RNA–Protein interactions for RNA: ENST00000525947.1

ROM1-203, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene ROM1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-203ENST00000525947 PHF14O94880 888 aa33.29■■■□□ 2.92
ROM1-203ENST00000525947 HMGB2P26583 209 aaKnown RBP33.29■■■□□ 2.92
ROM1-203ENST00000525947 AMOTQ4VCS5 1084 aa33.29■■■□□ 2.92
ROM1-203ENST00000525947 KDM6AO15550 1401 aaPredicted RBP33.28■■■□□ 2.92
ROM1-203ENST00000525947 HSP90AB1P08238 724 aaKnown RBP33.28■■■□□ 2.92
ROM1-203ENST00000525947 ATP6V1AP38606 617 aa33.28■■■□□ 2.92
ROM1-203ENST00000525947 ITPK1Q13572 414 aa33.27■■■□□ 2.92
ROM1-203ENST00000525947 FLAD1Q8NFF5 587 aa33.27■■■□□ 2.92
ROM1-203ENST00000525947 DCAF5Q96JK2 942 aa33.27■■■□□ 2.92
ROM1-203ENST00000525947 ZNF831Q5JPB2 1677 aa33.26■■■□□ 2.92
ROM1-203ENST00000525947 ERVV-2B6SEH9 535 aa33.26■■■□□ 2.91
ROM1-203ENST00000525947 C1orf141Q5JVX7 400 aa33.26■■■□□ 2.91
ROM1-203ENST00000525947 MYH14Q7Z406 1995 aaKnown RBP33.26■■■□□ 2.91
ROM1-203ENST00000525947 KDRP35968 1356 aa33.24■■■□□ 2.91
ROM1-203ENST00000525947 NLGN2Q8NFZ4 835 aa33.23■■■□□ 2.91
ROM1-203ENST00000525947 RBM42Q9BTD8 480 aaKnown RBP33.23■■■□□ 2.91
ROM1-203ENST00000525947 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.22■■■□□ 2.91
ROM1-203ENST00000525947 HMOX1P09601 288 aa33.22■■■□□ 2.91
ROM1-203ENST00000525947 CABP4P57796 275 aa33.22■■■□□ 2.91
ROM1-203ENST00000525947 PELP1Q8IZL8 1130 aaKnown RBP33.22■■■□□ 2.91
ROM1-203ENST00000525947 GPR162Q16538 588 aa33.21■■■□□ 2.91
ROM1-203ENST00000525947 GNPATO15228 680 aa33.19■■■□□ 2.9
ROM1-203ENST00000525947 SLC4A9Q96Q91 983 aa33.18■■■□□ 2.9
ROM1-203ENST00000525947 DIAPH1O60610 1272 aaKnown RBP33.16■■■□□ 2.9
ROM1-203ENST00000525947 SSFA2P28290 1259 aa33.16■■■□□ 2.9
ROM1-203ENST00000525947 NFATC2IPQ8NCF5 419 aa33.16■■■□□ 2.9
ROM1-203ENST00000525947 TJP1Q07157 1748 aa33.16■■■□□ 2.9
ROM1-203ENST00000525947 C4AP0C0L4 1744 aa33.15■■■□□ 2.9
ROM1-203ENST00000525947 NPC1L1Q9UHC9 1359 aa33.12■■■□□ 2.89
ROM1-203ENST00000525947 PTCD1O75127 700 aaKnown RBP33.11■■■□□ 2.89
ROM1-203ENST00000525947 AKAP4Q5JQC9 854 aa33.11■■■□□ 2.89
ROM1-203ENST00000525947 COL3A1P02461 1466 aaPredicted RBP33.11■■■□□ 2.89
ROM1-203ENST00000525947 LGR6Q9HBX8 967 aa33.09■■■□□ 2.89
ROM1-203ENST00000525947 RTCBQ9Y3I0 505 aaKnown RBP33.07■■■□□ 2.88
ROM1-203ENST00000525947 U2SURPO15042 1029 aaKnown RBP33.06■■■□□ 2.88
ROM1-203ENST00000525947 MTHFSDQ2M296 383 aaKnown RBP33.06■■■□□ 2.88
ROM1-203ENST00000525947 ADAMTS7Q9UKP4 1686 aa33.06■■■□□ 2.88
ROM1-203ENST00000525947 N4BP2Q86UW6 1770 aaPredicted RBP33.06■■■□□ 2.88
ROM1-203ENST00000525947 UTRNP46939 3433 aa33.05■■■□□ 2.88
ROM1-203ENST00000525947 CICQ96RK0 1608 aaPredicted RBP33.04■■■□□ 2.88
ROM1-203ENST00000525947 TRAPPC3LQ5T215 181 aa33.04■■■□□ 2.88
ROM1-203ENST00000525947 CD2APQ9Y5K6 639 aa33.04■■■□□ 2.88
ROM1-203ENST00000525947 KIF13BQ9NQT8 1826 aa33.03■■■□□ 2.88
ROM1-203ENST00000525947 RNMTO43148 476 aaKnown RBP33.03■■■□□ 2.88
ROM1-203ENST00000525947 YBX3P16989 372 aaKnown RBP eCLIP33.03■■■□□ 2.88
ROM1-203ENST00000525947 CNTNAP4Q9C0A0 1308 aa33.02■■■□□ 2.88
ROM1-203ENST00000525947 RC3H1Q5TC82 1133 aaKnown RBP33.02■■■□□ 2.88
ROM1-203ENST00000525947 SLC52A2Q9HAB3 445 aa33.02■■■□□ 2.88
ROM1-203ENST00000525947 SIPA1L3O60292 1781 aaPredicted RBP33.01■■■□□ 2.87
ROM1-203ENST00000525947 ZNF784Q8NCA9 323 aaPredicted RBP33■■■□□ 2.87
ROM1-203ENST00000525947 ARHGEF1Q92888 912 aaKnown RBP33■■■□□ 2.87
ROM1-203ENST00000525947 UBR2Q8IWV8 1755 aa33■■■□□ 2.87
ROM1-203ENST00000525947 MRC1P22897 1456 aa32.99■■■□□ 2.87
ROM1-203ENST00000525947 GOLGB1Q14789 3259 aaKnown RBP32.99■■■□□ 2.87
ROM1-203ENST00000525947 RPS6KA4O75676 772 aa32.99■■■□□ 2.87
ROM1-203ENST00000525947 SLC39A6Q13433 755 aa32.99■■■□□ 2.87
ROM1-203ENST00000525947 WWC3Q9ULE0 1092 aa32.98■■■□□ 2.87
ROM1-203ENST00000525947 MMP10P09238 476 aa32.97■■■□□ 2.87
ROM1-203ENST00000525947 CRKLP46109 303 aaKnown RBP32.97■■■□□ 2.87
ROM1-203ENST00000525947 KIAA1551Q9HCM1 1747 aa32.97■■■□□ 2.87
ROM1-203ENST00000525947 RFC4P35249 363 aa32.96■■■□□ 2.87
ROM1-203ENST00000525947 ADRA2BP18089 450 aa32.93■■■□□ 2.86
ROM1-203ENST00000525947 DNAJC10Q8IXB1 793 aa32.93■■■□□ 2.86
ROM1-203ENST00000525947 CFAP53Q96M91 514 aa32.93■■■□□ 2.86
ROM1-203ENST00000525947 KCPQ6ZWJ8 1503 aa32.92■■■□□ 2.86
ROM1-203ENST00000525947 GRIN3BO60391 1043 aa32.92■■■□□ 2.86
ROM1-203ENST00000525947 NLGN1Q8N2Q7 840 aa32.91■■■□□ 2.86
ROM1-203ENST00000525947 GYS1P13807 737 aa32.9■■■□□ 2.86
ROM1-203ENST00000525947 PPP2R1AP30153 589 aa32.9■■■□□ 2.86
ROM1-203ENST00000525947 BRCA1P38398 1863 aaKnown RBP32.9■■■□□ 2.86
ROM1-203ENST00000525947 DLG5Q8TDM6 1919 aa32.89■■■□□ 2.85
ROM1-203ENST00000525947 INTS5Q6P9B9 1019 aaKnown RBP32.88■■■□□ 2.85
ROM1-203ENST00000525947 SRP68Q9UHB9 627 aaKnown RBP32.88■■■□□ 2.85
ROM1-203ENST00000525947 AFDNP55196 1824 aaKnown RBP32.87■■■□□ 2.85
ROM1-203ENST00000525947 GAS2L2Q8NHY3 880 aa32.87■■■□□ 2.85
ROM1-203ENST00000525947 GNAT3A8MTJ3 354 aa32.85■■■□□ 2.85
ROM1-203ENST00000525947 PRKAR2BP31323 418 aa32.85■■■□□ 2.85
ROM1-203ENST00000525947 PHACTR3Q96KR7 559 aa32.85■■■□□ 2.85
ROM1-203ENST00000525947 CCDC87Q9NVE4 849 aa32.85■■■□□ 2.85
ROM1-203ENST00000525947 IL17REQ8NFR9 667 aa32.84■■■□□ 2.85
ROM1-203ENST00000525947 RSPH6AQ9H0K4 717 aa32.83■■■□□ 2.85
ROM1-203ENST00000525947 NUDCQ9Y266 331 aa32.83■■■□□ 2.85
ROM1-203ENST00000525947 PARP3Q9Y6F1 533 aa32.83■■■□□ 2.85
ROM1-203ENST00000525947 CYP19A1P11511 503 aaPredicted RBP32.82■■■□□ 2.84
ROM1-203ENST00000525947 TEFQ10587 303 aa32.82■■■□□ 2.84
ROM1-203ENST00000525947 USP42Q9H9J4 1324 aaKnown RBP32.81■■■□□ 2.84
ROM1-203ENST00000525947 U2AF1L5P0DN76 240 aaPredicted RBP32.81■■■□□ 2.84
ROM1-203ENST00000525947 U2AF1Q01081 240 aaKnown RBP eCLIP32.81■■■□□ 2.84
ROM1-203ENST00000525947 PXDNLA1KZ92 1463 aa32.8■■■□□ 2.84
ROM1-203ENST00000525947 FKBP8Q14318 412 aa32.8■■■□□ 2.84
ROM1-203ENST00000525947 TTC5Q8N0Z6 440 aa32.8■■■□□ 2.84
ROM1-203ENST00000525947 C10orf71Q711Q0 1435 aa32.79■■■□□ 2.84
ROM1-203ENST00000525947 SOS1Q07889 1333 aaPredicted RBP32.78■■■□□ 2.84
ROM1-203ENST00000525947 A0A0G2JLW4 131 aa32.78■■■□□ 2.84
ROM1-203ENST00000525947 ARFGEF1Q9Y6D6 1849 aa32.78■■■□□ 2.84
ROM1-203ENST00000525947 ZBTB1Q9Y2K1 713 aa32.77■■■□□ 2.84
ROM1-203ENST00000525947 USPL1Q5W0Q7 1092 aa32.76■■■□□ 2.83
ROM1-203ENST00000525947 ZPR1O75312 459 aa32.75■■■□□ 2.83
ROM1-203ENST00000525947 VSIG10Q8N0Z9 540 aa32.75■■■□□ 2.83
ROM1-203ENST00000525947 DDR1Q08345 913 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms