RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ASAP1Q9ULH1 1129 aa25.92■■□□□ 1.74
PKP3-204ENST00000526971 CEP350Q5VT06 3117 aa25.91■■□□□ 1.74
PKP3-204ENST00000526971 PHKG2P15735 406 aa25.91■■□□□ 1.74
PKP3-204ENST00000526971 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.91■■□□□ 1.74
PKP3-204ENST00000526971 HMGB2P26583 209 aaKnown RBP25.9■■□□□ 1.74
PKP3-204ENST00000526971 TMOD3Q9NYL9 352 aa25.9■■□□□ 1.74
PKP3-204ENST00000526971 KIAA1551Q9HCM1 1747 aa25.9■■□□□ 1.74
PKP3-204ENST00000526971 ADCY9O60503 1353 aa25.9■■□□□ 1.74
PKP3-204ENST00000526971 COL5A3P25940 1745 aaPredicted RBP25.89■■□□□ 1.74
PKP3-204ENST00000526971 SSFA2P28290 1259 aa25.89■■□□□ 1.74
PKP3-204ENST00000526971 EIF4A2Q14240 407 aaKnown RBP25.89■■□□□ 1.74
PKP3-204ENST00000526971 KIF13BQ9NQT8 1826 aa25.88■■□□□ 1.73
PKP3-204ENST00000526971 KDRP35968 1356 aa25.88■■□□□ 1.73
PKP3-204ENST00000526971 WWC3Q9ULE0 1092 aa25.88■■□□□ 1.73
PKP3-204ENST00000526971 IGSF1Q8N6C5 1336 aa25.88■■□□□ 1.73
PKP3-204ENST00000526971 ZNF831Q5JPB2 1677 aa25.87■■□□□ 1.73
PKP3-204ENST00000526971 IFNL2Q8IZJ0 200 aa25.87■■□□□ 1.73
PKP3-204ENST00000526971 ATG3Q9NT62 314 aa25.86■■□□□ 1.73
PKP3-204ENST00000526971 GNPATO15228 680 aa25.85■■□□□ 1.73
PKP3-204ENST00000526971 N4BP2Q86UW6 1770 aaPredicted RBP25.84■■□□□ 1.73
PKP3-204ENST00000526971 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
PKP3-204ENST00000526971 CNGB1Q14028 1251 aaPredicted RBP25.84■■□□□ 1.73
PKP3-204ENST00000526971 MYH14Q7Z406 1995 aaKnown RBP25.84■■□□□ 1.73
PKP3-204ENST00000526971 SLC4A9Q96Q91 983 aa25.83■■□□□ 1.73
PKP3-204ENST00000526971 CICQ96RK0 1608 aaPredicted RBP25.83■■□□□ 1.73
PKP3-204ENST00000526971 C4AP0C0L4 1744 aa25.83■■□□□ 1.72
PKP3-204ENST00000526971 MTHFSP49914 203 aa25.82■■□□□ 1.72
PKP3-204ENST00000526971 PLEKHG2Q9H7P9 1386 aa25.82■■□□□ 1.72
PKP3-204ENST00000526971 KDM6AO15550 1401 aaPredicted RBP25.81■■□□□ 1.72
PKP3-204ENST00000526971 PXDNLA1KZ92 1463 aa25.79■■□□□ 1.72
PKP3-204ENST00000526971 BRCA1P38398 1863 aaKnown RBP25.78■■□□□ 1.72
PKP3-204ENST00000526971 MMP10P09238 476 aa25.77■■□□□ 1.72
PKP3-204ENST00000526971 IL13P35225 146 aa25.77■■□□□ 1.72
PKP3-204ENST00000526971 ZNF526Q8TF50 670 aaPredicted RBP25.77■■□□□ 1.72
PKP3-204ENST00000526971 GPBP1L1Q9HC44 474 aaPredicted RBP25.77■■□□□ 1.72
PKP3-204ENST00000526971 TJP1Q07157 1748 aa25.75■■□□□ 1.71
PKP3-204ENST00000526971 C10orf71Q711Q0 1435 aa25.74■■□□□ 1.71
PKP3-204ENST00000526971 ERVV-2B6SEH9 535 aa25.74■■□□□ 1.71
PKP3-204ENST00000526971 AEBP1Q8IUX7 1158 aa25.73■■□□□ 1.71
PKP3-204ENST00000526971 DCAF5Q96JK2 942 aa25.73■■□□□ 1.71
PKP3-204ENST00000526971 RBM42Q9BTD8 480 aaKnown RBP25.73■■□□□ 1.71
PKP3-204ENST00000526971 SCN11AQ9UI33 1791 aa25.72■■□□□ 1.71
PKP3-204ENST00000526971 ZNF530Q6P9A1 599 aaPredicted RBP25.72■■□□□ 1.71
PKP3-204ENST00000526971 RTCBQ9Y3I0 505 aaKnown RBP25.72■■□□□ 1.71
PKP3-204ENST00000526971 CNTNAP4Q9C0A0 1308 aa25.71■■□□□ 1.71
PKP3-204ENST00000526971 VIRMAQ69YN4 1812 aaKnown RBP25.71■■□□□ 1.71
PKP3-204ENST00000526971 DDX10Q13206 875 aaKnown RBP25.7■■□□□ 1.7
PKP3-204ENST00000526971 PLEKHO1Q53GL0 409 aaPredicted RBP25.7■■□□□ 1.7
PKP3-204ENST00000526971 TRAPPC3LQ5T215 181 aa25.7■■□□□ 1.7
PKP3-204ENST00000526971 ARHGEF1Q92888 912 aaKnown RBP25.7■■□□□ 1.7
PKP3-204ENST00000526971 DIAPH1O60610 1272 aaKnown RBP25.69■■□□□ 1.7
PKP3-204ENST00000526971 HSP90AB1P08238 724 aaKnown RBP25.69■■□□□ 1.7
PKP3-204ENST00000526971 ADAMTS7Q9UKP4 1686 aa25.68■■□□□ 1.7
PKP3-204ENST00000526971 GYS1P13807 737 aa25.68■■□□□ 1.7
PKP3-204ENST00000526971 PPP2R1AP30153 589 aa25.68■■□□□ 1.7
PKP3-204ENST00000526971 RC3H1Q5TC82 1133 aaKnown RBP25.68■■□□□ 1.7
PKP3-204ENST00000526971 SULT6B1Q6IMI4 303 aa25.68■■□□□ 1.7
PKP3-204ENST00000526971 ARFGEF1Q9Y6D6 1849 aa25.67■■□□□ 1.7
PKP3-204ENST00000526971 A0A0G2JLW4 131 aa25.66■■□□□ 1.7
PKP3-204ENST00000526971 RPS6KA4O75676 772 aa25.66■■□□□ 1.7
PKP3-204ENST00000526971 ADRA2BP18089 450 aa25.66■■□□□ 1.7
PKP3-204ENST00000526971 CABP4P57796 275 aa25.66■■□□□ 1.7
PKP3-204ENST00000526971 KIF3CO14782 793 aa25.65■■□□□ 1.7
PKP3-204ENST00000526971 AMOTQ4VCS5 1084 aa25.65■■□□□ 1.7
PKP3-204ENST00000526971 NLGN1Q8N2Q7 840 aa25.65■■□□□ 1.7
PKP3-204ENST00000526971 PTCD1O75127 700 aaKnown RBP25.63■■□□□ 1.69
PKP3-204ENST00000526971 HSPA6P17066 643 aa25.63■■□□□ 1.69
PKP3-204ENST00000526971 TGFB2P61812 414 aa25.63■■□□□ 1.69
PKP3-204ENST00000526971 CFAP53Q96M91 514 aa25.63■■□□□ 1.69
PKP3-204ENST00000526971 BCS1LQ9Y276 419 aa25.63■■□□□ 1.69
PKP3-204ENST00000526971 COL3A1P02461 1466 aaPredicted RBP25.62■■□□□ 1.69
PKP3-204ENST00000526971 DPEP1P16444 411 aa25.62■■□□□ 1.69
PKP3-204ENST00000526971 RFC4P35249 363 aa25.61■■□□□ 1.69
PKP3-204ENST00000526971 CRKLP46109 303 aaKnown RBP25.61■■□□□ 1.69
PKP3-204ENST00000526971 NFATC2IPQ8NCF5 419 aa25.61■■□□□ 1.69
PKP3-204ENST00000526971 CCDC87Q9NVE4 849 aa25.61■■□□□ 1.69
PKP3-204ENST00000526971 HMOX1P09601 288 aa25.6■■□□□ 1.69
PKP3-204ENST00000526971 C1orf141Q5JVX7 400 aa25.6■■□□□ 1.69
PKP3-204ENST00000526971 SRP68Q9UHB9 627 aaKnown RBP25.6■■□□□ 1.69
PKP3-204ENST00000526971 U2SURPO15042 1029 aaKnown RBP25.58■■□□□ 1.69
PKP3-204ENST00000526971 KCNA3P22001 575 aa25.58■■□□□ 1.69
PKP3-204ENST00000526971 PARP3Q9Y6F1 533 aa25.58■■□□□ 1.69
PKP3-204ENST00000526971 DDR1Q08345 913 aa25.57■■□□□ 1.68
PKP3-204ENST00000526971 FKBP8Q14318 412 aa25.57■■□□□ 1.68
PKP3-204ENST00000526971 MRC1P22897 1456 aa25.57■■□□□ 1.68
PKP3-204ENST00000526971 USP42Q9H9J4 1324 aaKnown RBP25.57■■□□□ 1.68
PKP3-204ENST00000526971 AFDNP55196 1824 aaKnown RBP25.56■■□□□ 1.68
PKP3-204ENST00000526971 FCHSD2O94868 740 aa25.55■■□□□ 1.68
PKP3-204ENST00000526971 RALBP1Q15311 655 aa25.55■■□□□ 1.68
PKP3-204ENST00000526971 ARHGAP27Q6ZUM4 889 aa25.55■■□□□ 1.68
PKP3-204ENST00000526971 SBF1O95248 1867 aa25.54■■□□□ 1.68
PKP3-204ENST00000526971 INTS5Q6P9B9 1019 aaKnown RBP25.54■■□□□ 1.68
PKP3-204ENST00000526971 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
PKP3-204ENST00000526971 KCPQ6ZWJ8 1503 aa25.53■■□□□ 1.68
PKP3-204ENST00000526971 IFFO2Q5TF58 517 aa25.52■■□□□ 1.68
PKP3-204ENST00000526971 LGR6Q9HBX8 967 aa25.52■■□□□ 1.68
PKP3-204ENST00000526971 UBR2Q8IWV8 1755 aa25.51■■□□□ 1.67
PKP3-204ENST00000526971 ZNF316A6NFI3 1004 aaPredicted RBP25.51■■□□□ 1.67
PKP3-204ENST00000526971 DNAJC10Q8IXB1 793 aa25.51■■□□□ 1.67
PKP3-204ENST00000526971 NMRK2Q9NPI5 230 aa25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms