RNA–Protein interactions for RNA: ENST00000526988.1

BEST1-205, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-205ENST00000526988 LINC00116Q8NCU8 138 aa21.86■■□□□ 1.09
BEST1-205ENST00000526988 PHF14O94880 888 aa21.85■■□□□ 1.09
BEST1-205ENST00000526988 KLHL34Q8N239 644 aa21.85■■□□□ 1.09
BEST1-205ENST00000526988 NFATC2IPQ8NCF5 419 aa21.85■■□□□ 1.09
BEST1-205ENST00000526988 SYT17Q9BSW7 474 aa21.85■■□□□ 1.09
BEST1-205ENST00000526988 MSL1Q68DK7 614 aa21.84■■□□□ 1.09
BEST1-205ENST00000526988 SMIM5Q71RC9 77 aa21.84■■□□□ 1.09
BEST1-205ENST00000526988 C5P01031 1676 aa21.83■■□□□ 1.09
BEST1-205ENST00000526988 PPP2R1AP30153 589 aa21.83■■□□□ 1.09
BEST1-205ENST00000526988 MTHFSDQ2M296 383 aaKnown RBP21.83■■□□□ 1.09
BEST1-205ENST00000526988 LGR6Q9HBX8 967 aa21.82■■□□□ 1.08
BEST1-205ENST00000526988 QSER1Q2KHR3 1735 aa21.81■■□□□ 1.08
BEST1-205ENST00000526988 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.81■■□□□ 1.08
BEST1-205ENST00000526988 GNPATO15228 680 aa21.81■■□□□ 1.08
BEST1-205ENST00000526988 PTCD1O75127 700 aaKnown RBP21.81■■□□□ 1.08
BEST1-205ENST00000526988 AMIGO3Q86WK7 504 aa21.81■■□□□ 1.08
BEST1-205ENST00000526988 COL3A1P02461 1466 aaPredicted RBP21.81■■□□□ 1.08
BEST1-205ENST00000526988 TUBGCP6Q96RT7 1819 aa21.8■■□□□ 1.08
BEST1-205ENST00000526988 SLC4A9Q96Q91 983 aa21.8■■□□□ 1.08
BEST1-205ENST00000526988 NUDCQ9Y266 331 aa21.8■■□□□ 1.08
BEST1-205ENST00000526988 C4BP0C0L5 1744 aa21.8■■□□□ 1.08
BEST1-205ENST00000526988 RNMTO43148 476 aaKnown RBP21.79■■□□□ 1.08
BEST1-205ENST00000526988 SSFA2P28290 1259 aa21.78■■□□□ 1.08
BEST1-205ENST00000526988 SLC52A2Q9HAB3 445 aa21.78■■□□□ 1.08
BEST1-205ENST00000526988 TAF1LQ8IZX4 1826 aa21.76■■□□□ 1.07
BEST1-205ENST00000526988 U2AF1L5P0DN76 240 aaPredicted RBP21.76■■□□□ 1.07
BEST1-205ENST00000526988 U2AF1Q01081 240 aaKnown RBP eCLIP21.76■■□□□ 1.07
BEST1-205ENST00000526988 PRKAR2BP31323 418 aa21.75■■□□□ 1.07
BEST1-205ENST00000526988 GAS2L2Q8NHY3 880 aa21.75■■□□□ 1.07
BEST1-205ENST00000526988 RTCBQ9Y3I0 505 aaKnown RBP21.75■■□□□ 1.07
BEST1-205ENST00000526988 MAP3K5Q99683 1374 aa21.74■■□□□ 1.07
BEST1-205ENST00000526988 SLC39A6Q13433 755 aa21.73■■□□□ 1.07
BEST1-205ENST00000526988 TRAPPC3LQ5T215 181 aa21.73■■□□□ 1.07
BEST1-205ENST00000526988 RC3H1Q5TC82 1133 aaKnown RBP21.73■■□□□ 1.07
BEST1-205ENST00000526988 GNAT3A8MTJ3 354 aa21.72■■□□□ 1.07
BEST1-205ENST00000526988 PHACTR3Q96KR7 559 aa21.72■■□□□ 1.07
BEST1-205ENST00000526988 RSPH6AQ9H0K4 717 aa21.72■■□□□ 1.07
BEST1-205ENST00000526988 CNTNAP4Q9C0A0 1308 aa21.71■■□□□ 1.07
BEST1-205ENST00000526988 RPS6KA4O75676 772 aa21.7■■□□□ 1.06
BEST1-205ENST00000526988 YY1P25490 414 aa21.7■■□□□ 1.06
BEST1-205ENST00000526988 DDX10Q13206 875 aaKnown RBP21.7■■□□□ 1.06
BEST1-205ENST00000526988 GPR162Q16538 588 aa21.7■■□□□ 1.06
BEST1-205ENST00000526988 PELP1Q8IZL8 1130 aaKnown RBP21.7■■□□□ 1.06
BEST1-205ENST00000526988 NLGN2Q8NFZ4 835 aa21.7■■□□□ 1.06
BEST1-205ENST00000526988 CRKLP46109 303 aaKnown RBP21.69■■□□□ 1.06
BEST1-205ENST00000526988 TEFQ10587 303 aa21.69■■□□□ 1.06
BEST1-205ENST00000526988 IL17REQ8NFR9 667 aa21.69■■□□□ 1.06
BEST1-205ENST00000526988 ARHGEF1Q92888 912 aaKnown RBP21.69■■□□□ 1.06
BEST1-205ENST00000526988 SCN11AQ9UI33 1791 aa21.69■■□□□ 1.06
BEST1-205ENST00000526988 RFC4P35249 363 aa21.68■■□□□ 1.06
BEST1-205ENST00000526988 DNAJC10Q8IXB1 793 aa21.68■■□□□ 1.06
BEST1-205ENST00000526988 UBR3Q6ZT12 1888 aa21.68■■□□□ 1.06
BEST1-205ENST00000526988 COL24A1Q17RW2 1714 aa21.67■■□□□ 1.06
BEST1-205ENST00000526988 FCHSD2O94868 740 aa21.67■■□□□ 1.06
BEST1-205ENST00000526988 ADRA2BP18089 450 aa21.67■■□□□ 1.06
BEST1-205ENST00000526988 MRC1P22897 1456 aa21.66■■□□□ 1.06
BEST1-205ENST00000526988 TTC5Q8N0Z6 440 aa21.66■■□□□ 1.06
BEST1-205ENST00000526988 CD2APQ9Y5K6 639 aa21.65■■□□□ 1.06
BEST1-205ENST00000526988 ZNF831Q5JPB2 1677 aa21.64■■□□□ 1.05
BEST1-205ENST00000526988 MMP10P09238 476 aa21.64■■□□□ 1.05
BEST1-205ENST00000526988 INTS5Q6P9B9 1019 aaKnown RBP21.64■■□□□ 1.05
BEST1-205ENST00000526988 NLGN1Q8N2Q7 840 aa21.64■■□□□ 1.05
BEST1-205ENST00000526988 RTF1Q92541 710 aaKnown RBP21.63■■□□□ 1.05
BEST1-205ENST00000526988 CCDC87Q9NVE4 849 aa21.63■■□□□ 1.05
BEST1-205ENST00000526988 NEFMP07197 916 aa21.62■■□□□ 1.05
BEST1-205ENST00000526988 RALBP1Q15311 655 aa21.62■■□□□ 1.05
BEST1-205ENST00000526988 CYP19A1P11511 503 aaPredicted RBP21.61■■□□□ 1.05
BEST1-205ENST00000526988 GYS1P13807 737 aa21.61■■□□□ 1.05
BEST1-205ENST00000526988 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
BEST1-205ENST00000526988 VSIG10Q8N0Z9 540 aa21.6■■□□□ 1.05
BEST1-205ENST00000526988 SRP68Q9UHB9 627 aaKnown RBP21.6■■□□□ 1.05
BEST1-205ENST00000526988 COL5A3P25940 1745 aaPredicted RBP21.6■■□□□ 1.05
BEST1-205ENST00000526988 ADAMTS7Q9UKP4 1686 aa21.6■■□□□ 1.05
BEST1-205ENST00000526988 BTBD11A6QL63 1104 aa21.59■■□□□ 1.05
BEST1-205ENST00000526988 MCM10Q7L590 875 aa21.59■■□□□ 1.05
BEST1-205ENST00000526988 ZNF496Q96IT1 587 aaPredicted RBP21.59■■□□□ 1.05
BEST1-205ENST00000526988 KCPQ6ZWJ8 1503 aa21.59■■□□□ 1.05
BEST1-205ENST00000526988 STARD3NLO95772 234 aa21.58■■□□□ 1.05
BEST1-205ENST00000526988 CEMIPQ8WUJ3 1361 aa21.58■■□□□ 1.04
BEST1-205ENST00000526988 TJP1Q07157 1748 aa21.58■■□□□ 1.04
BEST1-205ENST00000526988 DCTN1Q14203 1278 aa21.57■■□□□ 1.04
BEST1-205ENST00000526988 USP42Q9H9J4 1324 aaKnown RBP21.56■■□□□ 1.04
BEST1-205ENST00000526988 ZPR1O75312 459 aa21.56■■□□□ 1.04
BEST1-205ENST00000526988 YBX3P16989 372 aaKnown RBP eCLIP21.56■■□□□ 1.04
BEST1-205ENST00000526988 CANXP27824 592 aaKnown RBP21.56■■□□□ 1.04
BEST1-205ENST00000526988 FMNL2Q96PY5 1086 aa21.56■■□□□ 1.04
BEST1-205ENST00000526988 ZBTB1Q9Y2K1 713 aa21.56■■□□□ 1.04
BEST1-205ENST00000526988 PARP3Q9Y6F1 533 aa21.56■■□□□ 1.04
BEST1-205ENST00000526988 MYH14Q7Z406 1995 aaKnown RBP21.56■■□□□ 1.04
BEST1-205ENST00000526988 SOS1Q07889 1333 aaPredicted RBP21.55■■□□□ 1.04
BEST1-205ENST00000526988 KCNQ3O43525 872 aa21.55■■□□□ 1.04
BEST1-205ENST00000526988 HTATSF1O43719 755 aaKnown RBP21.55■■□□□ 1.04
BEST1-205ENST00000526988 FKBP8Q14318 412 aa21.55■■□□□ 1.04
BEST1-205ENST00000526988 TEX13AQ9BXU3 409 aaPredicted RBP21.55■■□□□ 1.04
BEST1-205ENST00000526988 WWC3Q9ULE0 1092 aa21.55■■□□□ 1.04
BEST1-205ENST00000526988 HEG1Q9ULI3 1381 aa21.54■■□□□ 1.04
BEST1-205ENST00000526988 GRIN3BO60391 1043 aa21.54■■□□□ 1.04
BEST1-205ENST00000526988 ZEB1P37275 1124 aaPredicted RBP21.54■■□□□ 1.04
BEST1-205ENST00000526988 PNNQ9H307 717 aaKnown RBP21.54■■□□□ 1.04
BEST1-205ENST00000526988 USPL1Q5W0Q7 1092 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms