RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 TOGARAM1Q9Y4F4 1720 aa17.55■□□□□ 0.4
SORL1-205ENST00000527649 EP400Q96L91 3159 aa17.55■□□□□ 0.4
SORL1-205ENST00000527649 A0A0G2JS52 829 aa17.55■□□□□ 0.4
SORL1-205ENST00000527649 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
SORL1-205ENST00000527649 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
SORL1-205ENST00000527649 C8orf58Q8NAV2 365 aa17.55■□□□□ 0.4
SORL1-205ENST00000527649 BTBD11A6QL63 1104 aa17.54■□□□□ 0.4
SORL1-205ENST00000527649 ELL2O00472 640 aaPredicted RBP17.53■□□□□ 0.4
SORL1-205ENST00000527649 KCNQ3O43525 872 aa17.53■□□□□ 0.4
SORL1-205ENST00000527649 CABP4P57796 275 aa17.53■□□□□ 0.4
SORL1-205ENST00000527649 KDM3BQ7LBC6 1761 aa17.52■□□□□ 0.4
SORL1-205ENST00000527649 ERVV-2B6SEH9 535 aa17.52■□□□□ 0.4
SORL1-205ENST00000527649 ZNF772Q68DY9 489 aaPredicted RBP17.52■□□□□ 0.4
SORL1-205ENST00000527649 BABAM1Q9NWV8 329 aa17.52■□□□□ 0.4
SORL1-205ENST00000527649 ONECUT3O60422 494 aaPredicted RBP17.51■□□□□ 0.39
SORL1-205ENST00000527649 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
SORL1-205ENST00000527649 RGS17Q9UGC6 210 aaPredicted RBP17.51■□□□□ 0.39
SORL1-205ENST00000527649 KAT6BQ8WYB5 2073 aa17.5■□□□□ 0.39
SORL1-205ENST00000527649 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
SORL1-205ENST00000527649 SEPT12Q8IYM1 358 aa17.5■□□□□ 0.39
SORL1-205ENST00000527649 VAMP4O75379 141 aa17.49■□□□□ 0.39
SORL1-205ENST00000527649 BCAR3O75815 825 aa17.49■□□□□ 0.39
SORL1-205ENST00000527649 RARSP54136 660 aaKnown RBP17.49■□□□□ 0.39
SORL1-205ENST00000527649 CT47B1P0C2W7 299 aaPredicted RBP17.48■□□□□ 0.39
SORL1-205ENST00000527649 EIF4A1P60842 406 aaKnown RBP17.48■□□□□ 0.39
SORL1-205ENST00000527649 BCL2L13Q9BXK5 485 aa17.48■□□□□ 0.39
SORL1-205ENST00000527649 DOT1LQ8TEK3 1739 aa17.48■□□□□ 0.39
SORL1-205ENST00000527649 FAM182BQ5T319 152 aa17.48■□□□□ 0.39
SORL1-205ENST00000527649 ZNF790Q6PG37 636 aa17.48■□□□□ 0.39
SORL1-205ENST00000527649 ITGB4P16144 1822 aa17.47■□□□□ 0.39
SORL1-205ENST00000527649 PIGBQ92521 554 aa17.47■□□□□ 0.39
SORL1-205ENST00000527649 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
SORL1-205ENST00000527649 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
SORL1-205ENST00000527649 PRIM1P49642 420 aaKnown RBP17.46■□□□□ 0.39
SORL1-205ENST00000527649 RBM6P78332 1123 aaKnown RBP17.46■□□□□ 0.39
SORL1-205ENST00000527649 ILDR1Q86SU0 546 aaPredicted RBP17.46■□□□□ 0.39
SORL1-205ENST00000527649 SSH1Q8WYL5 1049 aa17.46■□□□□ 0.39
SORL1-205ENST00000527649 SYTL4Q96C24 671 aaPredicted RBP17.46■□□□□ 0.39
SORL1-205ENST00000527649 ACSBG1Q96GR2 724 aa17.46■□□□□ 0.39
SORL1-205ENST00000527649 PLIN1O60240 522 aa17.45■□□□□ 0.38
SORL1-205ENST00000527649 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
SORL1-205ENST00000527649 RRP1P56182 461 aaKnown RBP17.45■□□□□ 0.38
SORL1-205ENST00000527649 BCL9O00512 1426 aa17.44■□□□□ 0.38
SORL1-205ENST00000527649 POTEAQ6S8J7 498 aa17.44■□□□□ 0.38
SORL1-205ENST00000527649 PAPPAQ13219 1627 aa17.44■□□□□ 0.38
SORL1-205ENST00000527649 HEG1Q9ULI3 1381 aa17.44■□□□□ 0.38
SORL1-205ENST00000527649 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
SORL1-205ENST00000527649 IRX6P78412 446 aaPredicted RBP17.43■□□□□ 0.38
SORL1-205ENST00000527649 TTC5Q8N0Z6 440 aa17.43■□□□□ 0.38
SORL1-205ENST00000527649 ZNF496Q96IT1 587 aaPredicted RBP17.43■□□□□ 0.38
SORL1-205ENST00000527649 SMC4Q9NTJ3 1288 aa17.43■□□□□ 0.38
SORL1-205ENST00000527649 KCNQ2O43526 872 aa17.43■□□□□ 0.38
SORL1-205ENST00000527649 ASAP1Q9ULH1 1129 aa17.43■□□□□ 0.38
SORL1-205ENST00000527649 BRWD3Q6RI45 1802 aa17.42■□□□□ 0.38
SORL1-205ENST00000527649 NECTIN2Q92692 538 aa17.42■□□□□ 0.38
SORL1-205ENST00000527649 GIGYF1O75420 1035 aaPredicted RBP17.41■□□□□ 0.38
SORL1-205ENST00000527649 RXRBP28702 533 aa17.41■□□□□ 0.38
SORL1-205ENST00000527649 ALDH1L2Q3SY69 923 aa17.41■□□□□ 0.38
SORL1-205ENST00000527649 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
SORL1-205ENST00000527649 KCPQ6ZWJ8 1503 aa17.41■□□□□ 0.38
SORL1-205ENST00000527649 UBR2Q8IWV8 1755 aa17.41■□□□□ 0.38
SORL1-205ENST00000527649 PTF1AQ7RTS3 328 aa17.4■□□□□ 0.38
SORL1-205ENST00000527649 ATG3Q9NT62 314 aa17.4■□□□□ 0.38
SORL1-205ENST00000527649 PTCD1O75127 700 aaKnown RBP17.4■□□□□ 0.38
SORL1-205ENST00000527649 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
SORL1-205ENST00000527649 C5P01031 1676 aa17.39■□□□□ 0.37
SORL1-205ENST00000527649 EIF2S2P20042 333 aaKnown RBP17.39■□□□□ 0.37
SORL1-205ENST00000527649 MRPL50Q8N5N7 158 aaKnown RBP17.39■□□□□ 0.37
SORL1-205ENST00000527649 FMNL2Q96PY5 1086 aa17.39■□□□□ 0.37
SORL1-205ENST00000527649 RGS12O14924 1447 aa17.39■□□□□ 0.37
SORL1-205ENST00000527649 HOXB7P09629 217 aa17.38■□□□□ 0.37
SORL1-205ENST00000527649 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
SORL1-205ENST00000527649 HDGFL1Q5TGJ6 251 aa17.38■□□□□ 0.37
SORL1-205ENST00000527649 KRT27Q7Z3Y8 459 aa17.38■□□□□ 0.37
SORL1-205ENST00000527649 SOS1Q07889 1333 aaPredicted RBP17.38■□□□□ 0.37
SORL1-205ENST00000527649 TNNQ9UQP3 1299 aa17.38■□□□□ 0.37
SORL1-205ENST00000527649 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
SORL1-205ENST00000527649 NOB1Q9ULX3 412 aaKnown RBP17.37■□□□□ 0.37
SORL1-205ENST00000527649 SNRPA1P09661 255 aaKnown RBP17.36■□□□□ 0.37
SORL1-205ENST00000527649 SLC4A2P04920 1241 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 BRPF1P55201 1214 aaPredicted RBP17.35■□□□□ 0.37
SORL1-205ENST00000527649 FKBP8Q14318 412 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 CCDC30Q5VVM6 783 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 USP16Q9Y5T5 823 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 NHSQ6T4R5 1651 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 SBF2Q86WG5 1849 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 NEFLP07196 543 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
SORL1-205ENST00000527649 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
SORL1-205ENST00000527649 KIF16BQ96L93 1317 aa17.34■□□□□ 0.37
SORL1-205ENST00000527649 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
SORL1-205ENST00000527649 RBM42Q9BTD8 480 aaKnown RBP17.34■□□□□ 0.37
SORL1-205ENST00000527649 CHPF2Q9P2E5 772 aa17.34■□□□□ 0.37
SORL1-205ENST00000527649 ANXA1P04083 346 aa17.33■□□□□ 0.37
SORL1-205ENST00000527649 G2E3Q7L622 706 aa17.33■□□□□ 0.37
SORL1-205ENST00000527649 STK31Q9BXU1 1019 aa17.33■□□□□ 0.37
SORL1-205ENST00000527649 TRIM27P14373 513 aa17.33■□□□□ 0.36
SORL1-205ENST00000527649 PROSER3Q2NL68 480 aa17.33■□□□□ 0.36
SORL1-205ENST00000527649 BTAF1O14981 1849 aa17.32■□□□□ 0.36
SORL1-205ENST00000527649 ZKSCAN2Q63HK3 967 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms