RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 DIAPH1O60610 1272 aaKnown RBP14.15□□□□□ -0.14
PRPF40B-204ENST00000527253 ATP6V1AP38606 617 aa14.15□□□□□ -0.14
PRPF40B-204ENST00000527253 CABP4P57796 275 aa14.15□□□□□ -0.14
PRPF40B-204ENST00000527253 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
PRPF40B-204ENST00000527253 POLD1P28340 1107 aa14.14□□□□□ -0.15
PRPF40B-204ENST00000527253 C1orf141Q5JVX7 400 aa14.14□□□□□ -0.15
PRPF40B-204ENST00000527253 AK7Q96M32 723 aa14.14□□□□□ -0.15
PRPF40B-204ENST00000527253 UBR3Q6ZT12 1888 aa14.13□□□□□ -0.15
PRPF40B-204ENST00000527253 PHF14O94880 888 aa14.13□□□□□ -0.15
PRPF40B-204ENST00000527253 NFATC2IPQ8NCF5 419 aa14.13□□□□□ -0.15
PRPF40B-204ENST00000527253 FLAD1Q8NFF5 587 aa14.13□□□□□ -0.15
PRPF40B-204ENST00000527253 LGR6Q9HBX8 967 aa14.13□□□□□ -0.15
PRPF40B-204ENST00000527253 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-204ENST00000527253 MTHFSDQ2M296 383 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-204ENST00000527253 AKAP4Q5JQC9 854 aa14.12□□□□□ -0.15
PRPF40B-204ENST00000527253 NLGN2Q8NFZ4 835 aa14.12□□□□□ -0.15
PRPF40B-204ENST00000527253 RBM42Q9BTD8 480 aaKnown RBP14.12□□□□□ -0.15
PRPF40B-204ENST00000527253 HMGB2P26583 209 aaKnown RBP14.11□□□□□ -0.15
PRPF40B-204ENST00000527253 KLHL34Q8N239 644 aa14.11□□□□□ -0.15
PRPF40B-204ENST00000527253 DCAF8L1A6NGE4 600 aa14.1□□□□□ -0.15
PRPF40B-204ENST00000527253 GNPATO15228 680 aa14.1□□□□□ -0.15
PRPF40B-204ENST00000527253 RNMTO43148 476 aaKnown RBP14.1□□□□□ -0.15
PRPF40B-204ENST00000527253 SCN11AQ9UI33 1791 aa14.09□□□□□ -0.15
PRPF40B-204ENST00000527253 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
PRPF40B-204ENST00000527253 PTCD1O75127 700 aaKnown RBP14.09□□□□□ -0.15
PRPF40B-204ENST00000527253 YY1P25490 414 aa14.09□□□□□ -0.15
PRPF40B-204ENST00000527253 SSFA2P28290 1259 aa14.09□□□□□ -0.15
PRPF40B-204ENST00000527253 PPP2R1AP30153 589 aa14.09□□□□□ -0.15
PRPF40B-204ENST00000527253 SLC52A2Q9HAB3 445 aa14.08□□□□□ -0.16
PRPF40B-204ENST00000527253 ZNF831Q5JPB2 1677 aa14.07□□□□□ -0.16
PRPF40B-204ENST00000527253 MYH14Q7Z406 1995 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-204ENST00000527253 RC3H1Q5TC82 1133 aaKnown RBP14.07□□□□□ -0.16
PRPF40B-204ENST00000527253 CNTNAP4Q9C0A0 1308 aa14.07□□□□□ -0.16
PRPF40B-204ENST00000527253 SLC39A6Q13433 755 aa14.06□□□□□ -0.16
PRPF40B-204ENST00000527253 ARHGEF1Q92888 912 aaKnown RBP14.06□□□□□ -0.16
PRPF40B-204ENST00000527253 PHACTR3Q96KR7 559 aa14.06□□□□□ -0.16
PRPF40B-204ENST00000527253 COL5A3P25940 1745 aaPredicted RBP14.06□□□□□ -0.16
PRPF40B-204ENST00000527253 MRC1P22897 1456 aa14.06□□□□□ -0.16
PRPF40B-204ENST00000527253 ADAMTS7Q9UKP4 1686 aa14.05□□□□□ -0.16
PRPF40B-204ENST00000527253 RPS6KA4O75676 772 aa14.05□□□□□ -0.16
PRPF40B-204ENST00000527253 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
PRPF40B-204ENST00000527253 IL17REQ8NFR9 667 aa14.05□□□□□ -0.16
PRPF40B-204ENST00000527253 RTCBQ9Y3I0 505 aaKnown RBP14.05□□□□□ -0.16
PRPF40B-204ENST00000527253 CRKLP46109 303 aaKnown RBP14.04□□□□□ -0.16
PRPF40B-204ENST00000527253 GPR162Q16538 588 aa14.04□□□□□ -0.16
PRPF40B-204ENST00000527253 INTS5Q6P9B9 1019 aaKnown RBP14.04□□□□□ -0.16
PRPF40B-204ENST00000527253 DNAJC10Q8IXB1 793 aa14.04□□□□□ -0.16
PRPF40B-204ENST00000527253 RSPH6AQ9H0K4 717 aa14.04□□□□□ -0.16
PRPF40B-204ENST00000527253 CD2APQ9Y5K6 639 aa14.04□□□□□ -0.16
PRPF40B-204ENST00000527253 TJP1Q07157 1748 aa14.04□□□□□ -0.16
PRPF40B-204ENST00000527253 YBX3P16989 372 aaKnown RBP eCLIP14.03□□□□□ -0.16
PRPF40B-204ENST00000527253 PRKAR2BP31323 418 aa14.03□□□□□ -0.16
PRPF40B-204ENST00000527253 CFAP53Q96M91 514 aa14.03□□□□□ -0.16
PRPF40B-204ENST00000527253 VIRMAQ69YN4 1812 aaKnown RBP14.03□□□□□ -0.16
PRPF40B-204ENST00000527253 KCPQ6ZWJ8 1503 aa14.02□□□□□ -0.16
PRPF40B-204ENST00000527253 GYS1P13807 737 aa14.02□□□□□ -0.17
PRPF40B-204ENST00000527253 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.17
PRPF40B-204ENST00000527253 GNAT3A8MTJ3 354 aa14.01□□□□□ -0.17
PRPF40B-204ENST00000527253 MMP10P09238 476 aa14.01□□□□□ -0.17
PRPF40B-204ENST00000527253 ADRA2BP18089 450 aa14.01□□□□□ -0.17
PRPF40B-204ENST00000527253 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
PRPF40B-204ENST00000527253 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
PRPF40B-204ENST00000527253 UTRNP46939 3433 aa14□□□□□ -0.17
PRPF40B-204ENST00000527253 U2AF1L5P0DN76 240 aaPredicted RBP14□□□□□ -0.17
PRPF40B-204ENST00000527253 CYP19A1P11511 503 aaPredicted RBP14□□□□□ -0.17
PRPF40B-204ENST00000527253 U2AF1Q01081 240 aaKnown RBP eCLIP14□□□□□ -0.17
PRPF40B-204ENST00000527253 SRP68Q9UHB9 627 aaKnown RBP14□□□□□ -0.17
PRPF40B-204ENST00000527253 RFC4P35249 363 aa13.99□□□□□ -0.17
PRPF40B-204ENST00000527253 NLGN1Q8N2Q7 840 aa13.99□□□□□ -0.17
PRPF40B-204ENST00000527253 NUDCQ9Y266 331 aa13.99□□□□□ -0.17
PRPF40B-204ENST00000527253 CHD4Q14839 1912 aa13.98□□□□□ -0.17
PRPF40B-204ENST00000527253 FCHSD2O94868 740 aa13.98□□□□□ -0.17
PRPF40B-204ENST00000527253 ZNF784Q8NCA9 323 aaPredicted RBP13.98□□□□□ -0.17
PRPF40B-204ENST00000527253 CCDC87Q9NVE4 849 aa13.98□□□□□ -0.17
PRPF40B-204ENST00000527253 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
PRPF40B-204ENST00000527253 CEMIPQ8WUJ3 1361 aa13.97□□□□□ -0.17
PRPF40B-204ENST00000527253 SOS1Q07889 1333 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-204ENST00000527253 KCNQ3O43525 872 aa13.97□□□□□ -0.17
PRPF40B-204ENST00000527253 FKBP8Q14318 412 aa13.97□□□□□ -0.17
PRPF40B-204ENST00000527253 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
PRPF40B-204ENST00000527253 ZNF496Q96IT1 587 aaPredicted RBP13.97□□□□□ -0.17
PRPF40B-204ENST00000527253 WWC3Q9ULE0 1092 aa13.97□□□□□ -0.17
PRPF40B-204ENST00000527253 UBR2Q8IWV8 1755 aa13.96□□□□□ -0.17
PRPF40B-204ENST00000527253 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.17
PRPF40B-204ENST00000527253 TEFQ10587 303 aa13.96□□□□□ -0.17
PRPF40B-204ENST00000527253 ZNF790Q6PG37 636 aa13.96□□□□□ -0.17
PRPF40B-204ENST00000527253 ZBTB1Q9Y2K1 713 aa13.96□□□□□ -0.17
PRPF40B-204ENST00000527253 SIPA1L3O60292 1781 aaPredicted RBP13.96□□□□□ -0.18
PRPF40B-204ENST00000527253 GRIN3BO60391 1043 aa13.95□□□□□ -0.18
PRPF40B-204ENST00000527253 DDR1Q08345 913 aa13.95□□□□□ -0.18
PRPF40B-204ENST00000527253 MCM10Q7L590 875 aa13.95□□□□□ -0.18
PRPF40B-204ENST00000527253 TM4SF1P30408 202 aa13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 DDX10Q13206 875 aaKnown RBP13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 DCTN1Q14203 1278 aa13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 USPL1Q5W0Q7 1092 aa13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 C10orf71Q711Q0 1435 aa13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 TTC5Q8N0Z6 440 aa13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 BCL2L12Q9HB09 334 aa13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 KIAA1551Q9HCM1 1747 aa13.94□□□□□ -0.18
PRPF40B-204ENST00000527253 HEG1Q9ULI3 1381 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms