RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 PRIM1P49642 420 aaKnown RBP15.59■□□□□ 0.09
CCDC90B-210ENST00000528149 DDX54Q8TDD1 881 aaKnown RBP15.59■□□□□ 0.09
CCDC90B-210ENST00000528149 C5P01031 1676 aa15.59■□□□□ 0.09
CCDC90B-210ENST00000528149 KIF24Q5T7B8 1368 aa15.59■□□□□ 0.09
CCDC90B-210ENST00000528149 PPP2R1AP30153 589 aa15.58■□□□□ 0.08
CCDC90B-210ENST00000528149 MTHFSP49914 203 aa15.58■□□□□ 0.08
CCDC90B-210ENST00000528149 PRKRIP1Q9H875 184 aaPredicted RBP15.58■□□□□ 0.08
CCDC90B-210ENST00000528149 NMRK2Q9NPI5 230 aa15.58■□□□□ 0.08
CCDC90B-210ENST00000528149 RALBP1Q15311 655 aa15.57■□□□□ 0.08
CCDC90B-210ENST00000528149 PIAS4Q8N2W9 510 aaPredicted RBP15.56■□□□□ 0.08
CCDC90B-210ENST00000528149 MYBBP1AQ9BQG0 1328 aaKnown RBP15.56■□□□□ 0.08
CCDC90B-210ENST00000528149 ANP32CO43423 234 aa15.55■□□□□ 0.08
CCDC90B-210ENST00000528149 IL13P35225 146 aa15.54■□□□□ 0.08
CCDC90B-210ENST00000528149 DIEXFQ68CQ4 756 aaKnown RBP15.54■□□□□ 0.08
CCDC90B-210ENST00000528149 RBM46Q8TBY0 533 aaKnown RBP15.54■□□□□ 0.08
CCDC90B-210ENST00000528149 TAF1LQ8IZX4 1826 aa15.54■□□□□ 0.08
CCDC90B-210ENST00000528149 CYP27B1O15528 508 aa15.53■□□□□ 0.08
CCDC90B-210ENST00000528149 ZCRB1Q8TBF4 217 aaKnown RBP15.53■□□□□ 0.08
CCDC90B-210ENST00000528149 TATP17735 454 aaPredicted RBP15.52■□□□□ 0.08
CCDC90B-210ENST00000528149 HMOX1P09601 288 aa15.51■□□□□ 0.07
CCDC90B-210ENST00000528149 AMIGO3Q86WK7 504 aa15.51■□□□□ 0.07
CCDC90B-210ENST00000528149 RAPGEF4Q8WZA2 1011 aa15.51■□□□□ 0.07
CCDC90B-210ENST00000528149 FLAD1Q8NFF5 587 aa15.5■□□□□ 0.07
CCDC90B-210ENST00000528149 C4BP0C0L5 1744 aa15.5■□□□□ 0.07
CCDC90B-210ENST00000528149 KIAA1551Q9HCM1 1747 aa15.5■□□□□ 0.07
CCDC90B-210ENST00000528149 UBR3Q6ZT12 1888 aa15.49■□□□□ 0.07
CCDC90B-210ENST00000528149 PXDNLA1KZ92 1463 aa15.49■□□□□ 0.07
CCDC90B-210ENST00000528149 HSPA1AP0DMV8 641 aaKnown RBP15.49■□□□□ 0.07
CCDC90B-210ENST00000528149 HSPA1BP0DMV9 641 aaKnown RBP15.49■□□□□ 0.07
CCDC90B-210ENST00000528149 SULT6B1Q6IMI4 303 aa15.49■□□□□ 0.07
CCDC90B-210ENST00000528149 CFAP53Q96M91 514 aa15.49■□□□□ 0.07
CCDC90B-210ENST00000528149 ITGB4P16144 1822 aa15.49■□□□□ 0.07
CCDC90B-210ENST00000528149 FSTL1Q12841 308 aa15.48■□□□□ 0.07
CCDC90B-210ENST00000528149 SMIM5Q71RC9 77 aa15.48■□□□□ 0.07
CCDC90B-210ENST00000528149 C16orf71Q8IYS4 520 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-210ENST00000528149 VIRMAQ69YN4 1812 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-210ENST00000528149 N4BP2Q86UW6 1770 aaPredicted RBP15.47■□□□□ 0.07
CCDC90B-210ENST00000528149 KDM6AO15550 1401 aaPredicted RBP15.47■□□□□ 0.07
CCDC90B-210ENST00000528149 DIAPH1O60610 1272 aaKnown RBP15.47■□□□□ 0.07
CCDC90B-210ENST00000528149 KIF13BQ9NQT8 1826 aa15.47■□□□□ 0.07
CCDC90B-210ENST00000528149 PHF14O94880 888 aa15.46■□□□□ 0.07
CCDC90B-210ENST00000528149 CCDC184Q52MB2 194 aa15.46■□□□□ 0.07
CCDC90B-210ENST00000528149 KCPQ6ZWJ8 1503 aa15.46■□□□□ 0.07
CCDC90B-210ENST00000528149 KDRP35968 1356 aa15.46■□□□□ 0.07
CCDC90B-210ENST00000528149 PCDH11XQ9BZA7 1347 aa15.45■□□□□ 0.06
CCDC90B-210ENST00000528149 PCDH11YQ9BZA8 1340 aa15.45■□□□□ 0.06
CCDC90B-210ENST00000528149 AK7Q96M32 723 aa15.45■□□□□ 0.06
CCDC90B-210ENST00000528149 BCS1LQ9Y276 419 aa15.45■□□□□ 0.06
CCDC90B-210ENST00000528149 PALLDQ8WX93 1383 aa15.45■□□□□ 0.06
CCDC90B-210ENST00000528149 PHKG2P15735 406 aa15.44■□□□□ 0.06
CCDC90B-210ENST00000528149 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.43■□□□□ 0.06
CCDC90B-210ENST00000528149 U2SURPO15042 1029 aaKnown RBP15.43■□□□□ 0.06
CCDC90B-210ENST00000528149 ARHGAP27Q6ZUM4 889 aa15.43■□□□□ 0.06
CCDC90B-210ENST00000528149 PLEKHG2Q9H7P9 1386 aa15.43■□□□□ 0.06
CCDC90B-210ENST00000528149 DLG5Q8TDM6 1919 aa15.43■□□□□ 0.06
CCDC90B-210ENST00000528149 C10orf71Q711Q0 1435 aa15.43■□□□□ 0.06
CCDC90B-210ENST00000528149 C9orf131Q5VYM1 1079 aa15.42■□□□□ 0.06
CCDC90B-210ENST00000528149 BRCA1P38398 1863 aaKnown RBP15.42■□□□□ 0.06
CCDC90B-210ENST00000528149 TNRC6CQ9HCJ0 1690 aaKnown RBP15.41■□□□□ 0.06
CCDC90B-210ENST00000528149 ZNF530Q6P9A1 599 aaPredicted RBP15.41■□□□□ 0.06
CCDC90B-210ENST00000528149 MIER1Q8N108 512 aa15.41■□□□□ 0.06
CCDC90B-210ENST00000528149 MRS2Q9HD23 443 aa15.41■□□□□ 0.06
CCDC90B-210ENST00000528149 A0A0G2JLW4 131 aa15.4■□□□□ 0.06
CCDC90B-210ENST00000528149 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
CCDC90B-210ENST00000528149 SPG7Q9UQ90 795 aa15.4■□□□□ 0.06
CCDC90B-210ENST00000528149 MMP10P09238 476 aa15.39■□□□□ 0.05
CCDC90B-210ENST00000528149 U2AF1L5P0DN76 240 aaPredicted RBP15.39■□□□□ 0.05
CCDC90B-210ENST00000528149 U2AF1Q01081 240 aaKnown RBP eCLIP15.39■□□□□ 0.05
CCDC90B-210ENST00000528149 PIGBQ92521 554 aa15.39■□□□□ 0.05
CCDC90B-210ENST00000528149 PHACTR3Q96KR7 559 aa15.39■□□□□ 0.05
CCDC90B-210ENST00000528149 NUDCQ9Y266 331 aa15.39■□□□□ 0.05
CCDC90B-210ENST00000528149 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
CCDC90B-210ENST00000528149 SSFA2P28290 1259 aa15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 SMC1BQ8NDV3 1235 aa15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 RSPH6AQ9H0K4 717 aa15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 RRAGCQ9HB90 399 aa15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 KDM2BQ8NHM5 1336 aa15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 ARFGEF1Q9Y6D6 1849 aa15.38■□□□□ 0.05
CCDC90B-210ENST00000528149 FCHSD2O94868 740 aa15.37■□□□□ 0.05
CCDC90B-210ENST00000528149 HMGB2P26583 209 aaKnown RBP15.37■□□□□ 0.05
CCDC90B-210ENST00000528149 TGFB2P61812 414 aa15.37■□□□□ 0.05
CCDC90B-210ENST00000528149 LGR6Q9HBX8 967 aa15.37■□□□□ 0.05
CCDC90B-210ENST00000528149 ADAMTS7Q9UKP4 1686 aa15.37■□□□□ 0.05
CCDC90B-210ENST00000528149 DPEP1P16444 411 aa15.36■□□□□ 0.05
CCDC90B-210ENST00000528149 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
CCDC90B-210ENST00000528149 WDR43Q15061 677 aaKnown RBP eCLIP15.36■□□□□ 0.05
CCDC90B-210ENST00000528149 PLEKHO1Q53GL0 409 aaPredicted RBP15.36■□□□□ 0.05
CCDC90B-210ENST00000528149 IFNL2Q8IZJ0 200 aa15.36■□□□□ 0.05
CCDC90B-210ENST00000528149 ASAP1Q9ULH1 1129 aa15.36■□□□□ 0.05
CCDC90B-210ENST00000528149 LINC00116Q8NCU8 138 aa15.35■□□□□ 0.05
CCDC90B-210ENST00000528149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC90B-210ENST00000528149 PCDH10Q9P2E7 1040 aa15.35■□□□□ 0.05
CCDC90B-210ENST00000528149 RNF181Q9P0P0 153 aa15.34■□□□□ 0.05
CCDC90B-210ENST00000528149 CCER2I3L3R5 266 aa15.33■□□□□ 0.04
CCDC90B-210ENST00000528149 GNPATO15228 680 aa15.33■□□□□ 0.04
CCDC90B-210ENST00000528149 SLC4A9Q96Q91 983 aa15.33■□□□□ 0.04
CCDC90B-210ENST00000528149 ATG3Q9NT62 314 aa15.33■□□□□ 0.04
CCDC90B-210ENST00000528149 MRC1P22897 1456 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms