RNA–Protein interactions for RNA: ENST00000527045.1

FDFT1-211, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 1 (best)

Gene FDFT1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-211ENST00000527045 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.56□□□□□ -0.4
FDFT1-211ENST00000527045 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
FDFT1-211ENST00000527045 C10orf71Q711Q0 1435 aa12.55□□□□□ -0.4
FDFT1-211ENST00000527045 FAM208AQ9UK61 1670 aaKnown RBP12.55□□□□□ -0.4
FDFT1-211ENST00000527045 FCHSD2O94868 740 aa12.55□□□□□ -0.4
FDFT1-211ENST00000527045 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
FDFT1-211ENST00000527045 ARFGEF1Q9Y6D6 1849 aa12.55□□□□□ -0.4
FDFT1-211ENST00000527045 SBF1O95248 1867 aa12.55□□□□□ -0.4
FDFT1-211ENST00000527045 ZCRB1Q8TBF4 217 aaKnown RBP12.54□□□□□ -0.4
FDFT1-211ENST00000527045 KTN1Q86UP2 1357 aaKnown RBP12.54□□□□□ -0.4
FDFT1-211ENST00000527045 PALLDQ8WX93 1383 aa12.54□□□□□ -0.4
FDFT1-211ENST00000527045 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
FDFT1-211ENST00000527045 FOXN1O15353 648 aa12.53□□□□□ -0.4
FDFT1-211ENST00000527045 MMP10P09238 476 aa12.53□□□□□ -0.4
FDFT1-211ENST00000527045 PRDM10Q9NQV6 1147 aa12.53□□□□□ -0.4
FDFT1-211ENST00000527045 RNF181Q9P0P0 153 aa12.53□□□□□ -0.4
FDFT1-211ENST00000527045 DPEP1P16444 411 aa12.52□□□□□ -0.41
FDFT1-211ENST00000527045 TGFB2P61812 414 aa12.52□□□□□ -0.41
FDFT1-211ENST00000527045 NME9Q86XW9 330 aa12.52□□□□□ -0.41
FDFT1-211ENST00000527045 MEGF6O75095 1541 aa12.52□□□□□ -0.41
FDFT1-211ENST00000527045 ITGB4P16144 1822 aa12.51□□□□□ -0.41
FDFT1-211ENST00000527045 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
FDFT1-211ENST00000527045 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
FDFT1-211ENST00000527045 NSD3Q9BZ95 1437 aa12.51□□□□□ -0.41
FDFT1-211ENST00000527045 HMGB2P26583 209 aaKnown RBP12.5□□□□□ -0.41
FDFT1-211ENST00000527045 RGS19P49795 217 aa12.5□□□□□ -0.41
FDFT1-211ENST00000527045 MPRIPQ6WCQ1 1025 aa12.5□□□□□ -0.41
FDFT1-211ENST00000527045 MKRN1Q9UHC7 482 aaKnown RBP12.5□□□□□ -0.41
FDFT1-211ENST00000527045 USP31Q70CQ4 1352 aa12.5□□□□□ -0.41
FDFT1-211ENST00000527045 SSFA2P28290 1259 aa12.49□□□□□ -0.41
FDFT1-211ENST00000527045 IP6K1Q92551 441 aa12.48□□□□□ -0.41
FDFT1-211ENST00000527045 FARP1Q9Y4F1 1045 aaPredicted RBP12.48□□□□□ -0.41
FDFT1-211ENST00000527045 MAP2P11137 1827 aaKnown RBP12.47□□□□□ -0.41
FDFT1-211ENST00000527045 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
FDFT1-211ENST00000527045 C4AP0C0L4 1744 aa12.46□□□□□ -0.41
FDFT1-211ENST00000527045 GNPATO15228 680 aa12.46□□□□□ -0.41
FDFT1-211ENST00000527045 CD44P16070 742 aaKnown RBP12.46□□□□□ -0.41
FDFT1-211ENST00000527045 KCNA3P22001 575 aa12.46□□□□□ -0.41
FDFT1-211ENST00000527045 CCDC88AQ3V6T2 1871 aa12.46□□□□□ -0.42
FDFT1-211ENST00000527045 VEGFAP15692 232 aaPredicted RBP12.45□□□□□ -0.42
FDFT1-211ENST00000527045 CTCFP49711 727 aaPredicted RBP12.45□□□□□ -0.42
FDFT1-211ENST00000527045 DCAF5Q96JK2 942 aa12.45□□□□□ -0.42
FDFT1-211ENST00000527045 CCDC87Q9NVE4 849 aa12.45□□□□□ -0.42
FDFT1-211ENST00000527045 PIM2Q9P1W9 311 aa12.45□□□□□ -0.42
FDFT1-211ENST00000527045 LBX1P52954 281 aa12.44□□□□□ -0.42
FDFT1-211ENST00000527045 DALRD3Q5D0E6 543 aaKnown RBP12.44□□□□□ -0.42
FDFT1-211ENST00000527045 USHBP1Q8N6Y0 703 aa12.44□□□□□ -0.42
FDFT1-211ENST00000527045 SMARCC1Q92922 1105 aaPredicted RBP12.44□□□□□ -0.42
FDFT1-211ENST00000527045 AIDAQ96BJ3 306 aa12.44□□□□□ -0.42
FDFT1-211ENST00000527045 SBNO2Q9Y2G9 1366 aa12.43□□□□□ -0.42
FDFT1-211ENST00000527045 CREBZFQ9NS37 354 aa12.43□□□□□ -0.42
FDFT1-211ENST00000527045 TIAM2Q8IVF5 1701 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 LOC102724428A0A0B4J2F2 783 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 CCDC85CA6NKD9 419 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 SIK1P57059 783 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 TMF1P82094 1093 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 RASSF7Q02833 373 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 ITPK1Q13572 414 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 RAB3GAP2Q9H2M9 1393 aa12.42□□□□□ -0.42
FDFT1-211ENST00000527045 GLTPD2A6NH11 291 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 HOXC9P31274 260 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 NBPF6Q5VWK0 638 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 LHX8Q68G74 356 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 NLGN1Q8N2Q7 840 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 RAPGEF4Q8WZA2 1011 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 PIGBQ92521 554 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 NBPF4Q96M43 638 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 PARP3Q9Y6F1 533 aa12.41□□□□□ -0.42
FDFT1-211ENST00000527045 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
FDFT1-211ENST00000527045 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.42
FDFT1-211ENST00000527045 PCDH11XQ9BZA7 1347 aa12.4□□□□□ -0.42
FDFT1-211ENST00000527045 PCDH11YQ9BZA8 1340 aa12.4□□□□□ -0.42
FDFT1-211ENST00000527045 FBLN1P23142 703 aa12.4□□□□□ -0.42
FDFT1-211ENST00000527045 CNTNAP1P78357 1384 aa12.4□□□□□ -0.42
FDFT1-211ENST00000527045 CGNL1Q0VF96 1302 aa12.39□□□□□ -0.43
FDFT1-211ENST00000527045 MAP3K19Q56UN5 1328 aa12.39□□□□□ -0.43
FDFT1-211ENST00000527045 POTECB2RU33 542 aa12.39□□□□□ -0.43
FDFT1-211ENST00000527045 TATP17735 454 aaPredicted RBP12.39□□□□□ -0.43
FDFT1-211ENST00000527045 CHRNA5P30532 468 aa12.39□□□□□ -0.43
FDFT1-211ENST00000527045 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
FDFT1-211ENST00000527045 AMPHP49418 695 aa12.39□□□□□ -0.43
FDFT1-211ENST00000527045 TRAPPC3LQ5T215 181 aa12.39□□□□□ -0.43
FDFT1-211ENST00000527045 TNRC18O15417 2968 aaPredicted RBP12.39□□□□□ -0.43
FDFT1-211ENST00000527045 ZC3H4Q9UPT8 1303 aaKnown RBP12.38□□□□□ -0.43
FDFT1-211ENST00000527045 CYP27B1O15528 508 aa12.38□□□□□ -0.43
FDFT1-211ENST00000527045 GYS1P13807 737 aa12.38□□□□□ -0.43
FDFT1-211ENST00000527045 CLCN6P51797 869 aa12.38□□□□□ -0.43
FDFT1-211ENST00000527045 PDE4DIPQ5VU43 2346 aa12.38□□□□□ -0.43
FDFT1-211ENST00000527045 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
FDFT1-211ENST00000527045 HSPA8P11142 646 aaKnown RBP12.37□□□□□ -0.43
FDFT1-211ENST00000527045 VEGFBP49765 207 aa12.37□□□□□ -0.43
FDFT1-211ENST00000527045 TMC1Q8TDI8 760 aa12.37□□□□□ -0.43
FDFT1-211ENST00000527045 WBP1LQ9NX94 342 aa12.37□□□□□ -0.43
FDFT1-211ENST00000527045 RTCBQ9Y3I0 505 aaKnown RBP12.37□□□□□ -0.43
FDFT1-211ENST00000527045 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
FDFT1-211ENST00000527045 LMNB1P20700 586 aa12.36□□□□□ -0.43
FDFT1-211ENST00000527045 HDGFL2Q7Z4V5 671 aaPredicted RBP12.36□□□□□ -0.43
FDFT1-211ENST00000527045 ARHGEF1Q92888 912 aaKnown RBP12.36□□□□□ -0.43
FDFT1-211ENST00000527045 ASAP1Q9ULH1 1129 aa12.36□□□□□ -0.43
FDFT1-211ENST00000527045 POTEIP0CG38 1075 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms