RNA–Protein interactions for RNA: ENST00000526866.5

CDC27-203, Transcript of cell division cycle 27, humanhuman

TSL 2

Gene CDC27, Length 1,420 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-203ENST00000526866 PCGF6Q9BYE7 350 aa25.47■■□□□ 1.67
CDC27-203ENST00000526866 PLEKHG2Q9H7P9 1386 aa25.47■■□□□ 1.67
CDC27-203ENST00000526866 KDRP35968 1356 aa25.45■■□□□ 1.67
CDC27-203ENST00000526866 PANK3Q9H999 370 aa25.45■■□□□ 1.66
CDC27-203ENST00000526866 ADCY9O60503 1353 aa25.44■■□□□ 1.66
CDC27-203ENST00000526866 SLC4A9Q96Q91 983 aa25.44■■□□□ 1.66
CDC27-203ENST00000526866 ERVV-2B6SEH9 535 aa25.43■■□□□ 1.66
CDC27-203ENST00000526866 HSPA5P11021 654 aaKnown RBP25.43■■□□□ 1.66
CDC27-203ENST00000526866 EIF4G2P78344 907 aaKnown RBP eCLIP25.43■■□□□ 1.66
CDC27-203ENST00000526866 ZNF831Q5JPB2 1677 aa25.42■■□□□ 1.66
CDC27-203ENST00000526866 RBM42Q9BTD8 480 aaKnown RBP25.42■■□□□ 1.66
CDC27-203ENST00000526866 MMP10P09238 476 aa25.41■■□□□ 1.66
CDC27-203ENST00000526866 DCAF5Q96JK2 942 aa25.41■■□□□ 1.66
CDC27-203ENST00000526866 GPBP1L1Q9HC44 474 aaPredicted RBP25.41■■□□□ 1.66
CDC27-203ENST00000526866 COL5A3P25940 1745 aaPredicted RBP25.41■■□□□ 1.66
CDC27-203ENST00000526866 KDM6AO15550 1401 aaPredicted RBP25.4■■□□□ 1.66
CDC27-203ENST00000526866 HSP90AB1P08238 724 aaKnown RBP25.4■■□□□ 1.66
CDC27-203ENST00000526866 PLEKHO1Q53GL0 409 aaPredicted RBP25.4■■□□□ 1.66
CDC27-203ENST00000526866 RTCBQ9Y3I0 505 aaKnown RBP25.4■■□□□ 1.66
CDC27-203ENST00000526866 TRAPPC3LQ5T215 181 aa25.39■■□□□ 1.66
CDC27-203ENST00000526866 ZNF530Q6P9A1 599 aaPredicted RBP25.39■■□□□ 1.66
CDC27-203ENST00000526866 ZNF526Q8TF50 670 aaPredicted RBP25.39■■□□□ 1.66
CDC27-203ENST00000526866 KIF13BQ9NQT8 1826 aa25.39■■□□□ 1.66
CDC27-203ENST00000526866 KIAA1551Q9HCM1 1747 aa25.38■■□□□ 1.65
CDC27-203ENST00000526866 CICQ96RK0 1608 aaPredicted RBP25.37■■□□□ 1.65
CDC27-203ENST00000526866 AMOTQ4VCS5 1084 aa25.37■■□□□ 1.65
CDC27-203ENST00000526866 AEBP1Q8IUX7 1158 aa25.37■■□□□ 1.65
CDC27-203ENST00000526866 N4BP2Q86UW6 1770 aaPredicted RBP25.36■■□□□ 1.65
CDC27-203ENST00000526866 PXDNLA1KZ92 1463 aa25.36■■□□□ 1.65
CDC27-203ENST00000526866 CABP4P57796 275 aa25.36■■□□□ 1.65
CDC27-203ENST00000526866 RC3H1Q5TC82 1133 aaKnown RBP25.36■■□□□ 1.65
CDC27-203ENST00000526866 ARHGEF1Q92888 912 aaKnown RBP25.36■■□□□ 1.65
CDC27-203ENST00000526866 MORC1Q86VD1 984 aa25.35■■□□□ 1.65
CDC27-203ENST00000526866 NLGN1Q8N2Q7 840 aa25.35■■□□□ 1.65
CDC27-203ENST00000526866 CNTNAP4Q9C0A0 1308 aa25.35■■□□□ 1.65
CDC27-203ENST00000526866 MYH14Q7Z406 1995 aaKnown RBP25.35■■□□□ 1.65
CDC27-203ENST00000526866 RPS6KA4O75676 772 aa25.33■■□□□ 1.65
CDC27-203ENST00000526866 ADRA2BP18089 450 aa25.33■■□□□ 1.65
CDC27-203ENST00000526866 C4AP0C0L4 1744 aa25.33■■□□□ 1.65
CDC27-203ENST00000526866 C10orf71Q711Q0 1435 aa25.32■■□□□ 1.64
CDC27-203ENST00000526866 GYS1P13807 737 aa25.32■■□□□ 1.64
CDC27-203ENST00000526866 MTHFSP49914 203 aa25.32■■□□□ 1.64
CDC27-203ENST00000526866 CEP350Q5VT06 3117 aa25.32■■□□□ 1.64
CDC27-203ENST00000526866 RFC4P35249 363 aa25.31■■□□□ 1.64
CDC27-203ENST00000526866 TGFB2P61812 414 aa25.31■■□□□ 1.64
CDC27-203ENST00000526866 C1orf141Q5JVX7 400 aa25.31■■□□□ 1.64
CDC27-203ENST00000526866 PTCD1O75127 700 aaKnown RBP25.3■■□□□ 1.64
CDC27-203ENST00000526866 SULT6B1Q6IMI4 303 aa25.3■■□□□ 1.64
CDC27-203ENST00000526866 A0A0G2JLW4 131 aa25.29■■□□□ 1.64
CDC27-203ENST00000526866 NFATC2IPQ8NCF5 419 aa25.29■■□□□ 1.64
CDC27-203ENST00000526866 CCDC87Q9NVE4 849 aa25.29■■□□□ 1.64
CDC27-203ENST00000526866 BCS1LQ9Y276 419 aa25.28■■□□□ 1.64
CDC27-203ENST00000526866 TJP1Q07157 1748 aa25.28■■□□□ 1.64
CDC27-203ENST00000526866 SCN11AQ9UI33 1791 aa25.27■■□□□ 1.64
CDC27-203ENST00000526866 IL13P35225 146 aa25.27■■□□□ 1.64
CDC27-203ENST00000526866 KNSTRNQ9Y448 316 aa25.27■■□□□ 1.64
CDC27-203ENST00000526866 PARP3Q9Y6F1 533 aa25.27■■□□□ 1.64
CDC27-203ENST00000526866 DPEP1P16444 411 aa25.26■■□□□ 1.63
CDC27-203ENST00000526866 CRKLP46109 303 aaKnown RBP25.26■■□□□ 1.63
CDC27-203ENST00000526866 BRCA1P38398 1863 aaKnown RBP25.26■■□□□ 1.63
CDC27-203ENST00000526866 KIF3CO14782 793 aa25.25■■□□□ 1.63
CDC27-203ENST00000526866 HSPA6P17066 643 aa25.24■■□□□ 1.63
CDC27-203ENST00000526866 SRP68Q9UHB9 627 aaKnown RBP25.24■■□□□ 1.63
CDC27-203ENST00000526866 FCHSD2O94868 740 aa25.21■■□□□ 1.63
CDC27-203ENST00000526866 ARHGAP27Q6ZUM4 889 aa25.21■■□□□ 1.63
CDC27-203ENST00000526866 USP42Q9H9J4 1324 aaKnown RBP25.21■■□□□ 1.63
CDC27-203ENST00000526866 FKBP8Q14318 412 aa25.2■■□□□ 1.63
CDC27-203ENST00000526866 AMER1Q5JTC6 1135 aaPredicted RBP25.2■■□□□ 1.63
CDC27-203ENST00000526866 CCER1Q8TC90 406 aaPredicted RBP25.2■■□□□ 1.63
CDC27-203ENST00000526866 KCNA3P22001 575 aa25.2■■□□□ 1.62
CDC27-203ENST00000526866 AKAP4Q5JQC9 854 aa25.2■■□□□ 1.62
CDC27-203ENST00000526866 ADAMTS7Q9UKP4 1686 aa25.19■■□□□ 1.62
CDC27-203ENST00000526866 INTS5Q6P9B9 1019 aaKnown RBP25.19■■□□□ 1.62
CDC27-203ENST00000526866 VIRMAQ69YN4 1812 aaKnown RBP25.18■■□□□ 1.62
CDC27-203ENST00000526866 ARFGEF1Q9Y6D6 1849 aa25.18■■□□□ 1.62
CDC27-203ENST00000526866 DDR1Q08345 913 aa25.18■■□□□ 1.62
CDC27-203ENST00000526866 LGR6Q9HBX8 967 aa25.18■■□□□ 1.62
CDC27-203ENST00000526866 DNAJC10Q8IXB1 793 aa25.17■■□□□ 1.62
CDC27-203ENST00000526866 SLC52A2Q9HAB3 445 aa25.17■■□□□ 1.62
CDC27-203ENST00000526866 HMOX1P09601 288 aa25.15■■□□□ 1.62
CDC27-203ENST00000526866 KIF7Q2M1P5 1343 aa25.15■■□□□ 1.62
CDC27-203ENST00000526866 MRC1P22897 1456 aa25.14■■□□□ 1.62
CDC27-203ENST00000526866 PIM2Q9P1W9 311 aa25.14■■□□□ 1.62
CDC27-203ENST00000526866 RNMTO43148 476 aaKnown RBP25.13■■□□□ 1.61
CDC27-203ENST00000526866 SLC39A6Q13433 755 aa25.13■■□□□ 1.61
CDC27-203ENST00000526866 TM4SF1P30408 202 aa25.12■■□□□ 1.61
CDC27-203ENST00000526866 POLRMTO00411 1230 aaKnown RBP25.12■■□□□ 1.61
CDC27-203ENST00000526866 USPL1Q5W0Q7 1092 aa25.12■■□□□ 1.61
CDC27-203ENST00000526866 SOS1Q07889 1333 aaPredicted RBP25.11■■□□□ 1.61
CDC27-203ENST00000526866 KCPQ6ZWJ8 1503 aa25.11■■□□□ 1.61
CDC27-203ENST00000526866 CYP19A1P11511 503 aaPredicted RBP25.11■■□□□ 1.61
CDC27-203ENST00000526866 CHRNA5P30532 468 aa25.11■■□□□ 1.61
CDC27-203ENST00000526866 MTHFSDQ2M296 383 aaKnown RBP25.11■■□□□ 1.61
CDC27-203ENST00000526866 DALRD3Q5D0E6 543 aaKnown RBP25.11■■□□□ 1.61
CDC27-203ENST00000526866 C9orf131Q5VYM1 1079 aa25.11■■□□□ 1.61
CDC27-203ENST00000526866 NMRK2Q9NPI5 230 aa25.11■■□□□ 1.61
CDC27-203ENST00000526866 ZPR1O75312 459 aa25.1■■□□□ 1.61
CDC27-203ENST00000526866 TOMM70O94826 608 aa25.1■■□□□ 1.61
CDC27-203ENST00000526866 IFFO2Q5TF58 517 aa25.1■■□□□ 1.61
CDC27-203ENST00000526866 PER1O15534 1290 aaPredicted RBP25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms