RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 PCDH11XQ9BZA7 1347 aa19.38■□□□□ 0.69
SSRP1-203ENST00000526696 PCDH11YQ9BZA8 1340 aa19.38■□□□□ 0.69
SSRP1-203ENST00000526696 AMPHP49418 695 aa19.37■□□□□ 0.69
SSRP1-203ENST00000526696 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
SSRP1-203ENST00000526696 RAPGEF4Q8WZA2 1011 aa19.37■□□□□ 0.69
SSRP1-203ENST00000526696 PCDH10Q9P2E7 1040 aa19.36■□□□□ 0.69
SSRP1-203ENST00000526696 TATP17735 454 aaPredicted RBP19.35■□□□□ 0.69
SSRP1-203ENST00000526696 CCDC87Q9NVE4 849 aa19.34■□□□□ 0.69
SSRP1-203ENST00000526696 FOXN1O15353 648 aa19.33■□□□□ 0.68
SSRP1-203ENST00000526696 TMF1P82094 1093 aa19.33■□□□□ 0.68
SSRP1-203ENST00000526696 NLGN1Q8N2Q7 840 aa19.33■□□□□ 0.68
SSRP1-203ENST00000526696 L3MBTL2Q969R5 705 aa19.33■□□□□ 0.68
SSRP1-203ENST00000526696 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
SSRP1-203ENST00000526696 RRS1Q15050 365 aaKnown RBP19.32■□□□□ 0.68
SSRP1-203ENST00000526696 PIM2Q9P1W9 311 aa19.32■□□□□ 0.68
SSRP1-203ENST00000526696 ASAP1Q9ULH1 1129 aa19.32■□□□□ 0.68
SSRP1-203ENST00000526696 GYS1P13807 737 aa19.31■□□□□ 0.68
SSRP1-203ENST00000526696 ATP6V1AP38606 617 aa19.31■□□□□ 0.68
SSRP1-203ENST00000526696 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
SSRP1-203ENST00000526696 RTL1A6NKG5 1358 aa19.31■□□□□ 0.68
SSRP1-203ENST00000526696 DALRD3Q5D0E6 543 aaKnown RBP19.3■□□□□ 0.68
SSRP1-203ENST00000526696 COG3Q96JB2 828 aa19.3■□□□□ 0.68
SSRP1-203ENST00000526696 KDM6AO15550 1401 aaPredicted RBP19.29■□□□□ 0.68
SSRP1-203ENST00000526696 NKX1-1Q15270 411 aaPredicted RBP19.29■□□□□ 0.68
SSRP1-203ENST00000526696 TRAPPC3LQ5T215 181 aa19.29■□□□□ 0.68
SSRP1-203ENST00000526696 ARHGEF1Q92888 912 aaKnown RBP19.29■□□□□ 0.68
SSRP1-203ENST00000526696 TERF2IPQ9NYB0 399 aa19.29■□□□□ 0.68
SSRP1-203ENST00000526696 POTECB2RU33 542 aa19.28■□□□□ 0.68
SSRP1-203ENST00000526696 VEGFAP15692 232 aaPredicted RBP19.28■□□□□ 0.68
SSRP1-203ENST00000526696 RASSF7Q02833 373 aa19.28■□□□□ 0.68
SSRP1-203ENST00000526696 PRDM10Q9NQV6 1147 aa19.28■□□□□ 0.68
SSRP1-203ENST00000526696 MKRN1Q9UHC7 482 aaKnown RBP19.28■□□□□ 0.68
SSRP1-203ENST00000526696 MYH14Q7Z406 1995 aaKnown RBP19.28■□□□□ 0.68
SSRP1-203ENST00000526696 SLC4A9Q96Q91 983 aa19.27■□□□□ 0.68
SSRP1-203ENST00000526696 PARP3Q9Y6F1 533 aa19.27■□□□□ 0.68
SSRP1-203ENST00000526696 CCDC88AQ3V6T2 1871 aa19.26■□□□□ 0.67
SSRP1-203ENST00000526696 GLTPD2A6NH11 291 aa19.26■□□□□ 0.67
SSRP1-203ENST00000526696 CHRNA5P30532 468 aa19.26■□□□□ 0.67
SSRP1-203ENST00000526696 RTCBQ9Y3I0 505 aaKnown RBP19.26■□□□□ 0.67
SSRP1-203ENST00000526696 KDRP35968 1356 aa19.26■□□□□ 0.67
SSRP1-203ENST00000526696 ZC3H4Q9UPT8 1303 aaKnown RBP19.25■□□□□ 0.67
SSRP1-203ENST00000526696 HSP90AB2PQ58FF8 381 aa19.25■□□□□ 0.67
SSRP1-203ENST00000526696 ATG3Q9NT62 314 aa19.25■□□□□ 0.67
SSRP1-203ENST00000526696 SMG6Q86US8 1419 aaKnown RBP19.24■□□□□ 0.67
SSRP1-203ENST00000526696 COL5A3P25940 1745 aaPredicted RBP19.23■□□□□ 0.67
SSRP1-203ENST00000526696 DDR1Q08345 913 aa19.23■□□□□ 0.67
SSRP1-203ENST00000526696 TMOD3Q9NYL9 352 aa19.23■□□□□ 0.67
SSRP1-203ENST00000526696 INSRP06213 1382 aa19.22■□□□□ 0.67
SSRP1-203ENST00000526696 CREBZFQ9NS37 354 aa19.22■□□□□ 0.67
SSRP1-203ENST00000526696 TIAM2Q8IVF5 1701 aa19.22■□□□□ 0.67
SSRP1-203ENST00000526696 ADRA2BP18089 450 aa19.21■□□□□ 0.67
SSRP1-203ENST00000526696 ABHD8Q96I13 439 aa19.21■□□□□ 0.67
SSRP1-203ENST00000526696 RFC4P35249 363 aa19.2■□□□□ 0.66
SSRP1-203ENST00000526696 ZNF831Q5JPB2 1677 aa19.2■□□□□ 0.66
SSRP1-203ENST00000526696 CNTNAP1P78357 1384 aa19.19■□□□□ 0.66
SSRP1-203ENST00000526696 NCAPD2Q15021 1401 aa19.19■□□□□ 0.66
SSRP1-203ENST00000526696 RPS6KA4O75676 772 aa19.19■□□□□ 0.66
SSRP1-203ENST00000526696 CTCFP49711 727 aaPredicted RBP19.19■□□□□ 0.66
SSRP1-203ENST00000526696 RC3H1Q5TC82 1133 aaKnown RBP19.19■□□□□ 0.66
SSRP1-203ENST00000526696 LMNB1P20700 586 aa19.18■□□□□ 0.66
SSRP1-203ENST00000526696 FKBP8Q14318 412 aa19.18■□□□□ 0.66
SSRP1-203ENST00000526696 SRP68Q9UHB9 627 aaKnown RBP19.18■□□□□ 0.66
SSRP1-203ENST00000526696 CNTNAP4Q9C0A0 1308 aa19.18■□□□□ 0.66
SSRP1-203ENST00000526696 VIRMAQ69YN4 1812 aaKnown RBP19.17■□□□□ 0.66
SSRP1-203ENST00000526696 POTEIP0CG38 1075 aa19.17■□□□□ 0.66
SSRP1-203ENST00000526696 POTEJP0CG39 1038 aa19.17■□□□□ 0.66
SSRP1-203ENST00000526696 LBX1P52954 281 aa19.17■□□□□ 0.66
SSRP1-203ENST00000526696 PDE4DIPQ5VU43 2346 aa19.17■□□□□ 0.66
SSRP1-203ENST00000526696 FYB1O15117 783 aa19.16■□□□□ 0.66
SSRP1-203ENST00000526696 PUS7Q96PZ0 661 aaKnown RBP19.16■□□□□ 0.66
SSRP1-203ENST00000526696 GGNBP2Q9H3C7 697 aa19.16■□□□□ 0.66
SSRP1-203ENST00000526696 FLT4P35916 1363 aa19.15■□□□□ 0.66
SSRP1-203ENST00000526696 NFKBIEO00221 500 aa19.14■□□□□ 0.65
SSRP1-203ENST00000526696 POLRMTO00411 1230 aaKnown RBP19.14■□□□□ 0.65
SSRP1-203ENST00000526696 PHKG2P15735 406 aa19.14■□□□□ 0.65
SSRP1-203ENST00000526696 VEGFBP49765 207 aa19.14■□□□□ 0.65
SSRP1-203ENST00000526696 RBM42Q9BTD8 480 aaKnown RBP19.14■□□□□ 0.65
SSRP1-203ENST00000526696 WBP1LQ9NX94 342 aa19.14■□□□□ 0.65
SSRP1-203ENST00000526696 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
SSRP1-203ENST00000526696 RGS19P49795 217 aa19.13■□□□□ 0.65
SSRP1-203ENST00000526696 MLLT1Q03111 559 aaPredicted RBP19.13■□□□□ 0.65
SSRP1-203ENST00000526696 CHADLQ6NUI6 762 aa19.13■□□□□ 0.65
SSRP1-203ENST00000526696 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
SSRP1-203ENST00000526696 AFDNP55196 1824 aaKnown RBP19.12■□□□□ 0.65
SSRP1-203ENST00000526696 DLEC1Q9Y238 1755 aa19.12■□□□□ 0.65
SSRP1-203ENST00000526696 ADAMTS7Q9UKP4 1686 aa19.12■□□□□ 0.65
SSRP1-203ENST00000526696 USP42Q9H9J4 1324 aaKnown RBP19.12■□□□□ 0.65
SSRP1-203ENST00000526696 HSPA8P11142 646 aaKnown RBP19.12■□□□□ 0.65
SSRP1-203ENST00000526696 AIDAQ96BJ3 306 aa19.12■□□□□ 0.65
SSRP1-203ENST00000526696 DICER1Q9UPY3 1922 aaKnown RBP19.12■□□□□ 0.65
SSRP1-203ENST00000526696 PASKQ96RG2 1323 aa19.11■□□□□ 0.65
SSRP1-203ENST00000526696 TM4SF1P30408 202 aa19.11■□□□□ 0.65
SSRP1-203ENST00000526696 IFNL2Q8IZJ0 200 aa19.1■□□□□ 0.65
SSRP1-203ENST00000526696 CARD11Q9BXL7 1154 aa19.1■□□□□ 0.65
SSRP1-203ENST00000526696 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■□□□□ 11.1
SSRP1-203ENST00000526696 KIF24Q5T7B8 1368 aa19.09■□□□□ 0.65
SSRP1-203ENST00000526696 TONSLQ96HA7 1378 aa19.09■□□□□ 0.65
SSRP1-203ENST00000526696 EMILIN1Q9Y6C2 1016 aa19.09■□□□□ 0.65
SSRP1-203ENST00000526696 CRKLP46109 303 aaKnown RBP19.07■□□□□ 0.64
SSRP1-203ENST00000526696 EYA1Q99502 592 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms