95
RDX-204ENST00000528498 USP44Q9H0E7 712 aa27.22■■□□□ 1.95
RDX-204ENST00000528498 DDX54Q8TDD1 881 aaKnown RBP27.22■■□□□ 1.95
RDX-204ENST00000528498 ADCY9O60503 1353 aa27.21■■□□□ 1.95
RDX-204ENST00000528498 CABP4P57796 275 aa27.21■■□□□ 1.95
RDX-204ENST00000528498 MRC1P22897 1456 aa27.2■■□□□ 1.94
RDX-204ENST00000528498 GNAI2P04899 355 aa27.2■■□□□ 1.94
RDX-204ENST00000528498 NBR1Q14596 966 aa27.2■■□□□ 1.94
RDX-204ENST00000528498 N4BP2Q86UW6 1770 aaPredicted RBP27.19■■□□□ 1.94
RDX-204ENST00000528498 PIP4K2AP48426 406 aaPredicted RBP27.19■■□□□ 1.94
RDX-204ENST00000528498 PDIA6Q15084 440 aa27.19■■□□□ 1.94
RDX-204ENST00000528498 C16orf71Q8IYS4 520 aaPredicted RBP27.19■■□□□ 1.94
RDX-204ENST00000528498 DNAAF4Q8WXU2 420 aa27.19■■□□□ 1.94
RDX-204ENST00000528498 PCDH11XQ9BZA7 1347 aa27.19■■□□□ 1.94
RDX-204ENST00000528498 PCDH11YQ9BZA8 1340 aa27.19■■□□□ 1.94
RDX-204ENST00000528498 SMARCA5O60264 1052 aaPredicted RBP27.18■■□□□ 1.94
RDX-204ENST00000528498 LRRFIP2Q9Y608 721 aaKnown RBP27.18■■□□□ 1.94
RDX-204ENST00000528498 PXDNLA1KZ92 1463 aa27.18■■□□□ 1.94
RDX-204ENST00000528498 SHANK3Q9BYB0 1731 aa27.17■■□□□ 1.94
RDX-204ENST00000528498 HSP90AB1P08238 724 aaKnown RBP27.17■■□□□ 1.94
RDX-204ENST00000528498 USP16Q9Y5T5 823 aa27.17■■□□□ 1.94
RDX-204ENST00000528498 AHDC1Q5TGY3 1603 aaPredicted RBP27.17■■□□□ 1.94
RDX-204ENST00000528498 PLEKHG2Q9H7P9 1386 aa27.17■■□□□ 1.94
RDX-204ENST00000528498 PNMA6EA0A0J9YXQ4 647 aa27.17■■□□□ 1.94
RDX-204ENST00000528498 BEND3Q5T5X7 828 aa27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms