RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 PKD1L3Q7Z443 1732 aa17.15■□□□□ 0.34
SRPRA-202ENST00000527817 WASHC2AQ641Q2 1341 aa17.15■□□□□ 0.34
SRPRA-202ENST00000527817 CICQ96RK0 1608 aaPredicted RBP17.14■□□□□ 0.33
SRPRA-202ENST00000527817 A0A0G2JLW4 131 aa17.14■□□□□ 0.33
SRPRA-202ENST00000527817 PHKG2P15735 406 aa17.14■□□□□ 0.33
SRPRA-202ENST00000527817 RC3H1Q5TC82 1133 aaKnown RBP17.14■□□□□ 0.33
SRPRA-202ENST00000527817 ARHGAP27Q6ZUM4 889 aa17.14■□□□□ 0.33
SRPRA-202ENST00000527817 CARD14Q9BXL6 1004 aa17.14■□□□□ 0.33
SRPRA-202ENST00000527817 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
SRPRA-202ENST00000527817 RTCBQ9Y3I0 505 aaKnown RBP17.14■□□□□ 0.33
SRPRA-202ENST00000527817 PXDNLA1KZ92 1463 aa17.13■□□□□ 0.33
SRPRA-202ENST00000527817 PPM1GO15355 546 aaPredicted RBP17.12■□□□□ 0.33
SRPRA-202ENST00000527817 KIF13BQ9NQT8 1826 aa17.12■□□□□ 0.33
SRPRA-202ENST00000527817 ADRA2BP18089 450 aa17.11■□□□□ 0.33
SRPRA-202ENST00000527817 ARHGEF1Q92888 912 aaKnown RBP17.11■□□□□ 0.33
SRPRA-202ENST00000527817 CCDC87Q9NVE4 849 aa17.11■□□□□ 0.33
SRPRA-202ENST00000527817 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
SRPRA-202ENST00000527817 FCHSD2O94868 740 aa17.1■□□□□ 0.33
SRPRA-202ENST00000527817 DPEP1P16444 411 aa17.1■□□□□ 0.33
SRPRA-202ENST00000527817 RBM46Q8TBY0 533 aaKnown RBP17.1■□□□□ 0.33
SRPRA-202ENST00000527817 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
SRPRA-202ENST00000527817 NMRK2Q9NPI5 230 aa17.1■□□□□ 0.33
SRPRA-202ENST00000527817 KIF20BQ96Q89 1820 aa17.1■□□□□ 0.33
SRPRA-202ENST00000527817 RPS6KA4O75676 772 aa17.09■□□□□ 0.33
SRPRA-202ENST00000527817 GYS1P13807 737 aa17.09■□□□□ 0.33
SRPRA-202ENST00000527817 KCNA3P22001 575 aa17.09■□□□□ 0.33
SRPRA-202ENST00000527817 N4BP2Q86UW6 1770 aaPredicted RBP17.08■□□□□ 0.33
SRPRA-202ENST00000527817 C10orf71Q711Q0 1435 aa17.08■□□□□ 0.32
SRPRA-202ENST00000527817 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
SRPRA-202ENST00000527817 RFC4P35249 363 aa17.08■□□□□ 0.32
SRPRA-202ENST00000527817 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
SRPRA-202ENST00000527817 PARP3Q9Y6F1 533 aa17.08■□□□□ 0.32
SRPRA-202ENST00000527817 KIAA1551Q9HCM1 1747 aa17.07■□□□□ 0.32
SRPRA-202ENST00000527817 KDRP35968 1356 aa17.07■□□□□ 0.32
SRPRA-202ENST00000527817 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
SRPRA-202ENST00000527817 CNTNAP4Q9C0A0 1308 aa17.06■□□□□ 0.32
SRPRA-202ENST00000527817 FSTL1Q12841 308 aa17.06■□□□□ 0.32
SRPRA-202ENST00000527817 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
SRPRA-202ENST00000527817 PIM2Q9P1W9 311 aa17.06■□□□□ 0.32
SRPRA-202ENST00000527817 HSP90AB1P08238 724 aaKnown RBP17.05■□□□□ 0.32
SRPRA-202ENST00000527817 C16orf71Q8IYS4 520 aaPredicted RBP17.05■□□□□ 0.32
SRPRA-202ENST00000527817 JMYQ8N9B5 988 aa17.05■□□□□ 0.32
SRPRA-202ENST00000527817 KLRG1Q96E93 195 aa17.05■□□□□ 0.32
SRPRA-202ENST00000527817 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
SRPRA-202ENST00000527817 EIF4A2Q14240 407 aaKnown RBP17.04■□□□□ 0.32
SRPRA-202ENST00000527817 ZNF831Q5JPB2 1677 aa17.04■□□□□ 0.32
SRPRA-202ENST00000527817 DALRD3Q5D0E6 543 aaKnown RBP17.03■□□□□ 0.32
SRPRA-202ENST00000527817 KDM2BQ8NHM5 1336 aa17.02■□□□□ 0.32
SRPRA-202ENST00000527817 ANKRD26Q9UPS8 1709 aa17.02■□□□□ 0.32
SRPRA-202ENST00000527817 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
SRPRA-202ENST00000527817 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
SRPRA-202ENST00000527817 PCNTO95613 3336 aa17.01■□□□□ 0.31
SRPRA-202ENST00000527817 CABP4P57796 275 aa17.01■□□□□ 0.31
SRPRA-202ENST00000527817 BRCA1P38398 1863 aaKnown RBP17.01■□□□□ 0.31
SRPRA-202ENST00000527817 HTRA3P83110 453 aa17■□□□□ 0.31
SRPRA-202ENST00000527817 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
SRPRA-202ENST00000527817 COL13A1Q5TAT6 717 aaPredicted RBP17■□□□□ 0.31
SRPRA-202ENST00000527817 RRAGCQ9HB90 399 aa17■□□□□ 0.31
SRPRA-202ENST00000527817 MYH14Q7Z406 1995 aaKnown RBP17■□□□□ 0.31
SRPRA-202ENST00000527817 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
SRPRA-202ENST00000527817 WDR90Q96KV7 1748 aa16.99■□□□□ 0.31
SRPRA-202ENST00000527817 RNF181Q9P0P0 153 aa16.99■□□□□ 0.31
SRPRA-202ENST00000527817 CRKLP46109 303 aaKnown RBP16.98■□□□□ 0.31
SRPRA-202ENST00000527817 FKBP8Q14318 412 aa16.98■□□□□ 0.31
SRPRA-202ENST00000527817 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
SRPRA-202ENST00000527817 PTCD1O75127 700 aaKnown RBP16.97■□□□□ 0.31
SRPRA-202ENST00000527817 TM4SF1P30408 202 aa16.97■□□□□ 0.31
SRPRA-202ENST00000527817 MTHFSP49914 203 aa16.97■□□□□ 0.31
SRPRA-202ENST00000527817 DDR1Q08345 913 aa16.97■□□□□ 0.31
SRPRA-202ENST00000527817 ZNF530Q6P9A1 599 aaPredicted RBP16.97■□□□□ 0.31
SRPRA-202ENST00000527817 SRP68Q9UHB9 627 aaKnown RBP16.97■□□□□ 0.31
SRPRA-202ENST00000527817 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.31
SRPRA-202ENST00000527817 TNNT2P45379 298 aaPredicted RBP16.96■□□□□ 0.31
SRPRA-202ENST00000527817 NFATC2IPQ8NCF5 419 aa16.96■□□□□ 0.31
SRPRA-202ENST00000527817 SMC1BQ8NDV3 1235 aa16.96■□□□□ 0.31
SRPRA-202ENST00000527817 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.3
SRPRA-202ENST00000527817 CHRNA5P30532 468 aa16.95■□□□□ 0.3
SRPRA-202ENST00000527817 KDM6AO15550 1401 aaPredicted RBP16.95■□□□□ 0.3
SRPRA-202ENST00000527817 POLRMTO00411 1230 aaKnown RBP16.94■□□□□ 0.3
SRPRA-202ENST00000527817 INTS5Q6P9B9 1019 aaKnown RBP16.94■□□□□ 0.3
SRPRA-202ENST00000527817 SBF1O95248 1867 aa16.94■□□□□ 0.3
SRPRA-202ENST00000527817 ZC3H4Q9UPT8 1303 aaKnown RBP16.94■□□□□ 0.3
SRPRA-202ENST00000527817 C1orf141Q5JVX7 400 aa16.93■□□□□ 0.3
SRPRA-202ENST00000527817 ZPR1O75312 459 aa16.92■□□□□ 0.3
SRPRA-202ENST00000527817 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
SRPRA-202ENST00000527817 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
SRPRA-202ENST00000527817 PRELPP51888 382 aa16.91■□□□□ 0.3
SRPRA-202ENST00000527817 GLTPD2A6NH11 291 aa16.9■□□□□ 0.3
SRPRA-202ENST00000527817 LMNB1P20700 586 aa16.9■□□□□ 0.3
SRPRA-202ENST00000527817 USPL1Q5W0Q7 1092 aa16.89■□□□□ 0.29
SRPRA-202ENST00000527817 TNRC6CQ9HCJ0 1690 aaKnown RBP16.88■□□□□ 0.29
SRPRA-202ENST00000527817 RASSF7Q02833 373 aa16.88■□□□□ 0.29
SRPRA-202ENST00000527817 AEBP1Q8IUX7 1158 aa16.88■□□□□ 0.29
SRPRA-202ENST00000527817 NARFQ9UHQ1 456 aa16.88■□□□□ 0.29
SRPRA-202ENST00000527817 TIMELESSQ9UNS1 1208 aa16.88■□□□□ 0.29
SRPRA-202ENST00000527817 CAPN15O75808 1086 aa16.87■□□□□ 0.29
SRPRA-202ENST00000527817 DNAJC10Q8IXB1 793 aa16.87■□□□□ 0.29
SRPRA-202ENST00000527817 TTLL6Q8N841 843 aa16.87■□□□□ 0.29
SRPRA-202ENST00000527817 SOS1Q07889 1333 aaPredicted RBP16.87■□□□□ 0.29
SRPRA-202ENST00000527817 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms