RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 ZWINTO95229 277 aa8.52□□□□□ -1.05
CTNND1-216ENST00000527467 SERPINC1P01008 464 aa8.52□□□□□ -1.05
CTNND1-216ENST00000527467 MCM3P25205 808 aa8.52□□□□□ -1.05
CTNND1-216ENST00000527467 TAF4BQ92750 862 aa8.52□□□□□ -1.05
CTNND1-216ENST00000527467 SMARCC1Q92922 1105 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-216ENST00000527467 KIF2AO00139 706 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-216ENST00000527467 JAKMIP3Q5VZ66 844 aa8.52□□□□□ -1.05
CTNND1-216ENST00000527467 DDX46Q7L014 1031 aaKnown RBP8.52□□□□□ -1.05
CTNND1-216ENST00000527467 CEP83Q9Y592 693 aa8.52□□□□□ -1.05
CTNND1-216ENST00000527467 FGD6Q6ZV73 1430 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 ROCK2O75116 1388 aaKnown RBP8.51□□□□□ -1.05
CTNND1-216ENST00000527467 TMEM94Q12767 1356 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 CBFA2T2O43439 604 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 FBF1Q8TES7 1133 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-216ENST00000527467 CCDC160A6NGH7 325 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 HSP90AB4PQ58FF6 505 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 PAXIP1Q6ZW49 1069 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-216ENST00000527467 CCDC113Q9H0I3 377 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 DACH1Q9UI36 760 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 CAMSAP2Q08AD1 1489 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 GCOM1H8Y6P7 765 aaPredicted RBP8.51□□□□□ -1.05
CTNND1-216ENST00000527467 FOXO3O43524 673 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 MYZAPP0CAP1 466 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.055e-6■■■□□ 17.8
CTNND1-216ENST00000527467 SOGA3Q5TF21 947 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 APBA3O96018 575 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 SARNPP82979 210 aaKnown RBP8.51□□□□□ -1.05
CTNND1-216ENST00000527467 CCDC148Q8NFR7 591 aa8.51□□□□□ -1.05
CTNND1-216ENST00000527467 SCAF11Q99590 1463 aaKnown RBP8.51□□□□□ -1.05
CTNND1-216ENST00000527467 CPS1P31327 1500 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 ATP7AQ04656 1500 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 ESPNB1AK53 854 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 NOL3O60936 208 aaKnown RBP8.5□□□□□ -1.05
CTNND1-216ENST00000527467 DESP17661 470 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 DDB1Q16531 1140 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 FAM177A1Q8N128 213 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-216ENST00000527467 ZMYND15Q9H091 742 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 CCDC192P0DO97 292 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 INTS3Q68E01 1043 aaKnown RBP8.5□□□□□ -1.05
CTNND1-216ENST00000527467 FILIP1Q7Z7B0 1213 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 UGGT1Q9NYU2 1555 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 UBE4AQ14139 1066 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 KRT27Q7Z3Y8 459 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 AIDAQ96BJ3 306 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 FEZ2Q9UHY8 353 aaPredicted RBP8.5□□□□□ -1.05
CTNND1-216ENST00000527467 PIK3R4Q99570 1358 aa8.5□□□□□ -1.05
CTNND1-216ENST00000527467 NEBLO76041 1014 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 MIPOL1Q8TD10 442 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 ZHX1Q9UKY1 873 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-216ENST00000527467 PUS7Q96PZ0 661 aaKnown RBP8.49□□□□□ -1.05
CTNND1-216ENST00000527467 HECW2Q9P2P5 1572 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 HSPA4P34932 840 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 CETN2P41208 172 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 FOSBP53539 338 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 IFFO1Q0D2I5 559 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 CCDC6Q16204 474 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.49□□□□□ -1.052e-8■□□□□ 11.3
CTNND1-216ENST00000527467 CDK5RAP3Q96JB5 506 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 PCF11O94913 1555 aaKnown RBP8.49□□□□□ -1.05
CTNND1-216ENST00000527467 ZFYP08048 801 aaPredicted RBP8.49□□□□□ -1.05
CTNND1-216ENST00000527467 STIM1Q13586 685 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 TMEM132AQ24JP5 1023 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 RALYLQ86SE5 291 aaKnown RBP8.49□□□□□ -1.05
CTNND1-216ENST00000527467 RBM28Q9NW13 759 aaKnown RBP8.49□□□□□ -1.05
CTNND1-216ENST00000527467 AFF2P51816 1311 aa8.49□□□□□ -1.05
CTNND1-216ENST00000527467 TMEM2Q9UHN6 1383 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 PDCP20941 246 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 CTR9Q6PD62 1173 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 CWC22Q9HCG8 908 aaKnown RBP8.48□□□□□ -1.05
CTNND1-216ENST00000527467 IFIT2P09913 472 aaKnown RBP8.48□□□□□ -1.05
CTNND1-216ENST00000527467 RFC1P35251 1148 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-216ENST00000527467 TEFQ10587 303 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 ARHGAP29Q52LW3 1261 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 SIN3AQ96ST3 1273 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 PLEKHO1Q53GL0 409 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-216ENST00000527467 ZNF396Q96N95 335 aaPredicted RBP8.48□□□□□ -1.05
CTNND1-216ENST00000527467 PRAM1Q96QH2 718 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 SPON1Q9HCB6 807 aa8.48□□□□□ -1.05
CTNND1-216ENST00000527467 ADCY10Q96PN6 1610 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 ZKSCAN2Q63HK3 967 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 DZIP1Q86YF9 867 aaKnown RBP8.47□□□□□ -1.05
CTNND1-216ENST00000527467 C22orf23Q9BZE7 217 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 KRT18P05783 430 aaKnown RBP8.47□□□□□ -1.05
CTNND1-216ENST00000527467 JMYQ8N9B5 988 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 DYNC1I1O14576 645 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 RNF168Q8IYW5 571 aaPredicted RBP8.47□□□□□ -1.05
CTNND1-216ENST00000527467 TCHPQ9BT92 498 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 SYCP2Q9BX26 1530 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 EPB41L2O43491 1005 aaKnown RBP8.47□□□□□ -1.05
CTNND1-216ENST00000527467 FERP16591 822 aa8.47□□□□□ -1.05
CTNND1-216ENST00000527467 IMMTQ16891 758 aaKnown RBP8.47□□□□□ -1.05
CTNND1-216ENST00000527467 KDM5DQ9BY66 1539 aa8.46□□□□□ -1.05
CTNND1-216ENST00000527467 GPATCH8Q9UKJ3 1502 aaKnown RBP8.46□□□□□ -1.05
CTNND1-216ENST00000527467 PRPF40AO75400 957 aaKnown RBP8.46□□□□□ -1.05
CTNND1-216ENST00000527467 PDIA4P13667 645 aaKnown RBP8.46□□□□□ -1.05
CTNND1-216ENST00000527467 ANAPC15P60006 121 aa8.46□□□□□ -1.05
CTNND1-216ENST00000527467 XPCQ01831 940 aaPredicted RBP8.46□□□□□ -1.05
CTNND1-216ENST00000527467 GRPEL1Q9HAV7 217 aa8.46□□□□□ -1.05
CTNND1-216ENST00000527467 PSMA5P28066 241 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms