RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
TRAPPC4-209ENST00000528230 PPP1R1BQ9UD71 204 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-209ENST00000528230 ATF5Q9Y2D1 282 aaPredicted RBP16.25■□□□□ 0.19
TRAPPC4-209ENST00000528230 SRCAPQ6ZRS2 3230 aa16.25■□□□□ 0.19
TRAPPC4-209ENST00000528230 FLAD1Q8NFF5 587 aa16.24■□□□□ 0.19
TRAPPC4-209ENST00000528230 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
TRAPPC4-209ENST00000528230 COL24A1Q17RW2 1714 aa16.24■□□□□ 0.19
TRAPPC4-209ENST00000528230 NFATC2IPQ8NCF5 419 aa16.23■□□□□ 0.19
TRAPPC4-209ENST00000528230 SGIP1Q9BQI5 828 aa16.23■□□□□ 0.19
TRAPPC4-209ENST00000528230 ADAMTS7Q9UKP4 1686 aa16.22■□□□□ 0.19
TRAPPC4-209ENST00000528230 RNMTO43148 476 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-209ENST00000528230 ATP6V1AP38606 617 aa16.22■□□□□ 0.19
TRAPPC4-209ENST00000528230 DDX10Q13206 875 aaKnown RBP16.22■□□□□ 0.19
TRAPPC4-209ENST00000528230 GAS2L2Q8NHY3 880 aa16.22■□□□□ 0.19
TRAPPC4-209ENST00000528230 UBR3Q6ZT12 1888 aa16.21■□□□□ 0.19
TRAPPC4-209ENST00000528230 FCHSD2O94868 740 aa16.21■□□□□ 0.19
TRAPPC4-209ENST00000528230 RALBP1Q15311 655 aa16.21■□□□□ 0.19
TRAPPC4-209ENST00000528230 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
TRAPPC4-209ENST00000528230 RSPH6AQ9H0K4 717 aa16.21■□□□□ 0.19
TRAPPC4-209ENST00000528230 SLC52A2Q9HAB3 445 aa16.21■□□□□ 0.19
TRAPPC4-209ENST00000528230 LGR6Q9HBX8 967 aa16.21■□□□□ 0.19
TRAPPC4-209ENST00000528230 U2AF1L5P0DN76 240 aaPredicted RBP16.2■□□□□ 0.18
TRAPPC4-209ENST00000528230 U2AF1Q01081 240 aaKnown RBP eCLIP16.2■□□□□ 0.18
TRAPPC4-209ENST00000528230 ITPK1Q13572 414 aa16.2■□□□□ 0.18
TRAPPC4-209ENST00000528230 LINC00116Q8NCU8 138 aa16.2■□□□□ 0.18
TRAPPC4-209ENST00000528230 AK7Q96M32 723 aa16.2■□□□□ 0.18
TRAPPC4-209ENST00000528230 MRC1P22897 1456 aa16.19■□□□□ 0.18
TRAPPC4-209ENST00000528230 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
TRAPPC4-209ENST00000528230 RBM42Q9BTD8 480 aaKnown RBP16.19■□□□□ 0.18
TRAPPC4-209ENST00000528230 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
TRAPPC4-209ENST00000528230 RC3H1Q5TC82 1133 aaKnown RBP16.18■□□□□ 0.18
TRAPPC4-209ENST00000528230 SLC4A9Q96Q91 983 aa16.18■□□□□ 0.18
TRAPPC4-209ENST00000528230 ARXQ96QS3 562 aa16.18■□□□□ 0.18
TRAPPC4-209ENST00000528230 COL5A3P25940 1745 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC4-209ENST00000528230 MAP3K5Q99683 1374 aa16.17■□□□□ 0.18
TRAPPC4-209ENST00000528230 SSFA2P28290 1259 aa16.17■□□□□ 0.18
TRAPPC4-209ENST00000528230 POLD1P28340 1107 aa16.17■□□□□ 0.18
TRAPPC4-209ENST00000528230 PHACTR3Q96KR7 559 aa16.17■□□□□ 0.18
TRAPPC4-209ENST00000528230 CICQ96RK0 1608 aaPredicted RBP16.16■□□□□ 0.18
TRAPPC4-209ENST00000528230 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-209ENST00000528230 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-209ENST00000528230 IL17REQ8NFR9 667 aa16.15■□□□□ 0.18
TRAPPC4-209ENST00000528230 CNTNAP4Q9C0A0 1308 aa16.15■□□□□ 0.18
TRAPPC4-209ENST00000528230 GNPATO15228 680 aa16.14■□□□□ 0.17
TRAPPC4-209ENST00000528230 SYT17Q9BSW7 474 aa16.14■□□□□ 0.17
TRAPPC4-209ENST00000528230 FHDC1Q9C0D6 1143 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC4-209ENST00000528230 SIPA1L3O60292 1781 aaPredicted RBP16.13■□□□□ 0.17
TRAPPC4-209ENST00000528230 MYH14Q7Z406 1995 aaKnown RBP16.13■□□□□ 0.17
TRAPPC4-209ENST00000528230 TEFQ10587 303 aa16.13■□□□□ 0.17
TRAPPC4-209ENST00000528230 AMIGO3Q86WK7 504 aa16.13■□□□□ 0.17
TRAPPC4-209ENST00000528230 PNNQ9H307 717 aaKnown RBP16.13■□□□□ 0.17
TRAPPC4-209ENST00000528230 RTCBQ9Y3I0 505 aaKnown RBP16.13■□□□□ 0.17
TRAPPC4-209ENST00000528230 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
TRAPPC4-209ENST00000528230 TJP1Q07157 1748 aa16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 HTATSF1O43719 755 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 PHF14O94880 888 aa16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 NEFMP07197 916 aa16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 VSIG10Q8N0Z9 540 aa16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 MYBBP1AQ9BQG0 1328 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-209ENST00000528230 UBR2Q8IWV8 1755 aa16.11■□□□□ 0.17
TRAPPC4-209ENST00000528230 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
TRAPPC4-209ENST00000528230 TRAPPC3LQ5T215 181 aa16.11■□□□□ 0.17
TRAPPC4-209ENST00000528230 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-209ENST00000528230 KCPQ6ZWJ8 1503 aa16.09■□□□□ 0.17
TRAPPC4-209ENST00000528230 CRKLP46109 303 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-209ENST00000528230 SMIM5Q71RC9 77 aa16.09■□□□□ 0.17
TRAPPC4-209ENST00000528230 TTC5Q8N0Z6 440 aa16.09■□□□□ 0.17
TRAPPC4-209ENST00000528230 PLEKHF1Q96S99 279 aa16.09■□□□□ 0.17
TRAPPC4-209ENST00000528230 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
TRAPPC4-209ENST00000528230 MSL1Q68DK7 614 aa16.08■□□□□ 0.16
TRAPPC4-209ENST00000528230 ZNF790Q6PG37 636 aa16.08■□□□□ 0.16
TRAPPC4-209ENST00000528230 DNAJC10Q8IXB1 793 aa16.08■□□□□ 0.16
TRAPPC4-209ENST00000528230 ARHGEF1Q92888 912 aaKnown RBP16.08■□□□□ 0.16
TRAPPC4-209ENST00000528230 INTS5Q6P9B9 1019 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-209ENST00000528230 PRKRIP1Q9H875 184 aaPredicted RBP16.07■□□□□ 0.16
TRAPPC4-209ENST00000528230 CYP19A1P11511 503 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-209ENST00000528230 RFC4P35249 363 aa16.06■□□□□ 0.16
TRAPPC4-209ENST00000528230 NLGN1Q8N2Q7 840 aa16.06■□□□□ 0.16
TRAPPC4-209ENST00000528230 TEX13AQ9BXU3 409 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-209ENST00000528230 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
TRAPPC4-209ENST00000528230 MCM10Q7L590 875 aa16.05■□□□□ 0.16
TRAPPC4-209ENST00000528230 ZNF496Q96IT1 587 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-209ENST00000528230 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
TRAPPC4-209ENST00000528230 CD2APQ9Y5K6 639 aa16.05■□□□□ 0.16
TRAPPC4-209ENST00000528230 C4AP0C0L4 1744 aa16.05■□□□□ 0.16
TRAPPC4-209ENST00000528230 HEG1Q9ULI3 1381 aa16.04■□□□□ 0.16
TRAPPC4-209ENST00000528230 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
TRAPPC4-209ENST00000528230 STARD3NLO95772 234 aa16.04■□□□□ 0.16
TRAPPC4-209ENST00000528230 NFE2L2Q16236 605 aa16.04■□□□□ 0.16
TRAPPC4-209ENST00000528230 FMNL2Q96PY5 1086 aa16.04■□□□□ 0.16
TRAPPC4-209ENST00000528230 ZNF316A6NFI3 1004 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-209ENST00000528230 TAF7Q15545 349 aaPredicted RBP16.03■□□□□ 0.16
TRAPPC4-209ENST00000528230 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
TRAPPC4-209ENST00000528230 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
TRAPPC4-209ENST00000528230 GYS1P13807 737 aa16.02■□□□□ 0.16
TRAPPC4-209ENST00000528230 DCTN1Q14203 1278 aa16.02■□□□□ 0.16
TRAPPC4-209ENST00000528230 USP42Q9H9J4 1324 aaKnown RBP16■□□□□ 0.15
TRAPPC4-209ENST00000528230 KCNQ3O43525 872 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms