RNA–Protein interactions for RNA: ENST00000526181.1

USH1C-203, Transcript of USH1 protein network component harmonin, humanhuman

TSL 5

Gene USH1C, Length 1,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-203ENST00000526181 AKAP4Q5JQC9 854 aa18.1■□□□□ 0.49
USH1C-203ENST00000526181 SLC16A10Q8TF71 515 aa18.1■□□□□ 0.49
USH1C-203ENST00000526181 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
USH1C-203ENST00000526181 FHDC1Q9C0D6 1143 aaPredicted RBP18.1■□□□□ 0.49
USH1C-203ENST00000526181 NFATC2IPQ8NCF5 419 aa18.09■□□□□ 0.49
USH1C-203ENST00000526181 AK7Q96M32 723 aa18.09■□□□□ 0.49
USH1C-203ENST00000526181 ARXQ96QS3 562 aa18.09■□□□□ 0.49
USH1C-203ENST00000526181 LGR6Q9HBX8 967 aa18.09■□□□□ 0.49
USH1C-203ENST00000526181 COL24A1Q17RW2 1714 aa18.09■□□□□ 0.49
USH1C-203ENST00000526181 PHF14O94880 888 aa18.08■□□□□ 0.48
USH1C-203ENST00000526181 CFAP53Q96M91 514 aa18.08■□□□□ 0.48
USH1C-203ENST00000526181 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
USH1C-203ENST00000526181 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
USH1C-203ENST00000526181 MSL1Q68DK7 614 aa18.07■□□□□ 0.48
USH1C-203ENST00000526181 MRC1P22897 1456 aa18.07■□□□□ 0.48
USH1C-203ENST00000526181 SYT17Q9BSW7 474 aa18.06■□□□□ 0.48
USH1C-203ENST00000526181 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
USH1C-203ENST00000526181 RNMTO43148 476 aaKnown RBP18.05■□□□□ 0.48
USH1C-203ENST00000526181 PTCD1O75127 700 aaKnown RBP18.05■□□□□ 0.48
USH1C-203ENST00000526181 POLD1P28340 1107 aa18.05■□□□□ 0.48
USH1C-203ENST00000526181 SLC52A2Q9HAB3 445 aa18.05■□□□□ 0.48
USH1C-203ENST00000526181 ZNF831Q5JPB2 1677 aa18.05■□□□□ 0.48
USH1C-203ENST00000526181 UBR3Q6ZT12 1888 aa18.05■□□□□ 0.48
USH1C-203ENST00000526181 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.04■□□□□ 0.48
USH1C-203ENST00000526181 GNPATO15228 680 aa18.04■□□□□ 0.48
USH1C-203ENST00000526181 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
USH1C-203ENST00000526181 HMGB2P26583 209 aaKnown RBP18.03■□□□□ 0.48
USH1C-203ENST00000526181 PRKAR2BP31323 418 aa18.03■□□□□ 0.48
USH1C-203ENST00000526181 KLHL34Q8N239 644 aa18.03■□□□□ 0.48
USH1C-203ENST00000526181 FLAD1Q8NFF5 587 aa18.03■□□□□ 0.48
USH1C-203ENST00000526181 PHACTR3Q96KR7 559 aa18.03■□□□□ 0.48
USH1C-203ENST00000526181 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
USH1C-203ENST00000526181 TJP1Q07157 1748 aa18.02■□□□□ 0.48
USH1C-203ENST00000526181 MAP3K5Q99683 1374 aa18.02■□□□□ 0.47
USH1C-203ENST00000526181 U2AF1L5P0DN76 240 aaPredicted RBP18.01■□□□□ 0.47
USH1C-203ENST00000526181 SSFA2P28290 1259 aa18.01■□□□□ 0.47
USH1C-203ENST00000526181 U2AF1Q01081 240 aaKnown RBP eCLIP18.01■□□□□ 0.47
USH1C-203ENST00000526181 DDX10Q13206 875 aaKnown RBP18.01■□□□□ 0.47
USH1C-203ENST00000526181 SLC39A6Q13433 755 aa18.01■□□□□ 0.47
USH1C-203ENST00000526181 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
USH1C-203ENST00000526181 GAS2L2Q8NHY3 880 aa18■□□□□ 0.47
USH1C-203ENST00000526181 KCPQ6ZWJ8 1503 aa17.99■□□□□ 0.47
USH1C-203ENST00000526181 CICQ96RK0 1608 aaPredicted RBP17.99■□□□□ 0.47
USH1C-203ENST00000526181 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
USH1C-203ENST00000526181 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
USH1C-203ENST00000526181 GNAT3A8MTJ3 354 aa17.98■□□□□ 0.47
USH1C-203ENST00000526181 IL17REQ8NFR9 667 aa17.98■□□□□ 0.47
USH1C-203ENST00000526181 NLGN2Q8NFZ4 835 aa17.97■□□□□ 0.47
USH1C-203ENST00000526181 RTCBQ9Y3I0 505 aaKnown RBP17.97■□□□□ 0.47
USH1C-203ENST00000526181 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
USH1C-203ENST00000526181 RC3H1Q5TC82 1133 aaKnown RBP17.96■□□□□ 0.47
USH1C-203ENST00000526181 DNAJC10Q8IXB1 793 aa17.96■□□□□ 0.47
USH1C-203ENST00000526181 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
USH1C-203ENST00000526181 FCHSD2O94868 740 aa17.95■□□□□ 0.46
USH1C-203ENST00000526181 TRAPPC3LQ5T215 181 aa17.95■□□□□ 0.46
USH1C-203ENST00000526181 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
USH1C-203ENST00000526181 RPS6KA4O75676 772 aa17.94■□□□□ 0.46
USH1C-203ENST00000526181 UBR2Q8IWV8 1755 aa17.94■□□□□ 0.46
USH1C-203ENST00000526181 CEMIPQ8WUJ3 1361 aa17.93■□□□□ 0.46
USH1C-203ENST00000526181 C4AP0C0L4 1744 aa17.93■□□□□ 0.46
USH1C-203ENST00000526181 TEFQ10587 303 aa17.93■□□□□ 0.46
USH1C-203ENST00000526181 INTS5Q6P9B9 1019 aaKnown RBP17.93■□□□□ 0.46
USH1C-203ENST00000526181 SIPA1L3O60292 1781 aaPredicted RBP17.93■□□□□ 0.46
USH1C-203ENST00000526181 CYP19A1P11511 503 aaPredicted RBP17.91■□□□□ 0.46
USH1C-203ENST00000526181 ADRA2BP18089 450 aa17.91■□□□□ 0.46
USH1C-203ENST00000526181 RALBP1Q15311 655 aa17.91■□□□□ 0.46
USH1C-203ENST00000526181 MCM10Q7L590 875 aa17.91■□□□□ 0.46
USH1C-203ENST00000526181 MYH14Q7Z406 1995 aaKnown RBP17.91■□□□□ 0.46
USH1C-203ENST00000526181 GYS1P13807 737 aa17.9■□□□□ 0.46
USH1C-203ENST00000526181 RFC4P35249 363 aa17.9■□□□□ 0.46
USH1C-203ENST00000526181 DCTN1Q14203 1278 aa17.9■□□□□ 0.46
USH1C-203ENST00000526181 TTC5Q8N0Z6 440 aa17.9■□□□□ 0.46
USH1C-203ENST00000526181 ZNF496Q96IT1 587 aaPredicted RBP17.9■□□□□ 0.46
USH1C-203ENST00000526181 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
USH1C-203ENST00000526181 SRP68Q9UHB9 627 aaKnown RBP17.9■□□□□ 0.46
USH1C-203ENST00000526181 KCNQ3O43525 872 aa17.89■□□□□ 0.45
USH1C-203ENST00000526181 MMP10P09238 476 aa17.89■□□□□ 0.45
USH1C-203ENST00000526181 ZNF790Q6PG37 636 aa17.89■□□□□ 0.45
USH1C-203ENST00000526181 PELP1Q8IZL8 1130 aaKnown RBP17.89■□□□□ 0.45
USH1C-203ENST00000526181 PLEKHF1Q96S99 279 aa17.89■□□□□ 0.45
USH1C-203ENST00000526181 YY1P25490 414 aa17.88■□□□□ 0.45
USH1C-203ENST00000526181 GPR162Q16538 588 aa17.88■□□□□ 0.45
USH1C-203ENST00000526181 VSIG10Q8N0Z9 540 aa17.88■□□□□ 0.45
USH1C-203ENST00000526181 ZBTB1Q9Y2K1 713 aa17.88■□□□□ 0.45
USH1C-203ENST00000526181 CD2APQ9Y5K6 639 aa17.88■□□□□ 0.45
USH1C-203ENST00000526181 BTBD11A6QL63 1104 aa17.87■□□□□ 0.45
USH1C-203ENST00000526181 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
USH1C-203ENST00000526181 SOS1Q07889 1333 aaPredicted RBP17.87■□□□□ 0.45
USH1C-203ENST00000526181 MYBBP1AQ9BQG0 1328 aaKnown RBP17.87■□□□□ 0.45
USH1C-203ENST00000526181 USP42Q9H9J4 1324 aaKnown RBP17.87■□□□□ 0.45
USH1C-203ENST00000526181 HEG1Q9ULI3 1381 aa17.87■□□□□ 0.45
USH1C-203ENST00000526181 NLGN1Q8N2Q7 840 aa17.86■□□□□ 0.45
USH1C-203ENST00000526181 YBX3P16989 372 aaKnown RBP eCLIP17.85■□□□□ 0.45
USH1C-203ENST00000526181 COL15A1P39059 1388 aa17.84■□□□□ 0.45
USH1C-203ENST00000526181 CANXP27824 592 aaKnown RBP17.84■□□□□ 0.45
USH1C-203ENST00000526181 ZEB1P37275 1124 aaPredicted RBP17.84■□□□□ 0.45
USH1C-203ENST00000526181 FKBP8Q14318 412 aa17.84■□□□□ 0.45
USH1C-203ENST00000526181 WWC3Q9ULE0 1092 aa17.84■□□□□ 0.45
USH1C-203ENST00000526181 HTATSF1O43719 755 aaKnown RBP17.83■□□□□ 0.44
USH1C-203ENST00000526181 USPL1Q5W0Q7 1092 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms