RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 GRIN3BO60391 1043 aa30.53■■■□□ 2.48
TRAPPC4-208ENST00000527680 SSFA2P28290 1259 aa30.53■■■□□ 2.48
TRAPPC4-208ENST00000527680 ITPK1Q13572 414 aa30.53■■■□□ 2.48
TRAPPC4-208ENST00000527680 DCAF5Q96JK2 942 aa30.53■■■□□ 2.48
TRAPPC4-208ENST00000527680 RBM42Q9BTD8 480 aaKnown RBP30.53■■■□□ 2.48
TRAPPC4-208ENST00000527680 CD2APQ9Y5K6 639 aa30.53■■■□□ 2.48
TRAPPC4-208ENST00000527680 CABP4P57796 275 aa30.5■■■□□ 2.47
TRAPPC4-208ENST00000527680 C1orf141Q5JVX7 400 aa30.5■■■□□ 2.47
TRAPPC4-208ENST00000527680 AEBP1Q8IUX7 1158 aa30.5■■■□□ 2.47
TRAPPC4-208ENST00000527680 YBX3P16989 372 aaKnown RBP eCLIP30.49■■■□□ 2.47
TRAPPC4-208ENST00000527680 MTHFSP49914 203 aa30.49■■■□□ 2.47
TRAPPC4-208ENST00000527680 SULT6B1Q6IMI4 303 aa30.49■■■□□ 2.47
TRAPPC4-208ENST00000527680 PLEKHG2Q9H7P9 1386 aa30.49■■■□□ 2.47
TRAPPC4-208ENST00000527680 UBR3Q6ZT12 1888 aa30.48■■■□□ 2.47
TRAPPC4-208ENST00000527680 TRAPPC3LQ5T215 181 aa30.44■■■□□ 2.46
TRAPPC4-208ENST00000527680 RTCBQ9Y3I0 505 aaKnown RBP30.44■■■□□ 2.46
TRAPPC4-208ENST00000527680 KIF7Q2M1P5 1343 aa30.44■■■□□ 2.46
TRAPPC4-208ENST00000527680 AMER1Q5JTC6 1135 aaPredicted RBP30.43■■■□□ 2.46
TRAPPC4-208ENST00000527680 IL13P35225 146 aa30.42■■■□□ 2.46
TRAPPC4-208ENST00000527680 NFATC2IPQ8NCF5 419 aa30.41■■■□□ 2.46
TRAPPC4-208ENST00000527680 GOLGB1Q14789 3259 aaKnown RBP30.41■■■□□ 2.46
TRAPPC4-208ENST00000527680 SLC4A9Q96Q91 983 aa30.4■■■□□ 2.46
TRAPPC4-208ENST00000527680 WWC3Q9ULE0 1092 aa30.4■■■□□ 2.46
TRAPPC4-208ENST00000527680 PTCD1O75127 700 aaKnown RBP30.39■■■□□ 2.46
TRAPPC4-208ENST00000527680 KDM6AO15550 1401 aaPredicted RBP30.38■■■□□ 2.45
TRAPPC4-208ENST00000527680 CC2D1BQ5T0F9 858 aaKnown RBP30.37■■■□□ 2.45
TRAPPC4-208ENST00000527680 RC3H1Q5TC82 1133 aaKnown RBP30.37■■■□□ 2.45
TRAPPC4-208ENST00000527680 MMP10P09238 476 aa30.36■■■□□ 2.45
TRAPPC4-208ENST00000527680 RFC4P35249 363 aa30.35■■■□□ 2.45
TRAPPC4-208ENST00000527680 C1QTNF8P60827 252 aa30.35■■■□□ 2.45
TRAPPC4-208ENST00000527680 CNGB1Q14028 1251 aaPredicted RBP30.35■■■□□ 2.45
TRAPPC4-208ENST00000527680 NLGN1Q8N2Q7 840 aa30.35■■■□□ 2.45
TRAPPC4-208ENST00000527680 ARHGEF1Q92888 912 aaKnown RBP30.35■■■□□ 2.45
TRAPPC4-208ENST00000527680 KDRP35968 1356 aa30.35■■■□□ 2.45
TRAPPC4-208ENST00000527680 GIGYF1O75420 1035 aaPredicted RBP30.33■■■□□ 2.45
TRAPPC4-208ENST00000527680 RPS6KA4O75676 772 aa30.33■■■□□ 2.45
TRAPPC4-208ENST00000527680 HMOX1P09601 288 aa30.33■■■□□ 2.45
TRAPPC4-208ENST00000527680 ADRA2BP18089 450 aa30.32■■■□□ 2.44
TRAPPC4-208ENST00000527680 AKAP4Q5JQC9 854 aa30.32■■■□□ 2.44
TRAPPC4-208ENST00000527680 CNTNAP4Q9C0A0 1308 aa30.31■■■□□ 2.44
TRAPPC4-208ENST00000527680 PER1O15534 1290 aaPredicted RBP30.31■■■□□ 2.44
TRAPPC4-208ENST00000527680 DIAPH1O60610 1272 aaKnown RBP30.29■■■□□ 2.44
TRAPPC4-208ENST00000527680 SENP3-EIF4A1A0A087X0R7 540 aa30.28■■■□□ 2.44
TRAPPC4-208ENST00000527680 ZNF831Q5JPB2 1677 aa30.27■■■□□ 2.44
TRAPPC4-208ENST00000527680 LGR6Q9HBX8 967 aa30.27■■■□□ 2.44
TRAPPC4-208ENST00000527680 CRKLP46109 303 aaKnown RBP30.26■■■□□ 2.43
TRAPPC4-208ENST00000527680 PARP3Q9Y6F1 533 aa30.26■■■□□ 2.43
TRAPPC4-208ENST00000527680 GYS1P13807 737 aa30.25■■■□□ 2.43
TRAPPC4-208ENST00000527680 SLC52A2Q9HAB3 445 aa30.25■■■□□ 2.43
TRAPPC4-208ENST00000527680 CCDC87Q9NVE4 849 aa30.24■■■□□ 2.43
TRAPPC4-208ENST00000527680 COL5A3P25940 1745 aaPredicted RBP30.23■■■□□ 2.43
TRAPPC4-208ENST00000527680 RNMTO43148 476 aaKnown RBP30.23■■■□□ 2.43
TRAPPC4-208ENST00000527680 TGFB2P61812 414 aa30.23■■■□□ 2.43
TRAPPC4-208ENST00000527680 MYH14Q7Z406 1995 aaKnown RBP30.23■■■□□ 2.43
TRAPPC4-208ENST00000527680 SCN11AQ9UI33 1791 aa30.22■■■□□ 2.43
TRAPPC4-208ENST00000527680 A0A0G2JLW4 131 aa30.21■■■□□ 2.43
TRAPPC4-208ENST00000527680 MTHFSDQ2M296 383 aaKnown RBP30.21■■■□□ 2.43
TRAPPC4-208ENST00000527680 U2SURPO15042 1029 aaKnown RBP30.2■■■□□ 2.43
TRAPPC4-208ENST00000527680 SLC39A6Q13433 755 aa30.2■■■□□ 2.43
TRAPPC4-208ENST00000527680 ZNF526Q8TF50 670 aaPredicted RBP30.2■■■□□ 2.43
TRAPPC4-208ENST00000527680 GPBP1L1Q9HC44 474 aaPredicted RBP30.2■■■□□ 2.43
TRAPPC4-208ENST00000527680 ATP10DQ9P241 1426 aa30.2■■■□□ 2.42
TRAPPC4-208ENST00000527680 DNAJC10Q8IXB1 793 aa30.19■■■□□ 2.42
TRAPPC4-208ENST00000527680 SRP68Q9UHB9 627 aaKnown RBP30.19■■■□□ 2.42
TRAPPC4-208ENST00000527680 BCS1LQ9Y276 419 aa30.19■■■□□ 2.42
TRAPPC4-208ENST00000527680 CICQ96RK0 1608 aaPredicted RBP30.18■■■□□ 2.42
TRAPPC4-208ENST00000527680 INTS5Q6P9B9 1019 aaKnown RBP30.17■■■□□ 2.42
TRAPPC4-208ENST00000527680 ZPR1O75312 459 aa30.15■■■□□ 2.42
TRAPPC4-208ENST00000527680 DPEP1P16444 411 aa30.14■■■□□ 2.42
TRAPPC4-208ENST00000527680 FKBP8Q14318 412 aa30.14■■■□□ 2.42
TRAPPC4-208ENST00000527680 USP42Q9H9J4 1324 aaKnown RBP30.14■■■□□ 2.42
TRAPPC4-208ENST00000527680 PXDNLA1KZ92 1463 aa30.13■■■□□ 2.41
TRAPPC4-208ENST00000527680 N4BP2Q86UW6 1770 aaPredicted RBP30.13■■■□□ 2.41
TRAPPC4-208ENST00000527680 ARHGAP27Q6ZUM4 889 aa30.12■■■□□ 2.41
TRAPPC4-208ENST00000527680 NPC1L1Q9UHC9 1359 aa30.12■■■□□ 2.41
TRAPPC4-208ENST00000527680 C4AP0C0L4 1744 aa30.11■■■□□ 2.41
TRAPPC4-208ENST00000527680 FCHSD2O94868 740 aa30.11■■■□□ 2.41
TRAPPC4-208ENST00000527680 KIF13BQ9NQT8 1826 aa30.1■■■□□ 2.41
TRAPPC4-208ENST00000527680 CYP19A1P11511 503 aaPredicted RBP30.1■■■□□ 2.41
TRAPPC4-208ENST00000527680 C10orf71Q711Q0 1435 aa30.1■■■□□ 2.41
TRAPPC4-208ENST00000527680 TJP1Q07157 1748 aa30.1■■■□□ 2.41
TRAPPC4-208ENST00000527680 USPL1Q5W0Q7 1092 aa30.09■■■□□ 2.41
TRAPPC4-208ENST00000527680 TTC5Q8N0Z6 440 aa30.09■■■□□ 2.41
TRAPPC4-208ENST00000527680 VIRMAQ69YN4 1812 aaKnown RBP30.08■■■□□ 2.41
TRAPPC4-208ENST00000527680 GNAT3A8MTJ3 354 aa30.07■■■□□ 2.4
TRAPPC4-208ENST00000527680 TEFQ10587 303 aa30.07■■■□□ 2.4
TRAPPC4-208ENST00000527680 GAS2L2Q8NHY3 880 aa30.07■■■□□ 2.4
TRAPPC4-208ENST00000527680 CFAP53Q96M91 514 aa30.07■■■□□ 2.4
TRAPPC4-208ENST00000527680 ADCY9O60503 1353 aa30.06■■■□□ 2.4
TRAPPC4-208ENST00000527680 DDR1Q08345 913 aa30.06■■■□□ 2.4
TRAPPC4-208ENST00000527680 VSIG10Q8N0Z9 540 aa30.06■■■□□ 2.4
TRAPPC4-208ENST00000527680 PIM2Q9P1W9 311 aa30.06■■■□□ 2.4
TRAPPC4-208ENST00000527680 SOS1Q07889 1333 aaPredicted RBP30.05■■■□□ 2.4
TRAPPC4-208ENST00000527680 CANXP27824 592 aaKnown RBP30.04■■■□□ 2.4
TRAPPC4-208ENST00000527680 TM4SF1P30408 202 aa30.04■■■□□ 2.4
TRAPPC4-208ENST00000527680 ZBTB1Q9Y2K1 713 aa30.04■■■□□ 2.4
TRAPPC4-208ENST00000527680 MRC1P22897 1456 aa30.04■■■□□ 2.4
TRAPPC4-208ENST00000527680 STARD3NLO95772 234 aa30.03■■■□□ 2.4
TRAPPC4-208ENST00000527680 KCNA3P22001 575 aa30.03■■■□□ 2.4
TRAPPC4-208ENST00000527680 NARFQ9UHQ1 456 aa30.03■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms