RNA–Protein interactions for RNA: ENST00000526966.5

CAPN1-206, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-206ENST00000526966 ATG3Q9NT62 314 aa25.85■■□□□ 1.73
CAPN1-206ENST00000526966 ATP6V1AP38606 617 aa25.84■■□□□ 1.73
CAPN1-206ENST00000526966 CEP350Q5VT06 3117 aa25.83■■□□□ 1.73
CAPN1-206ENST00000526966 GNPATO15228 680 aa25.83■■□□□ 1.73
CAPN1-206ENST00000526966 TNNT2P45379 298 aaPredicted RBP25.83■■□□□ 1.73
CAPN1-206ENST00000526966 POLR3GLQ9BT43 218 aa25.83■■□□□ 1.73
CAPN1-206ENST00000526966 KIAA1551Q9HCM1 1747 aa25.82■■□□□ 1.72
CAPN1-206ENST00000526966 CICQ96RK0 1608 aaPredicted RBP25.81■■□□□ 1.72
CAPN1-206ENST00000526966 ERVV-2B6SEH9 535 aa25.79■■□□□ 1.72
CAPN1-206ENST00000526966 KDM6AO15550 1401 aaPredicted RBP25.79■■□□□ 1.72
CAPN1-206ENST00000526966 EIF4G2P78344 907 aaKnown RBP eCLIP25.78■■□□□ 1.72
CAPN1-206ENST00000526966 DCAF5Q96JK2 942 aa25.78■■□□□ 1.72
CAPN1-206ENST00000526966 SLC4A9Q96Q91 983 aa25.78■■□□□ 1.72
CAPN1-206ENST00000526966 MYH14Q7Z406 1995 aaKnown RBP25.78■■□□□ 1.72
CAPN1-206ENST00000526966 HSP90AB1P08238 724 aaKnown RBP25.77■■□□□ 1.72
CAPN1-206ENST00000526966 HSPA5P11021 654 aaKnown RBP25.77■■□□□ 1.72
CAPN1-206ENST00000526966 PANK3Q9H999 370 aa25.77■■□□□ 1.72
CAPN1-206ENST00000526966 C4AP0C0L4 1744 aa25.77■■□□□ 1.72
CAPN1-206ENST00000526966 N4BP2Q86UW6 1770 aaPredicted RBP25.74■■□□□ 1.71
CAPN1-206ENST00000526966 PXDNLA1KZ92 1463 aa25.74■■□□□ 1.71
CAPN1-206ENST00000526966 MMP10P09238 476 aa25.74■■□□□ 1.71
CAPN1-206ENST00000526966 PLEKHO1Q53GL0 409 aaPredicted RBP25.74■■□□□ 1.71
CAPN1-206ENST00000526966 PCGF6Q9BYE7 350 aa25.74■■□□□ 1.71
CAPN1-206ENST00000526966 RTCBQ9Y3I0 505 aaKnown RBP25.74■■□□□ 1.71
CAPN1-206ENST00000526966 CNTNAP4Q9C0A0 1308 aa25.73■■□□□ 1.71
CAPN1-206ENST00000526966 AMOTQ4VCS5 1084 aa25.73■■□□□ 1.71
CAPN1-206ENST00000526966 RC3H1Q5TC82 1133 aaKnown RBP25.73■■□□□ 1.71
CAPN1-206ENST00000526966 GPBP1L1Q9HC44 474 aaPredicted RBP25.73■■□□□ 1.71
CAPN1-206ENST00000526966 BRCA1P38398 1863 aaKnown RBP25.72■■□□□ 1.71
CAPN1-206ENST00000526966 C10orf71Q711Q0 1435 aa25.72■■□□□ 1.71
CAPN1-206ENST00000526966 ADRA2BP18089 450 aa25.72■■□□□ 1.71
CAPN1-206ENST00000526966 ZNF530Q6P9A1 599 aaPredicted RBP25.72■■□□□ 1.71
CAPN1-206ENST00000526966 WWC3Q9ULE0 1092 aa25.72■■□□□ 1.71
CAPN1-206ENST00000526966 SCN11AQ9UI33 1791 aa25.72■■□□□ 1.71
CAPN1-206ENST00000526966 TRAPPC3LQ5T215 181 aa25.71■■□□□ 1.71
CAPN1-206ENST00000526966 RBM42Q9BTD8 480 aaKnown RBP25.71■■□□□ 1.71
CAPN1-206ENST00000526966 NLGN1Q8N2Q7 840 aa25.7■■□□□ 1.7
CAPN1-206ENST00000526966 TJP1Q07157 1748 aa25.69■■□□□ 1.7
CAPN1-206ENST00000526966 AEBP1Q8IUX7 1158 aa25.69■■□□□ 1.7
CAPN1-206ENST00000526966 ARHGEF1Q92888 912 aaKnown RBP25.69■■□□□ 1.7
CAPN1-206ENST00000526966 RPS6KA4O75676 772 aa25.68■■□□□ 1.7
CAPN1-206ENST00000526966 CABP4P57796 275 aa25.68■■□□□ 1.7
CAPN1-206ENST00000526966 MORC1Q86VD1 984 aa25.68■■□□□ 1.7
CAPN1-206ENST00000526966 VIRMAQ69YN4 1812 aaKnown RBP25.66■■□□□ 1.7
CAPN1-206ENST00000526966 GYS1P13807 737 aa25.66■■□□□ 1.7
CAPN1-206ENST00000526966 TGFB2P61812 414 aa25.66■■□□□ 1.7
CAPN1-206ENST00000526966 MTHFSP49914 203 aa25.65■■□□□ 1.7
CAPN1-206ENST00000526966 ZNF526Q8TF50 670 aaPredicted RBP25.65■■□□□ 1.7
CAPN1-206ENST00000526966 C1orf141Q5JVX7 400 aa25.64■■□□□ 1.7
CAPN1-206ENST00000526966 ARFGEF1Q9Y6D6 1849 aa25.64■■□□□ 1.7
CAPN1-206ENST00000526966 RFC4P35249 363 aa25.63■■□□□ 1.69
CAPN1-206ENST00000526966 SULT6B1Q6IMI4 303 aa25.63■■□□□ 1.69
CAPN1-206ENST00000526966 ADAMTS7Q9UKP4 1686 aa25.63■■□□□ 1.69
CAPN1-206ENST00000526966 IL13P35225 146 aa25.62■■□□□ 1.69
CAPN1-206ENST00000526966 PTCD1O75127 700 aaKnown RBP25.61■■□□□ 1.69
CAPN1-206ENST00000526966 NFATC2IPQ8NCF5 419 aa25.61■■□□□ 1.69
CAPN1-206ENST00000526966 CCDC87Q9NVE4 849 aa25.61■■□□□ 1.69
CAPN1-206ENST00000526966 KNSTRNQ9Y448 316 aa25.61■■□□□ 1.69
CAPN1-206ENST00000526966 A0A0G2JLW4 131 aa25.6■■□□□ 1.69
CAPN1-206ENST00000526966 CRKLP46109 303 aaKnown RBP25.6■■□□□ 1.69
CAPN1-206ENST00000526966 MRC1P22897 1456 aa25.6■■□□□ 1.69
CAPN1-206ENST00000526966 BCS1LQ9Y276 419 aa25.59■■□□□ 1.69
CAPN1-206ENST00000526966 PARP3Q9Y6F1 533 aa25.59■■□□□ 1.69
CAPN1-206ENST00000526966 KIF3CO14782 793 aa25.58■■□□□ 1.69
CAPN1-206ENST00000526966 HSPA6P17066 643 aa25.58■■□□□ 1.69
CAPN1-206ENST00000526966 AMER1Q5JTC6 1135 aaPredicted RBP25.58■■□□□ 1.69
CAPN1-206ENST00000526966 DPEP1P16444 411 aa25.57■■□□□ 1.68
CAPN1-206ENST00000526966 USP42Q9H9J4 1324 aaKnown RBP25.57■■□□□ 1.68
CAPN1-206ENST00000526966 AKAP4Q5JQC9 854 aa25.55■■□□□ 1.68
CAPN1-206ENST00000526966 KCNA3P22001 575 aa25.54■■□□□ 1.68
CAPN1-206ENST00000526966 SRP68Q9UHB9 627 aaKnown RBP25.54■■□□□ 1.68
CAPN1-206ENST00000526966 INTS5Q6P9B9 1019 aaKnown RBP25.53■■□□□ 1.68
CAPN1-206ENST00000526966 SLC52A2Q9HAB3 445 aa25.53■■□□□ 1.68
CAPN1-206ENST00000526966 FCHSD2O94868 740 aa25.52■■□□□ 1.68
CAPN1-206ENST00000526966 DDR1Q08345 913 aa25.52■■□□□ 1.68
CAPN1-206ENST00000526966 FKBP8Q14318 412 aa25.52■■□□□ 1.68
CAPN1-206ENST00000526966 KCPQ6ZWJ8 1503 aa25.52■■□□□ 1.68
CAPN1-206ENST00000526966 CCER1Q8TC90 406 aaPredicted RBP25.51■■□□□ 1.67
CAPN1-206ENST00000526966 UBR2Q8IWV8 1755 aa25.51■■□□□ 1.67
CAPN1-206ENST00000526966 AFDNP55196 1824 aaKnown RBP25.5■■□□□ 1.67
CAPN1-206ENST00000526966 KIF7Q2M1P5 1343 aa25.5■■□□□ 1.67
CAPN1-206ENST00000526966 ARHGAP27Q6ZUM4 889 aa25.5■■□□□ 1.67
CAPN1-206ENST00000526966 DNAJC10Q8IXB1 793 aa25.49■■□□□ 1.67
CAPN1-206ENST00000526966 LGR6Q9HBX8 967 aa25.49■■□□□ 1.67
CAPN1-206ENST00000526966 NRXN2Q9P2S2 1712 aa25.49■■□□□ 1.67
CAPN1-206ENST00000526966 SOS1Q07889 1333 aaPredicted RBP25.48■■□□□ 1.67
CAPN1-206ENST00000526966 SBF1O95248 1867 aa25.48■■□□□ 1.67
CAPN1-206ENST00000526966 RNMTO43148 476 aaKnown RBP25.47■■□□□ 1.67
CAPN1-206ENST00000526966 PIM2Q9P1W9 311 aa25.47■■□□□ 1.67
CAPN1-206ENST00000526966 POLRMTO00411 1230 aaKnown RBP25.46■■□□□ 1.67
CAPN1-206ENST00000526966 HMOX1P09601 288 aa25.46■■□□□ 1.67
CAPN1-206ENST00000526966 TM4SF1P30408 202 aa25.46■■□□□ 1.67
CAPN1-206ENST00000526966 PER1O15534 1290 aaPredicted RBP25.45■■□□□ 1.66
CAPN1-206ENST00000526966 CYP19A1P11511 503 aaPredicted RBP25.45■■□□□ 1.66
CAPN1-206ENST00000526966 DLEC1Q9Y238 1755 aa25.45■■□□□ 1.66
CAPN1-206ENST00000526966 TOMM70O94826 608 aa25.43■■□□□ 1.66
CAPN1-206ENST00000526966 SLC39A6Q13433 755 aa25.43■■□□□ 1.66
CAPN1-206ENST00000526966 MTHFSDQ2M296 383 aaKnown RBP25.43■■□□□ 1.66
CAPN1-206ENST00000526966 DALRD3Q5D0E6 543 aaKnown RBP25.43■■□□□ 1.66
CAPN1-206ENST00000526966 USPL1Q5W0Q7 1092 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms