RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 USP17L22D6RA61 530 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 USP17L17D6RBQ6 530 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 USP17L19D6RCP7 530 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 USP17L20D6RJB6 530 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 GNRH1P01148 92 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 USP17L24Q0WX57 530 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 CCDC102BQ68D86 513 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 AEBP1Q8IUX7 1158 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 FOXD4L4Q8WXT5 416 aaPredicted RBP7.79□□□□□ -1.16
CTR9-203ENST00000526874 CNKSR1Q969H4 720 aa7.79□□□□□ -1.16
CTR9-203ENST00000526874 TTLL8A6PVC2 850 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 ATP1A2P50993 1020 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 CLN3Q13286 438 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 PTK7Q13308 1070 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 LARP1Q6PKG0 1096 aaKnown RBP7.78□□□□□ -1.16
CTR9-203ENST00000526874 TRIM52Q96A61 297 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 NLRP3Q96P20 1036 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 ZNF358Q9NW07 568 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
CTR9-203ENST00000526874 SOS2Q07890 1332 aaPredicted RBP7.78□□□□□ -1.16
CTR9-203ENST00000526874 C11orf95C9JLR9 678 aaPredicted RBP7.77□□□□□ -1.17
CTR9-203ENST00000526874 EIF5BO60841 1220 aaKnown RBP7.77□□□□□ -1.17
CTR9-203ENST00000526874 INHAP05111 366 aa7.77□□□□□ -1.17
CTR9-203ENST00000526874 SRPK2P78362 688 aaKnown RBP7.77□□□□□ -1.17
CTR9-203ENST00000526874 DPYDQ12882 1025 aa7.77□□□□□ -1.17
CTR9-203ENST00000526874 RNF217Q8TC41 542 aa7.77□□□□□ -1.17
CTR9-203ENST00000526874 PBXIP1Q96AQ6 731 aa7.77□□□□□ -1.17
CTR9-203ENST00000526874 RHOQP17081 205 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 RBM25P49756 843 aaKnown RBP7.76□□□□□ -1.17
CTR9-203ENST00000526874 TLR1Q15399 786 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 PRICKLE2Q7Z3G6 844 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 GAS2L2Q8NHY3 880 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 TRIM47Q96LD4 638 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 ESYT1Q9BSJ8 1104 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 ZMIZ1Q9ULJ6 1067 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 USP3Q9Y6I4 520 aa7.76□□□□□ -1.17
CTR9-203ENST00000526874 FAM196BA6NMK8 535 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 MAN1A2O60476 641 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 DKK1O94907 266 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 CENPCQ03188 943 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 ESCO1Q5FWF5 840 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 SLC27A3Q5K4L6 730 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 TBCELQ5QJ74 424 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 TMCO4Q5TGY1 634 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 TNS4Q8IZW8 715 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 LARGE2Q8N3Y3 721 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 TSEN2Q8NCE0 465 aaKnown RBP7.75□□□□□ -1.17
CTR9-203ENST00000526874 STK32AQ8WU08 396 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 XAGE2Q96GT9 111 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 SENP2Q9HC62 589 aa7.75□□□□□ -1.17
CTR9-203ENST00000526874 NOVA2Q9UNW9 492 aaKnown RBP7.75□□□□□ -1.17
CTR9-203ENST00000526874 CARNS1A5YM72 827 aa7.74□□□□□ -1.17
CTR9-203ENST00000526874 MFAP1P55081 439 aaKnown RBP7.74□□□□□ -1.17
CTR9-203ENST00000526874 ZNF787Q6DD87 383 aa7.74□□□□□ -1.17
CTR9-203ENST00000526874 ANKMY2Q8IV38 441 aa7.74□□□□□ -1.17
CTR9-203ENST00000526874 SIX5Q8N196 739 aa7.74□□□□□ -1.17
CTR9-203ENST00000526874 FHDC1Q9C0D6 1143 aaPredicted RBP7.74□□□□□ -1.17
CTR9-203ENST00000526874 HRH3Q9Y5N1 445 aa7.74□□□□□ -1.17
CTR9-203ENST00000526874 PHKA2P46019 1235 aa7.73□□□□□ -1.17
CTR9-203ENST00000526874 RNF144AP50876 292 aaPredicted RBP7.73□□□□□ -1.17
CTR9-203ENST00000526874 KIFC2Q96AC6 838 aa7.73□□□□□ -1.17
CTR9-203ENST00000526874 ZSCAN10Q96SZ4 725 aaPredicted RBP7.73□□□□□ -1.17
CTR9-203ENST00000526874 GZF1Q9H116 711 aaPredicted RBP7.73□□□□□ -1.17
CTR9-203ENST00000526874 RBM19Q9Y4C8 960 aaKnown RBP7.73□□□□□ -1.17
CTR9-203ENST00000526874 POU4F2Q12837 409 aa7.72□□□□□ -1.17
CTR9-203ENST00000526874 WASLO00401 505 aaPredicted RBP7.71□□□□□ -1.18
CTR9-203ENST00000526874 SMTNP53814 917 aa7.71□□□□□ -1.18
CTR9-203ENST00000526874 SEC13P55735 322 aa7.71□□□□□ -1.18
CTR9-203ENST00000526874 TMEM214Q6NUQ4 689 aaKnown RBP7.71□□□□□ -1.18
CTR9-203ENST00000526874 LYSMD3Q7Z3D4 306 aa7.71□□□□□ -1.18
CTR9-203ENST00000526874 FAM200AQ8TCP9 573 aa7.71□□□□□ -1.18
CTR9-203ENST00000526874 GRIP2Q9C0E4 1043 aa7.71□□□□□ -1.18
CTR9-203ENST00000526874 A6NJY4 79 aa7.7□□□□□ -1.18
CTR9-203ENST00000526874 ATG7O95352 703 aa7.7□□□□□ -1.18
CTR9-203ENST00000526874 TMEM164Q5U3C3 297 aa7.7□□□□□ -1.18
CTR9-203ENST00000526874 HINFPQ9BQA5 517 aa7.7□□□□□ -1.18
CTR9-203ENST00000526874 TSPAN10Q9H1Z9 355 aaPredicted RBP7.7□□□□□ -1.18
CTR9-203ENST00000526874 PARP3Q9Y6F1 533 aa7.7□□□□□ -1.18
CTR9-203ENST00000526874 BACH1O14867 736 aa7.69□□□□□ -1.18
CTR9-203ENST00000526874 GPC1P35052 558 aa7.69□□□□□ -1.18
CTR9-203ENST00000526874 VEGFBP49765 207 aa7.69□□□□□ -1.18
CTR9-203ENST00000526874 EPHA4P54764 986 aa7.69□□□□□ -1.18
CTR9-203ENST00000526874 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.69□□□□□ -1.18
CTR9-203ENST00000526874 SLC9A9Q8IVB4 645 aa7.69□□□□□ -1.18
CTR9-203ENST00000526874 CDK11BP21127 795 aaKnown RBP7.68□□□□□ -1.18
CTR9-203ENST00000526874 PLA2G4AP47712 749 aa7.68□□□□□ -1.18
CTR9-203ENST00000526874 PTSQ03393 145 aa7.68□□□□□ -1.18
CTR9-203ENST00000526874 C4orf17Q53FE4 359 aa7.68□□□□□ -1.18
CTR9-203ENST00000526874 SH3PXD2AQ5TCZ1 1133 aa7.68□□□□□ -1.18
CTR9-203ENST00000526874 RETREG2Q8NC44 543 aa7.68□□□□□ -1.18
CTR9-203ENST00000526874 SLC4A9Q96Q91 983 aa7.68□□□□□ -1.18
CTR9-203ENST00000526874 CABP1Q9NZU7 370 aa7.68□□□□□ -1.18
CTR9-203ENST00000526874 SCHIP1Q9P0W5 487 aaPredicted RBP7.68□□□□□ -1.18
CTR9-203ENST00000526874 CDK11AQ9UQ88 783 aaPredicted RBP7.68□□□□□ -1.18
CTR9-203ENST00000526874 MTFR1Q15390 333 aa7.67□□□□□ -1.18
CTR9-203ENST00000526874 NBPF10Q6P3W6 841 aaKnown RBP7.67□□□□□ -1.18
CTR9-203ENST00000526874 TAS1R3Q7RTX0 852 aa7.67□□□□□ -1.18
CTR9-203ENST00000526874 NBPF15Q8N660 670 aa7.67□□□□□ -1.18
CTR9-203ENST00000526874 PRIMPOLQ96LW4 560 aa7.67□□□□□ -1.18
CTR9-203ENST00000526874 IQSEC3Q9UPP2 1182 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms