RNA–Protein interactions for RNA: ENST00000526150.1

COLCA1-202, Transcript of colorectal cancer associated 1, humanhuman

TSL 2

Gene COLCA1, Length 391 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-202ENST00000526150 PANK3Q9H999 370 aa16.69■□□□□ 0.26
COLCA1-202ENST00000526150 ATG3Q9NT62 314 aa16.69■□□□□ 0.26
COLCA1-202ENST00000526150 RTCBQ9Y3I0 505 aaKnown RBP16.69■□□□□ 0.26
COLCA1-202ENST00000526150 IGSF1Q8N6C5 1336 aa16.69■□□□□ 0.26
COLCA1-202ENST00000526150 TRAPPC3LQ5T215 181 aa16.68■□□□□ 0.26
COLCA1-202ENST00000526150 HSPA5P11021 654 aaKnown RBP16.67■□□□□ 0.26
COLCA1-202ENST00000526150 RC3H1Q5TC82 1133 aaKnown RBP16.67■□□□□ 0.26
COLCA1-202ENST00000526150 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
COLCA1-202ENST00000526150 NLGN1Q8N2Q7 840 aa16.67■□□□□ 0.26
COLCA1-202ENST00000526150 ADRA2BP18089 450 aa16.66■□□□□ 0.26
COLCA1-202ENST00000526150 ITPK1Q13572 414 aa16.66■□□□□ 0.26
COLCA1-202ENST00000526150 C1orf141Q5JVX7 400 aa16.66■□□□□ 0.26
COLCA1-202ENST00000526150 RBM42Q9BTD8 480 aaKnown RBP16.66■□□□□ 0.26
COLCA1-202ENST00000526150 GPBP1L1Q9HC44 474 aaPredicted RBP16.66■□□□□ 0.26
COLCA1-202ENST00000526150 KNSTRNQ9Y448 316 aa16.66■□□□□ 0.26
COLCA1-202ENST00000526150 CABP4P57796 275 aa16.65■□□□□ 0.26
COLCA1-202ENST00000526150 ZNF530Q6P9A1 599 aaPredicted RBP16.65■□□□□ 0.26
COLCA1-202ENST00000526150 AMIGO3Q86WK7 504 aa16.65■□□□□ 0.26
COLCA1-202ENST00000526150 ATP10DQ9P241 1426 aa16.63■□□□□ 0.25
COLCA1-202ENST00000526150 ZNF831Q5JPB2 1677 aa16.63■□□□□ 0.25
COLCA1-202ENST00000526150 MMP10P09238 476 aa16.63■□□□□ 0.25
COLCA1-202ENST00000526150 MTHFSP49914 203 aa16.63■□□□□ 0.25
COLCA1-202ENST00000526150 TGFB2P61812 414 aa16.63■□□□□ 0.25
COLCA1-202ENST00000526150 GOLGB1Q14789 3259 aaKnown RBP16.62■□□□□ 0.25
COLCA1-202ENST00000526150 RPS6KA4O75676 772 aa16.62■□□□□ 0.25
COLCA1-202ENST00000526150 RFC4P35249 363 aa16.62■□□□□ 0.25
COLCA1-202ENST00000526150 SMIM5Q71RC9 77 aa16.62■□□□□ 0.25
COLCA1-202ENST00000526150 CNTNAP4Q9C0A0 1308 aa16.62■□□□□ 0.25
COLCA1-202ENST00000526150 KDRP35968 1356 aa16.62■□□□□ 0.25
COLCA1-202ENST00000526150 CCER1Q8TC90 406 aaPredicted RBP16.61■□□□□ 0.25
COLCA1-202ENST00000526150 CCDC87Q9NVE4 849 aa16.61■□□□□ 0.25
COLCA1-202ENST00000526150 ARHGEF1Q92888 912 aaKnown RBP16.6■□□□□ 0.25
COLCA1-202ENST00000526150 PARP3Q9Y6F1 533 aa16.6■□□□□ 0.25
COLCA1-202ENST00000526150 SULT6B1Q6IMI4 303 aa16.59■□□□□ 0.25
COLCA1-202ENST00000526150 ADCY9O60503 1353 aa16.59■□□□□ 0.25
COLCA1-202ENST00000526150 SLC4A9Q96Q91 983 aa16.58■□□□□ 0.24
COLCA1-202ENST00000526150 PTCD1O75127 700 aaKnown RBP16.57■□□□□ 0.24
COLCA1-202ENST00000526150 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
COLCA1-202ENST00000526150 WWC3Q9ULE0 1092 aa16.57■□□□□ 0.24
COLCA1-202ENST00000526150 KDM6AO15550 1401 aaPredicted RBP16.56■□□□□ 0.24
COLCA1-202ENST00000526150 GYS1P13807 737 aa16.56■□□□□ 0.24
COLCA1-202ENST00000526150 AKAP4Q5JQC9 854 aa16.56■□□□□ 0.24
COLCA1-202ENST00000526150 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
COLCA1-202ENST00000526150 BCS1LQ9Y276 419 aa16.56■□□□□ 0.24
COLCA1-202ENST00000526150 KIF13BQ9NQT8 1826 aa16.55■□□□□ 0.24
COLCA1-202ENST00000526150 IL13P35225 146 aa16.55■□□□□ 0.24
COLCA1-202ENST00000526150 AEBP1Q8IUX7 1158 aa16.55■□□□□ 0.24
COLCA1-202ENST00000526150 COL5A3P25940 1745 aaPredicted RBP16.55■□□□□ 0.24
COLCA1-202ENST00000526150 CRKLP46109 303 aaKnown RBP16.54■□□□□ 0.24
COLCA1-202ENST00000526150 CICQ96RK0 1608 aaPredicted RBP16.54■□□□□ 0.24
COLCA1-202ENST00000526150 PXDNLA1KZ92 1463 aa16.54■□□□□ 0.24
COLCA1-202ENST00000526150 C10orf71Q711Q0 1435 aa16.53■□□□□ 0.24
COLCA1-202ENST00000526150 A0A0G2JLW4 131 aa16.53■□□□□ 0.24
COLCA1-202ENST00000526150 FCHSD2O94868 740 aa16.52■□□□□ 0.24
COLCA1-202ENST00000526150 HSPA6P17066 643 aa16.52■□□□□ 0.24
COLCA1-202ENST00000526150 ARHGAP27Q6ZUM4 889 aa16.52■□□□□ 0.24
COLCA1-202ENST00000526150 SLC52A2Q9HAB3 445 aa16.52■□□□□ 0.24
COLCA1-202ENST00000526150 C4AP0C0L4 1744 aa16.52■□□□□ 0.24
COLCA1-202ENST00000526150 MYH14Q7Z406 1995 aaKnown RBP16.51■□□□□ 0.23
COLCA1-202ENST00000526150 ZPR1O75312 459 aa16.51■□□□□ 0.23
COLCA1-202ENST00000526150 DPEP1P16444 411 aa16.51■□□□□ 0.23
COLCA1-202ENST00000526150 AMER1Q5JTC6 1135 aaPredicted RBP16.51■□□□□ 0.23
COLCA1-202ENST00000526150 PIM2Q9P1W9 311 aa16.51■□□□□ 0.23
COLCA1-202ENST00000526150 SCN11AQ9UI33 1791 aa16.51■□□□□ 0.23
COLCA1-202ENST00000526150 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
COLCA1-202ENST00000526150 N4BP2Q86UW6 1770 aaPredicted RBP16.5■□□□□ 0.23
COLCA1-202ENST00000526150 DIAPH1O60610 1272 aaKnown RBP16.49■□□□□ 0.23
COLCA1-202ENST00000526150 RNMTO43148 476 aaKnown RBP16.48■□□□□ 0.23
COLCA1-202ENST00000526150 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
COLCA1-202ENST00000526150 KIF3CO14782 793 aa16.47■□□□□ 0.23
COLCA1-202ENST00000526150 DALRD3Q5D0E6 543 aaKnown RBP16.47■□□□□ 0.23
COLCA1-202ENST00000526150 VSIG10Q8N0Z9 540 aa16.47■□□□□ 0.23
COLCA1-202ENST00000526150 KIAA1551Q9HCM1 1747 aa16.47■□□□□ 0.23
COLCA1-202ENST00000526150 TOMM70O94826 608 aa16.46■□□□□ 0.23
COLCA1-202ENST00000526150 HMOX1P09601 288 aa16.46■□□□□ 0.23
COLCA1-202ENST00000526150 FKBP8Q14318 412 aa16.46■□□□□ 0.23
COLCA1-202ENST00000526150 INTS5Q6P9B9 1019 aaKnown RBP16.46■□□□□ 0.23
COLCA1-202ENST00000526150 DNAJC10Q8IXB1 793 aa16.46■□□□□ 0.23
COLCA1-202ENST00000526150 LGR6Q9HBX8 967 aa16.46■□□□□ 0.23
COLCA1-202ENST00000526150 SRP68Q9UHB9 627 aaKnown RBP16.46■□□□□ 0.23
COLCA1-202ENST00000526150 KCNA3P22001 575 aa16.45■□□□□ 0.22
COLCA1-202ENST00000526150 ARFGEF1Q9Y6D6 1849 aa16.45■□□□□ 0.22
COLCA1-202ENST00000526150 TJP1Q07157 1748 aa16.45■□□□□ 0.22
COLCA1-202ENST00000526150 CYP19A1P11511 503 aaPredicted RBP16.44■□□□□ 0.22
COLCA1-202ENST00000526150 TM4SF1P30408 202 aa16.44■□□□□ 0.22
COLCA1-202ENST00000526150 C16orf71Q8IYS4 520 aaPredicted RBP16.44■□□□□ 0.22
COLCA1-202ENST00000526150 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
COLCA1-202ENST00000526150 NARFQ9UHQ1 456 aa16.44■□□□□ 0.22
COLCA1-202ENST00000526150 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
COLCA1-202ENST00000526150 SOS1Q07889 1333 aaPredicted RBP16.44■□□□□ 0.22
COLCA1-202ENST00000526150 MRC1P22897 1456 aa16.43■□□□□ 0.22
COLCA1-202ENST00000526150 POLRMTO00411 1230 aaKnown RBP16.43■□□□□ 0.22
COLCA1-202ENST00000526150 PER1O15534 1290 aaPredicted RBP16.43■□□□□ 0.22
COLCA1-202ENST00000526150 STARD3NLO95772 234 aa16.43■□□□□ 0.22
COLCA1-202ENST00000526150 APLP1P51693 650 aa16.43■□□□□ 0.22
COLCA1-202ENST00000526150 DDR1Q08345 913 aa16.43■□□□□ 0.22
COLCA1-202ENST00000526150 MTHFSDQ2M296 383 aaKnown RBP16.43■□□□□ 0.22
COLCA1-202ENST00000526150 CC2D1BQ5T0F9 858 aaKnown RBP16.43■□□□□ 0.22
COLCA1-202ENST00000526150 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
COLCA1-202ENST00000526150 USPL1Q5W0Q7 1092 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms