RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 WDR17Q8IZU2 1322 aa20.44■□□□□ 0.86
SNRNP35-204ENST00000527158 HOXB7P09629 217 aa20.44■□□□□ 0.86
SNRNP35-204ENST00000527158 BACH2Q9BYV9 841 aa20.44■□□□□ 0.86
SNRNP35-204ENST00000527158 IFNL2Q8IZJ0 200 aa20.43■□□□□ 0.86
SNRNP35-204ENST00000527158 RGS12O14924 1447 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 HDGFL1Q5TGJ6 251 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 TOM1L2Q6ZVM7 507 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 MEGF6O75095 1541 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 PHKG2P15735 406 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 G2E3Q7L622 706 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 NECTIN2Q92692 538 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 PDZRN3Q9UPQ7 1066 aa20.42■□□□□ 0.86
SNRNP35-204ENST00000527158 FLIIQ13045 1269 aa20.4■□□□□ 0.86
SNRNP35-204ENST00000527158 BCL11AQ9H165 835 aa20.4■□□□□ 0.86
SNRNP35-204ENST00000527158 EVA1CP58658 441 aa20.39■□□□□ 0.86
SNRNP35-204ENST00000527158 KDM3BQ7LBC6 1761 aa20.39■□□□□ 0.86
SNRNP35-204ENST00000527158 COL5A2P05997 1499 aaPredicted RBP20.39■□□□□ 0.85
SNRNP35-204ENST00000527158 KCNQ3O43525 872 aa20.39■□□□□ 0.85
SNRNP35-204ENST00000527158 HSP90AB1P08238 724 aaKnown RBP20.39■□□□□ 0.85
SNRNP35-204ENST00000527158 CCT4P50991 539 aaKnown RBP20.39■□□□□ 0.85
SNRNP35-204ENST00000527158 FKBP5Q13451 457 aaPredicted RBP20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 SMC5Q8IY18 1101 aa20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 C1orf115Q9H7X2 142 aa20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 ABCA3Q99758 1704 aa20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 EIF2S2P20042 333 aaKnown RBP20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 FAM161AQ3B820 660 aa20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 SLC4A10Q6U841 1118 aa20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 DCAF5Q96JK2 942 aa20.38■□□□□ 0.85
SNRNP35-204ENST00000527158 LTBP4Q8N2S1 1624 aa20.37■□□□□ 0.85
SNRNP35-204ENST00000527158 SLC52A2Q9HAB3 445 aa20.37■□□□□ 0.85
SNRNP35-204ENST00000527158 ADAMTS7Q9UKP4 1686 aa20.37■□□□□ 0.85
SNRNP35-204ENST00000527158 CARD10Q9BWT7 1032 aa20.36■□□□□ 0.85
SNRNP35-204ENST00000527158 F6X3S4 739 aa20.36■□□□□ 0.85
SNRNP35-204ENST00000527158 STRN4Q9NRL3 753 aa20.36■□□□□ 0.85
SNRNP35-204ENST00000527158 ROBO1Q9Y6N7 1651 aa20.36■□□□□ 0.85
SNRNP35-204ENST00000527158 CYP27B1O15528 508 aa20.35■□□□□ 0.85
SNRNP35-204ENST00000527158 GCC1Q96CN9 775 aa20.35■□□□□ 0.85
SNRNP35-204ENST00000527158 KDM6AO15550 1401 aaPredicted RBP20.35■□□□□ 0.85
SNRNP35-204ENST00000527158 VIRMAQ69YN4 1812 aaKnown RBP20.34■□□□□ 0.85
SNRNP35-204ENST00000527158 DDRGK1Q96HY6 314 aa20.34■□□□□ 0.85
SNRNP35-204ENST00000527158 CACNA1FO60840 1977 aa20.34■□□□□ 0.85
SNRNP35-204ENST00000527158 GIGYF1O75420 1035 aaPredicted RBP20.34■□□□□ 0.85
SNRNP35-204ENST00000527158 RTL5Q5HYW3 569 aaPredicted RBP20.34■□□□□ 0.85
SNRNP35-204ENST00000527158 NFATC2IPQ8NCF5 419 aa20.34■□□□□ 0.85
SNRNP35-204ENST00000527158 ZCRB1Q8TBF4 217 aaKnown RBP20.34■□□□□ 0.85
SNRNP35-204ENST00000527158 IL2RBP14784 551 aa20.33■□□□□ 0.85
SNRNP35-204ENST00000527158 AHDC1Q5TGY3 1603 aaPredicted RBP20.33■□□□□ 0.85
SNRNP35-204ENST00000527158 LARP1Q6PKG0 1096 aaKnown RBP20.33■□□□□ 0.85
SNRNP35-204ENST00000527158 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
SNRNP35-204ENST00000527158 HEG1Q9ULI3 1381 aa20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 ZNF790Q6PG37 636 aa20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 PCDH11XQ9BZA7 1347 aa20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 PCDH11YQ9BZA8 1340 aa20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 RPAP2Q8IXW5 612 aaPredicted RBP20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 CHPF2Q9P2E5 772 aa20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 DBF4Q9UBU7 674 aaPredicted RBP20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 SIPA1L3O60292 1781 aaPredicted RBP20.32■□□□□ 0.84
SNRNP35-204ENST00000527158 SCN11AQ9UI33 1791 aa20.31■□□□□ 0.84
SNRNP35-204ENST00000527158 NUCB1Q02818 461 aa20.31■□□□□ 0.84
SNRNP35-204ENST00000527158 SIRT2Q8IXJ6 389 aa20.31■□□□□ 0.84
SNRNP35-204ENST00000527158 MEIS3Q99687 375 aa20.31■□□□□ 0.84
SNRNP35-204ENST00000527158 C8orf34Q49A92 452 aa20.31■□□□□ 0.84
SNRNP35-204ENST00000527158 PHAXQ9H814 394 aaKnown RBP20.31■□□□□ 0.84
SNRNP35-204ENST00000527158 PARP4Q9UKK3 1724 aaKnown RBP20.3■□□□□ 0.84
SNRNP35-204ENST00000527158 DEKP35659 375 aaKnown RBP20.3■□□□□ 0.84
SNRNP35-204ENST00000527158 CABP4P57796 275 aa20.29■□□□□ 0.84
SNRNP35-204ENST00000527158 ANKRD44Q8N8A2 993 aa20.29■□□□□ 0.84
SNRNP35-204ENST00000527158 BTG4Q9NY30 223 aa20.29■□□□□ 0.84
SNRNP35-204ENST00000527158 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
SNRNP35-204ENST00000527158 SLC39A6Q13433 755 aa20.28■□□□□ 0.84
SNRNP35-204ENST00000527158 CHD1LQ86WJ1 897 aa20.28■□□□□ 0.84
SNRNP35-204ENST00000527158 TTC5Q8N0Z6 440 aa20.28■□□□□ 0.84
SNRNP35-204ENST00000527158 GNAI3P08754 354 aa20.28■□□□□ 0.84
SNRNP35-204ENST00000527158 PXDNLA1KZ92 1463 aa20.27■□□□□ 0.84
SNRNP35-204ENST00000527158 MRC1P22897 1456 aa20.27■□□□□ 0.84
SNRNP35-204ENST00000527158 TOM1O60784 492 aa20.27■□□□□ 0.83
SNRNP35-204ENST00000527158 ANKRD45Q5TZF3 282 aa20.27■□□□□ 0.83
SNRNP35-204ENST00000527158 CEP85Q6P2H3 762 aa20.27■□□□□ 0.83
SNRNP35-204ENST00000527158 GNAI2P04899 355 aa20.26■□□□□ 0.83
SNRNP35-204ENST00000527158 HYPKQ9NX55 129 aa20.25■□□□□ 0.83
SNRNP35-204ENST00000527158 NBR1Q14596 966 aa20.25■□□□□ 0.83
SNRNP35-204ENST00000527158 NPM2Q86SE8 214 aaKnown RBP20.25■□□□□ 0.83
SNRNP35-204ENST00000527158 LNPKQ9C0E8 428 aa20.25■□□□□ 0.83
SNRNP35-204ENST00000527158 DCTPP1Q9H773 170 aa20.25■□□□□ 0.83
SNRNP35-204ENST00000527158 COL22A1Q8NFW1 1626 aaPredicted RBP20.25■□□□□ 0.83
SNRNP35-204ENST00000527158 ATP10DQ9P241 1426 aa20.25■□□□□ 0.83
SNRNP35-204ENST00000527158 PRAMEF22A3QJZ6 481 aa20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 ERVV-2B6SEH9 535 aa20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 HMMRO75330 724 aa20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 NKX1-1Q15270 411 aaPredicted RBP20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 DDX54Q8TDD1 881 aaKnown RBP20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 COL14A1Q05707 1796 aaKnown RBP20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 ANXA1P04083 346 aa20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 DNAAF4Q8WXU2 420 aa20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 FMNL2Q96PY5 1086 aa20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 SRCIN1Q9C0H9 1055 aa20.24■□□□□ 0.83
SNRNP35-204ENST00000527158 PI4KAP2A4QPH2 592 aa20.23■□□□□ 0.83
SNRNP35-204ENST00000527158 PI4KAP1Q8N8J0 262 aa20.23■□□□□ 0.83
SNRNP35-204ENST00000527158 ZNF496Q96IT1 587 aaPredicted RBP20.23■□□□□ 0.83
SNRNP35-204ENST00000527158 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms