RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 NR1I2O75469 434 aa8.45□□□□□ -1.06
LINC01001-202ENST00000527683 RGS20O76081 388 aa8.45□□□□□ -1.06
LINC01001-202ENST00000527683 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
LINC01001-202ENST00000527683 BRICD5Q6PL45 260 aa8.45□□□□□ -1.06
LINC01001-202ENST00000527683 GIGYF2Q6Y7W6 1299 aaKnown RBP8.45□□□□□ -1.06
LINC01001-202ENST00000527683 AK7Q96M32 723 aa8.45□□□□□ -1.06
LINC01001-202ENST00000527683 TRPC5Q9UL62 973 aaPredicted RBP8.45□□□□□ -1.06
LINC01001-202ENST00000527683 DHX57Q6P158 1386 aaKnown RBP8.45□□□□□ -1.06
LINC01001-202ENST00000527683 CHD2O14647 1828 aaKnown RBP8.45□□□□□ -1.06
LINC01001-202ENST00000527683 HFM1A2PYH4 1435 aa8.45□□□□□ -1.06
LINC01001-202ENST00000527683 KDM4AO75164 1064 aa8.44□□□□□ -1.06
LINC01001-202ENST00000527683 ADH1BP00325 375 aa8.44□□□□□ -1.06
LINC01001-202ENST00000527683 RAB3GAP2Q9H2M9 1393 aa8.44□□□□□ -1.06
LINC01001-202ENST00000527683 SPSB2Q99619 263 aa8.43□□□□□ -1.06
LINC01001-202ENST00000527683 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
LINC01001-202ENST00000527683 ROBO2Q9HCK4 1378 aa8.43□□□□□ -1.06
LINC01001-202ENST00000527683 C1orf167Q5SNV9 1468 aa8.43□□□□□ -1.06
LINC01001-202ENST00000527683 ASXL1Q8IXJ9 1541 aa8.43□□□□□ -1.06
LINC01001-202ENST00000527683 DIP2AQ14689 1571 aa8.43□□□□□ -1.06
LINC01001-202ENST00000527683 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.43□□□□□ -1.06
LINC01001-202ENST00000527683 HOXA2O43364 376 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 FOXO3O43524 673 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 PDE4DQ08499 809 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 TTLL12Q14166 644 aaPredicted RBP8.42□□□□□ -1.06
LINC01001-202ENST00000527683 PRKD2Q9BZL6 878 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 PCDHGC3Q9UN70 934 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 RPGRIP1LQ68CZ1 1315 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 RGS12O14924 1447 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 ADGRL3Q9HAR2 1447 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 TRPM2O94759 1503 aa8.42□□□□□ -1.06
LINC01001-202ENST00000527683 ACIN1Q9UKV3 1341 aaKnown RBP8.41□□□□□ -1.06
LINC01001-202ENST00000527683 ESCO1Q5FWF5 840 aa8.41□□□□□ -1.06
LINC01001-202ENST00000527683 CCDC125Q86Z20 511 aa8.41□□□□□ -1.06
LINC01001-202ENST00000527683 SPIRE2Q8WWL2 714 aa8.41□□□□□ -1.06
LINC01001-202ENST00000527683 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
LINC01001-202ENST00000527683 XPCQ01831 940 aaPredicted RBP8.4□□□□□ -1.06
LINC01001-202ENST00000527683 LIAT1Q6ZQX7 453 aa8.4□□□□□ -1.06
LINC01001-202ENST00000527683 GJD4Q96KN9 370 aaPredicted RBP8.4□□□□□ -1.06
LINC01001-202ENST00000527683 SLC6A16Q9GZN6 736 aa8.4□□□□□ -1.06
LINC01001-202ENST00000527683 SETD1AO15047 1707 aaKnown RBP8.4□□□□□ -1.07
LINC01001-202ENST00000527683 NAIPQ13075 1403 aa8.39□□□□□ -1.07
LINC01001-202ENST00000527683 ATAD2Q6PL18 1390 aa8.39□□□□□ -1.07
LINC01001-202ENST00000527683 NDUFV2P19404 249 aa8.39□□□□□ -1.07
LINC01001-202ENST00000527683 WAPLQ7Z5K2 1190 aa8.39□□□□□ -1.07
LINC01001-202ENST00000527683 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
LINC01001-202ENST00000527683 SETBP1Q9Y6X0 1596 aa8.39□□□□□ -1.07
LINC01001-202ENST00000527683 NPHP3Q7Z494 1330 aa8.38□□□□□ -1.07
LINC01001-202ENST00000527683 E9PCH4 1651 aa8.38□□□□□ -1.07
LINC01001-202ENST00000527683 MOXD2PA6NHM9 499 aa8.38□□□□□ -1.07
LINC01001-202ENST00000527683 BEGAINQ9BUH8 593 aa8.38□□□□□ -1.07
LINC01001-202ENST00000527683 UNC13BO14795 1591 aa8.38□□□□□ -1.07
LINC01001-202ENST00000527683 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
LINC01001-202ENST00000527683 SHPRHQ149N8 1683 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 ADGRF5Q8IZF2 1346 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 FMNL1O95466 1100 aaPredicted RBP8.37□□□□□ -1.07
LINC01001-202ENST00000527683 TMEM132EQ6IEE7 984 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 TRIM67Q6ZTA4 783 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 UNC5CLQ8IV45 518 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 ANKLE1Q8NAG6 615 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 STK26Q9P289 416 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 ATRNO75882 1429 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
LINC01001-202ENST00000527683 NRXN3Q9Y4C0 1643 aa8.36□□□□□ -1.07
LINC01001-202ENST00000527683 LCE2BO14633 110 aa8.36□□□□□ -1.07
LINC01001-202ENST00000527683 RGL3Q3MIN7 710 aa8.36□□□□□ -1.07
LINC01001-202ENST00000527683 IQGAP3Q86VI3 1631 aa8.36□□□□□ -1.07
LINC01001-202ENST00000527683 MYO5BQ9ULV0 1848 aa8.36□□□□□ -1.07
LINC01001-202ENST00000527683 USP46P62068 366 aa8.35□□□□□ -1.07
LINC01001-202ENST00000527683 KRT28Q7Z3Y7 464 aa8.35□□□□□ -1.07
LINC01001-202ENST00000527683 SIRT1Q96EB6 747 aa8.35□□□□□ -1.07
LINC01001-202ENST00000527683 V9GY48 417 aaPredicted RBP8.35□□□□□ -1.07
LINC01001-202ENST00000527683 XRN1Q8IZH2 1706 aaKnown RBP8.34□□□□□ -1.07
LINC01001-202ENST00000527683 SPATA31A3Q5VYP0 1347 aa8.34□□□□□ -1.07
LINC01001-202ENST00000527683 DEFB132Q7Z7B7 95 aa8.34□□□□□ -1.07
LINC01001-202ENST00000527683 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.07
LINC01001-202ENST00000527683 TBC1D2Q9BYX2 928 aa8.34□□□□□ -1.07
LINC01001-202ENST00000527683 GPBP1L1Q9HC44 474 aaPredicted RBP8.34□□□□□ -1.07
LINC01001-202ENST00000527683 PRAG1Q86YV5 1406 aa8.34□□□□□ -1.07
LINC01001-202ENST00000527683 LRPPRCP42704 1394 aaKnown RBP8.34□□□□□ -1.07
LINC01001-202ENST00000527683 ABCC11Q96J66 1382 aa8.34□□□□□ -1.07
LINC01001-202ENST00000527683 NEXMIFQ5QGS0 1516 aa8.34□□□□□ -1.08
LINC01001-202ENST00000527683 MYOM2P54296 1465 aa8.33□□□□□ -1.08
LINC01001-202ENST00000527683 GGCXP38435 758 aa8.33□□□□□ -1.08
LINC01001-202ENST00000527683 MSS51Q4VC12 460 aa8.33□□□□□ -1.08
LINC01001-202ENST00000527683 NUTM1Q86Y26 1132 aa8.33□□□□□ -1.08
LINC01001-202ENST00000527683 CABLES1Q8TDN4 633 aa8.33□□□□□ -1.08
LINC01001-202ENST00000527683 FCF1Q9Y324 198 aaKnown RBP8.33□□□□□ -1.08
LINC01001-202ENST00000527683 PCDHB15Q9Y5E8 787 aa8.33□□□□□ -1.08
LINC01001-202ENST00000527683 PLEKHH1Q9ULM0 1364 aa8.33□□□□□ -1.08
LINC01001-202ENST00000527683 FAM83GA6ND36 823 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 FDX1P10109 184 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 SLC19A1P41440 591 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 MMP16P51512 607 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 VPS72Q15906 364 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 GRIPAP1Q4V328 841 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 SPRYD7Q5W111 196 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 MPHOSPH9Q99550 1183 aa8.32□□□□□ -1.08
LINC01001-202ENST00000527683 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
LINC01001-202ENST00000527683 IRX2Q9BZI1 471 aaPredicted RBP8.32□□□□□ -1.08
LINC01001-202ENST00000527683 C14orf93Q9H972 538 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms