RNA–Protein interactions for RNA: ENST00000528414.5

PTPN22-207, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-207ENST00000528414 KIAA1522Q9P206 1035 aaPredicted RBP4.84□□□□□ -1.63
PTPN22-207ENST00000528414 PEX14O75381 377 aa4.84□□□□□ -1.64
PTPN22-207ENST00000528414 ARMCX6Q7L4S7 300 aa4.84□□□□□ -1.64
PTPN22-207ENST00000528414 LRRC37AA6NMS7 1700 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 TNS2Q63HR2 1409 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 KIAA0232Q92628 1395 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 POLD1P28340 1107 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 CEBPAP49715 358 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-207ENST00000528414 GIMAP6Q6P9H5 292 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 CCER1Q8TC90 406 aaPredicted RBP4.83□□□□□ -1.64
PTPN22-207ENST00000528414 BORCS6Q96GS4 357 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 ITGB4P16144 1822 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 SPATA31A3Q5VYP0 1347 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 ANKRD62A6NC57 917 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 ERCC3P19447 782 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 DDX46Q7L014 1031 aaKnown RBP4.83□□□□□ -1.64
PTPN22-207ENST00000528414 MKL1Q969V6 931 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 USP31Q70CQ4 1352 aa4.83□□□□□ -1.64
PTPN22-207ENST00000528414 ECM2O94769 699 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-207ENST00000528414 SCP2P22307 547 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 GORABQ5T7V8 394 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 NGEFQ8N5V2 710 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 PSME4Q14997 1843 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 KIF24Q5T7B8 1368 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 VGLL3A8MV65 326 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 HS6ST3Q8IZP7 471 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 CACTIN-AS1Q8N1I8 211 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 TJP1Q07157 1748 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 PPP1R15AO75807 674 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-207ENST00000528414 LONRF3Q496Y0 759 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 MAF1Q9H063 256 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 CFDP1Q9UEE9 299 aaPredicted RBP4.82□□□□□ -1.64
PTPN22-207ENST00000528414 PNMA2Q9UL42 364 aa4.82□□□□□ -1.64
PTPN22-207ENST00000528414 PAX3P23760 479 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 NBPF9Q3BBW0 867 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 CASC1Q6TDU7 716 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 ZNF609O15014 1411 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 MRC1P22897 1456 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 GOLGA6CA6NDK9 693 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 GOLGA6BA6NDN3 693 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 PLSCR1O15162 318 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 GOLGA6DP0CG33 693 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 ATL2Q8NHH9 583 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 GPATCH3Q96I76 525 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 GOLGA6AQ9NYA3 693 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 LAMB2P55268 1798 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 AFF2P51816 1311 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 EXOC5O00471 708 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 ARID4AP29374 1257 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-207ENST00000528414 HSP90AA2PQ14568 343 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-207ENST00000528414 JMYQ8N9B5 988 aa4.81□□□□□ -1.64
PTPN22-207ENST00000528414 CDCA7Q9BWT1 371 aaPredicted RBP4.81□□□□□ -1.64
PTPN22-207ENST00000528414 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPN22-207ENST00000528414 ERBB3P21860 1342 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 WASHC2CQ9Y4E1 1318 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 EPB41L2O43491 1005 aaKnown RBP4.8□□□□□ -1.64
PTPN22-207ENST00000528414 APLP1P51693 650 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 GET4Q7L5D6 327 aaPredicted RBP4.8□□□□□ -1.64
PTPN22-207ENST00000528414 ESF1Q9H501 851 aaKnown RBP4.8□□□□□ -1.64
PTPN22-207ENST00000528414 ZRANB1Q9UGI0 708 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 NPHP3Q7Z494 1330 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 FER1L6Q2WGJ9 1857 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 APPP05067 770 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 ANKRD23Q86SG2 305 aa4.8□□□□□ -1.64
PTPN22-207ENST00000528414 FOSBP53539 338 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 WDR70Q9NW82 654 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 PAPPA2Q9BXP8 1791 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 DHX16O60231 1041 aaKnown RBP4.79□□□□□ -1.64
PTPN22-207ENST00000528414 CHGAP10645 457 aaKnown RBP4.79□□□□□ -1.64
PTPN22-207ENST00000528414 VTI1AQ96AJ9 217 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 CAMKK2Q96RR4 588 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 UBA5Q9GZZ9 404 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 SPATA31A5Q5VU36 1347 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 SPATA31A7Q8IWB4 1347 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 MTA1Q13330 715 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 ZNF280DQ6N043 979 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 PMM1Q92871 262 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 KLHL42Q9P2K6 505 aa4.79□□□□□ -1.64
PTPN22-207ENST00000528414 PARNO95453 639 aaKnown RBP4.78□□□□□ -1.64
PTPN22-207ENST00000528414 RGS19P49795 217 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 ZFYVE27Q5T4F4 411 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 LAMB4A4D0S4 1761 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 METP08581 1390 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 KIF4AO95239 1232 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 NKX1-1Q15270 411 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-207ENST00000528414 CSPP1Q1MSJ5 1256 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 NBPF10Q6P3W6 841 aaKnown RBP4.78□□□□□ -1.64
PTPN22-207ENST00000528414 TRIM44Q96DX7 344 aaPredicted RBP4.78□□□□□ -1.64
PTPN22-207ENST00000528414 ROBO2Q9HCK4 1378 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 TCERG1O14776 1098 aaKnown RBP4.78□□□□□ -1.64
PTPN22-207ENST00000528414 CC2D1BQ5T0F9 858 aaKnown RBP4.78□□□□□ -1.64
PTPN22-207ENST00000528414 UNC5CLQ8IV45 518 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 NUB1Q9Y5A7 615 aa4.78□□□□□ -1.64
PTPN22-207ENST00000528414 RIC1Q4ADV7 1423 aa4.77□□□□□ -1.65
PTPN22-207ENST00000528414 CREB3O43889 395 aa4.77□□□□□ -1.65
PTPN22-207ENST00000528414 PRR29P0C7W0 189 aa4.77□□□□□ -1.65
PTPN22-207ENST00000528414 SMC5Q8IY18 1101 aa4.77□□□□□ -1.65
PTPN22-207ENST00000528414 YTHDC1Q96MU7 727 aaKnown RBP4.77□□□□□ -1.65
PTPN22-207ENST00000528414 A6NJR5 290 aa4.77□□□□□ -1.65
PTPN22-207ENST00000528414 ZNF500O60304 480 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms