RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RNMT	O43148	476 aa	Known RBP	15.78	■□□□□ 0.12
PSMC3-205	ENST00000528362	ATP6V1A	P38606	617 aa		15.78	■□□□□ 0.12
PSMC3-205	ENST00000528362	RSPH6A	Q9H0K4	717 aa		15.78	■□□□□ 0.12
PSMC3-205	ENST00000528362	SLC52A2	Q9HAB3	445 aa		15.78	■□□□□ 0.12
PSMC3-205	ENST00000528362	NUDC	Q9Y266	331 aa		15.78	■□□□□ 0.12
PSMC3-205	ENST00000528362	PRKAR2B	P31323	418 aa		15.77	■□□□□ 0.12
PSMC3-205	ENST00000528362	DDX10	Q13206	875 aa	Known RBP	15.77	■□□□□ 0.12
PSMC3-205	ENST00000528362	SMIM5	Q71RC9	77 aa		15.77	■□□□□ 0.12
PSMC3-205	ENST00000528362	RBM42	Q9BTD8	480 aa	Known RBP	15.77	■□□□□ 0.12
PSMC3-205	ENST00000528362	MRC1	P22897	1456 aa		15.77	■□□□□ 0.11
PSMC3-205	ENST00000528362	C5	P01031	1676 aa		15.76	■□□□□ 0.11
PSMC3-205	ENST00000528362	MSH5	O43196	834 aa		15.76	■□□□□ 0.11
PSMC3-205	ENST00000528362	U2AF1L5	P0DN76	240 aa	Predicted RBP	15.76	■□□□□ 0.11
PSMC3-205	ENST00000528362	U2AF1	Q01081	240 aa	Known RBP eCLIP	15.76	■□□□□ 0.11
PSMC3-205	ENST00000528362	GAS2L2	Q8NHY3	880 aa		15.76	■□□□□ 0.11
PSMC3-205	ENST00000528362	ARX	Q96QS3	562 aa		15.76	■□□□□ 0.11
PSMC3-205	ENST00000528362	FHDC1	Q9C0D6	1143 aa	Predicted RBP	15.76	■□□□□ 0.11
PSMC3-205	ENST00000528362	C4B	P0C0L5	1744 aa		15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	QSER1	Q2KHR3	1735 aa		15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	PTCD1	O75127	700 aa	Known RBP	15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	PHF14	O94880	888 aa		15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	FLAD1	Q8NFF5	587 aa		15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	PHACTR3	Q96KR7	559 aa		15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	MAP3K5	Q99683	1374 aa		15.75	■□□□□ 0.11
PSMC3-205	ENST00000528362	TUBGCP6	Q96RT7	1819 aa		15.74	■□□□□ 0.11
PSMC3-205	ENST00000528362	GNPAT	O15228	680 aa		15.74	■□□□□ 0.11
PSMC3-205	ENST00000528362	MSL1	Q68DK7	614 aa		15.74	■□□□□ 0.11
PSMC3-205	ENST00000528362	GNAT3	A8MTJ3	354 aa		15.73	■□□□□ 0.11
PSMC3-205	ENST00000528362	SSFA2	P28290	1259 aa		15.73	■□□□□ 0.11
PSMC3-205	ENST00000528362	POLD1	P28340	1107 aa		15.73	■□□□□ 0.11
PSMC3-205	ENST00000528362	FCHSD2	O94868	740 aa		15.72	■□□□□ 0.11
PSMC3-205	ENST00000528362	ZEB1	P37275	1124 aa	Predicted RBP	15.72	■□□□□ 0.11
PSMC3-205	ENST00000528362	SLC39A6	Q13433	755 aa		15.72	■□□□□ 0.11
PSMC3-205	ENST00000528362	IL17RE	Q8NFR9	667 aa		15.72	■□□□□ 0.11
PSMC3-205	ENST00000528362	SYT17	Q9BSW7	474 aa		15.72	■□□□□ 0.11
PSMC3-205	ENST00000528362	CNTNAP4	Q9C0A0	1308 aa		15.71	■□□□□ 0.11
PSMC3-205	ENST00000528362	ADAMTS7	Q9UKP4	1686 aa		15.71	■□□□□ 0.11
PSMC3-205	ENST00000528362	RALBP1	Q15311	655 aa		15.71	■□□□□ 0.11
PSMC3-205	ENST00000528362	RC3H1	Q5TC82	1133 aa	Known RBP	15.71	■□□□□ 0.11
PSMC3-205	ENST00000528362	TAF1L	Q8IZX4	1826 aa		15.71	■□□□□ 0.1
PSMC3-205	ENST00000528362	CEMIP	Q8WUJ3	1361 aa		15.7	■□□□□ 0.1
PSMC3-205	ENST00000528362	RTCB	Q9Y3I0	505 aa	Known RBP	15.69	■□□□□ 0.1
PSMC3-205	ENST00000528362	SCN11A	Q9UI33	1791 aa		15.68	■□□□□ 0.1
PSMC3-205	ENST00000528362	ZNF831	Q5JPB2	1677 aa		15.68	■□□□□ 0.1
PSMC3-205	ENST00000528362	CRKL	P46109	303 aa	Known RBP	15.68	■□□□□ 0.1
PSMC3-205	ENST00000528362	TEF	Q10587	303 aa		15.68	■□□□□ 0.1
PSMC3-205	ENST00000528362	KCP	Q6ZWJ8	1503 aa		15.68	■□□□□ 0.1
PSMC3-205	ENST00000528362	RPS6KA4	O75676	772 aa		15.67	■□□□□ 0.1
PSMC3-205	ENST00000528362	ADRA2B	P18089	450 aa		15.67	■□□□□ 0.1
PSMC3-205	ENST00000528362	DNAJC10	Q8IXB1	793 aa		15.67	■□□□□ 0.1
PSMC3-205	ENST00000528362	COL24A1	Q17RW2	1714 aa		15.67	■□□□□ 0.1
PSMC3-205	ENST00000528362	MYBBP1A	Q9BQG0	1328 aa	Known RBP	15.67	■□□□□ 0.1
PSMC3-205	ENST00000528362	UBR3	Q6ZT12	1888 aa		15.66	■□□□□ 0.1
PSMC3-205	ENST00000528362	INTS5	Q6P9B9	1019 aa	Known RBP	15.66	■□□□□ 0.1
PSMC3-205	ENST00000528362	KLHL34	Q8N239	644 aa		15.66	■□□□□ 0.1
PSMC3-205	ENST00000528362	ARHGEF1	Q92888	912 aa	Known RBP	15.66	■□□□□ 0.1
PSMC3-205	ENST00000528362	PLEKHF1	Q96S99	279 aa		15.66	■□□□□ 0.1
PSMC3-205	ENST00000528362	YY1	P25490	414 aa		15.65	■□□□□ 0.1
PSMC3-205	ENST00000528362	TRAPPC3L	Q5T215	181 aa		15.65	■□□□□ 0.1
PSMC3-205	ENST00000528362	CYP19A1	P11511	503 aa	Predicted RBP	15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	ZNF790	Q6PG37	636 aa		15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	MCM10	Q7L590	875 aa		15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	TTC5	Q8N0Z6	440 aa		15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	VSIG10	Q8N0Z9	540 aa		15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	NLGN2	Q8NFZ4	835 aa		15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	ZNF496	Q96IT1	587 aa	Predicted RBP	15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	CIC	Q96RK0	1608 aa	Predicted RBP	15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	UTRN	P46939	3433 aa		15.64	■□□□□ 0.09
PSMC3-205	ENST00000528362	GOLGB1	Q14789	3259 aa	Known RBP	15.63	■□□□□ 0.09
PSMC3-205	ENST00000528362	COL5A3	P25940	1745 aa	Predicted RBP	15.63	■□□□□ 0.09
PSMC3-205	ENST00000528362	DCTN1	Q14203	1278 aa		15.63	■□□□□ 0.09
PSMC3-205	ENST00000528362	RTF1	Q92541	710 aa	Known RBP	15.63	■□□□□ 0.09
PSMC3-205	ENST00000528362	CCDC87	Q9NVE4	849 aa		15.63	■□□□□ 0.09
PSMC3-205	ENST00000528362	TJP1	Q07157	1748 aa		15.63	■□□□□ 0.09
PSMC3-205	ENST00000528362	DCAF8L1	A6NGE4	600 aa		15.62	■□□□□ 0.09
PSMC3-205	ENST00000528362	KCNQ3	O43525	872 aa		15.62	■□□□□ 0.09
PSMC3-205	ENST00000528362	HTATSF1	O43719	755 aa	Known RBP	15.62	■□□□□ 0.09
PSMC3-205	ENST00000528362	GYS1	P13807	737 aa		15.62	■□□□□ 0.09
PSMC3-205	ENST00000528362	RFC4	P35249	363 aa		15.62	■□□□□ 0.09
PSMC3-205	ENST00000528362	PRKRIP1	Q9H875	184 aa	Predicted RBP	15.62	■□□□□ 0.09
PSMC3-205	ENST00000528362	HEG1	Q9ULI3	1381 aa		15.62	■□□□□ 0.09
PSMC3-205	ENST00000528362	MMP10	P09238	476 aa		15.61	■□□□□ 0.09
PSMC3-205	ENST00000528362	SRP68	Q9UHB9	627 aa	Known RBP	15.61	■□□□□ 0.09
PSMC3-205	ENST00000528362	ZBTB1	Q9Y2K1	713 aa		15.61	■□□□□ 0.09
PSMC3-205	ENST00000528362	SOS1	Q07889	1333 aa	Predicted RBP	15.61	■□□□□ 0.09
PSMC3-205	ENST00000528362	BTBD11	A6QL63	1104 aa		15.6	■□□□□ 0.09
PSMC3-205	ENST00000528362	NEFM	P07197	916 aa		15.6	■□□□□ 0.09
PSMC3-205	ENST00000528362	NFE2L2	Q16236	605 aa		15.6	■□□□□ 0.09
PSMC3-205	ENST00000528362	CD2AP	Q9Y5K6	639 aa		15.6	■□□□□ 0.09
PSMC3-205	ENST00000528362	USP42	Q9H9J4	1324 aa	Known RBP	15.6	■□□□□ 0.09
PSMC3-205	ENST00000528362	NLGN1	Q8N2Q7	840 aa		15.59	■□□□□ 0.09
PSMC3-205	ENST00000528362	FMNL2	Q96PY5	1086 aa		15.59	■□□□□ 0.09
PSMC3-205	ENST00000528362	MAPK8IP3	Q9UPT6	1336 aa		15.59	■□□□□ 0.09
PSMC3-205	ENST00000528362	STARD3NL	O95772	234 aa		15.58	■□□□□ 0.08
PSMC3-205	ENST00000528362	PNN	Q9H307	717 aa	Known RBP	15.58	■□□□□ 0.08
PSMC3-205	ENST00000528362	MYH14	Q7Z406	1995 aa	Known RBP	15.58	■□□□□ 0.08
PSMC3-205	ENST00000528362	UBR2	Q8IWV8	1755 aa		15.57	■□□□□ 0.08
PSMC3-205	ENST00000528362	FKBP8	Q14318	412 aa		15.57	■□□□□ 0.08
PSMC3-205	ENST00000528362	COL15A1	P39059	1388 aa		15.57	■□□□□ 0.08

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms