RNA–Protein interactions for RNA: ENST00000528320.5

PUF60-212, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 922 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-212ENST00000528320 TAF1LQ8IZX4 1826 aa20.47■□□□□ 0.87
PUF60-212ENST00000528320 TOGARAM1Q9Y4F4 1720 aa20.46■□□□□ 0.87
PUF60-212ENST00000528320 ITGB4P16144 1822 aa20.45■□□□□ 0.86
PUF60-212ENST00000528320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.44■□□□□ 0.86
PUF60-212ENST00000528320 LOC102724428A0A0B4J2F2 783 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 CCER2I3L3R5 266 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 ANP32CO43423 234 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 SIK1P57059 783 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 AMIGO3Q86WK7 504 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 IFNL2Q8IZJ0 200 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 C4BP0C0L5 1744 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 CEP350Q5VT06 3117 aa20.44■□□□□ 0.86
PUF60-212ENST00000528320 COL3A1P02461 1466 aaPredicted RBP20.43■□□□□ 0.86
PUF60-212ENST00000528320 SSFA2P28290 1259 aa20.43■□□□□ 0.86
PUF60-212ENST00000528320 TMOD3Q9NYL9 352 aa20.42■□□□□ 0.86
PUF60-212ENST00000528320 PHF14O94880 888 aa20.41■□□□□ 0.86
PUF60-212ENST00000528320 AMOTQ4VCS5 1084 aa20.41■□□□□ 0.86
PUF60-212ENST00000528320 SULT6B1Q6IMI4 303 aa20.41■□□□□ 0.86
PUF60-212ENST00000528320 LINC00116Q8NCU8 138 aa20.41■□□□□ 0.86
PUF60-212ENST00000528320 PLEKHO1Q53GL0 409 aaPredicted RBP20.4■□□□□ 0.86
PUF60-212ENST00000528320 SMIM5Q71RC9 77 aa20.4■□□□□ 0.86
PUF60-212ENST00000528320 ASAP1Q9ULH1 1129 aa20.4■□□□□ 0.86
PUF60-212ENST00000528320 UBR3Q6ZT12 1888 aa20.39■□□□□ 0.85
PUF60-212ENST00000528320 ERVV-2B6SEH9 535 aa20.38■□□□□ 0.85
PUF60-212ENST00000528320 ATP6V1AP38606 617 aa20.38■□□□□ 0.85
PUF60-212ENST00000528320 ITPK1Q13572 414 aa20.38■□□□□ 0.85
PUF60-212ENST00000528320 KDM6AO15550 1401 aaPredicted RBP20.37■□□□□ 0.85
PUF60-212ENST00000528320 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
PUF60-212ENST00000528320 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
PUF60-212ENST00000528320 DCAF5Q96JK2 942 aa20.37■□□□□ 0.85
PUF60-212ENST00000528320 ATG3Q9NT62 314 aa20.37■□□□□ 0.85
PUF60-212ENST00000528320 GPBP1L1Q9HC44 474 aaPredicted RBP20.36■□□□□ 0.85
PUF60-212ENST00000528320 GNPATO15228 680 aa20.35■□□□□ 0.85
PUF60-212ENST00000528320 HSP90AB1P08238 724 aaKnown RBP20.35■□□□□ 0.85
PUF60-212ENST00000528320 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
PUF60-212ENST00000528320 ADCY9O60503 1353 aa20.34■□□□□ 0.85
PUF60-212ENST00000528320 PPP2R1AP30153 589 aa20.33■□□□□ 0.85
PUF60-212ENST00000528320 MMP10P09238 476 aa20.31■□□□□ 0.84
PUF60-212ENST00000528320 HMOX1P09601 288 aa20.31■□□□□ 0.84
PUF60-212ENST00000528320 TRAPPC3LQ5T215 181 aa20.31■□□□□ 0.84
PUF60-212ENST00000528320 RTCBQ9Y3I0 505 aaKnown RBP20.31■□□□□ 0.84
PUF60-212ENST00000528320 NLGN1Q8N2Q7 840 aa20.3■□□□□ 0.84
PUF60-212ENST00000528320 SLC4A9Q96Q91 983 aa20.3■□□□□ 0.84
PUF60-212ENST00000528320 WWC3Q9ULE0 1092 aa20.3■□□□□ 0.84
PUF60-212ENST00000528320 AKAP4Q5JQC9 854 aa20.29■□□□□ 0.84
PUF60-212ENST00000528320 RC3H1Q5TC82 1133 aaKnown RBP20.29■□□□□ 0.84
PUF60-212ENST00000528320 ADRA2BP18089 450 aa20.28■□□□□ 0.84
PUF60-212ENST00000528320 TGFB2P61812 414 aa20.28■□□□□ 0.84
PUF60-212ENST00000528320 MTHFSDQ2M296 383 aaKnown RBP20.28■□□□□ 0.84
PUF60-212ENST00000528320 RBM42Q9BTD8 480 aaKnown RBP20.28■□□□□ 0.84
PUF60-212ENST00000528320 ADAMTS7Q9UKP4 1686 aa20.27■□□□□ 0.84
PUF60-212ENST00000528320 CENPBP07199 599 aaPredicted RBP20.27■□□□□ 0.84
PUF60-212ENST00000528320 ZNF526Q8TF50 670 aaPredicted RBP20.27■□□□□ 0.84
PUF60-212ENST00000528320 CNGB1Q14028 1251 aaPredicted RBP20.26■□□□□ 0.83
PUF60-212ENST00000528320 C1orf141Q5JVX7 400 aa20.26■□□□□ 0.83
PUF60-212ENST00000528320 ARHGEF1Q92888 912 aaKnown RBP20.26■□□□□ 0.83
PUF60-212ENST00000528320 LGR6Q9HBX8 967 aa20.26■□□□□ 0.83
PUF60-212ENST00000528320 ZNF831Q5JPB2 1677 aa20.26■□□□□ 0.83
PUF60-212ENST00000528320 RPS6KA4O75676 772 aa20.25■□□□□ 0.83
PUF60-212ENST00000528320 CABP4P57796 275 aa20.25■□□□□ 0.83
PUF60-212ENST00000528320 NFATC2IPQ8NCF5 419 aa20.25■□□□□ 0.83
PUF60-212ENST00000528320 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
PUF60-212ENST00000528320 SCN11AQ9UI33 1791 aa20.24■□□□□ 0.83
PUF60-212ENST00000528320 HSPA6P17066 643 aa20.24■□□□□ 0.83
PUF60-212ENST00000528320 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
PUF60-212ENST00000528320 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
PUF60-212ENST00000528320 MRC1P22897 1456 aa20.24■□□□□ 0.83
PUF60-212ENST00000528320 RNMTO43148 476 aaKnown RBP20.23■□□□□ 0.83
PUF60-212ENST00000528320 GYS1P13807 737 aa20.23■□□□□ 0.83
PUF60-212ENST00000528320 RFC4P35249 363 aa20.23■□□□□ 0.83
PUF60-212ENST00000528320 PXDNLA1KZ92 1463 aa20.23■□□□□ 0.83
PUF60-212ENST00000528320 A0A0G2JLW4 131 aa20.22■□□□□ 0.83
PUF60-212ENST00000528320 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
PUF60-212ENST00000528320 CFAP53Q96M91 514 aa20.22■□□□□ 0.83
PUF60-212ENST00000528320 SLC52A2Q9HAB3 445 aa20.22■□□□□ 0.83
PUF60-212ENST00000528320 CCDC87Q9NVE4 849 aa20.22■□□□□ 0.83
PUF60-212ENST00000528320 KIF13BQ9NQT8 1826 aa20.21■□□□□ 0.83
PUF60-212ENST00000528320 U2SURPO15042 1029 aaKnown RBP20.21■□□□□ 0.83
PUF60-212ENST00000528320 BCS1LQ9Y276 419 aa20.21■□□□□ 0.83
PUF60-212ENST00000528320 KIF3CO14782 793 aa20.2■□□□□ 0.82
PUF60-212ENST00000528320 PARP3Q9Y6F1 533 aa20.2■□□□□ 0.82
PUF60-212ENST00000528320 CICQ96RK0 1608 aaPredicted RBP20.2■□□□□ 0.82
PUF60-212ENST00000528320 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
PUF60-212ENST00000528320 PTCD1O75127 700 aaKnown RBP20.19■□□□□ 0.82
PUF60-212ENST00000528320 FCHSD2O94868 740 aa20.19■□□□□ 0.82
PUF60-212ENST00000528320 RALBP1Q15311 655 aa20.19■□□□□ 0.82
PUF60-212ENST00000528320 IFFO2Q5TF58 517 aa20.19■□□□□ 0.82
PUF60-212ENST00000528320 IL17REQ8NFR9 667 aa20.19■□□□□ 0.82
PUF60-212ENST00000528320 DPEP1P16444 411 aa20.18■□□□□ 0.82
PUF60-212ENST00000528320 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
PUF60-212ENST00000528320 COL5A3P25940 1745 aaPredicted RBP20.17■□□□□ 0.82
PUF60-212ENST00000528320 ARHGAP27Q6ZUM4 889 aa20.17■□□□□ 0.82
PUF60-212ENST00000528320 GAS2L2Q8NHY3 880 aa20.17■□□□□ 0.82
PUF60-212ENST00000528320 CEMIPQ8WUJ3 1361 aa20.17■□□□□ 0.82
PUF60-212ENST00000528320 MYH14Q7Z406 1995 aaKnown RBP20.17■□□□□ 0.82
PUF60-212ENST00000528320 KIAA1551Q9HCM1 1747 aa20.16■□□□□ 0.82
PUF60-212ENST00000528320 PRKAR2BP31323 418 aa20.16■□□□□ 0.82
PUF60-212ENST00000528320 CRKLP46109 303 aaKnown RBP20.16■□□□□ 0.82
PUF60-212ENST00000528320 KCNA3P22001 575 aa20.15■□□□□ 0.82
PUF60-212ENST00000528320 C4AP0C0L4 1744 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms