RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 C4orf17Q53FE4 359 aa11.3□□□□□ -0.6
COPB1-203ENST00000525214 PLEKHM2Q8IWE5 1019 aa11.3□□□□□ -0.6
COPB1-203ENST00000525214 ZNF837Q96EG3 531 aaPredicted RBP11.3□□□□□ -0.6
COPB1-203ENST00000525214 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
COPB1-203ENST00000525214 USP17L3A6NCW0 530 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 USP17L4A6NCW7 530 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 ATP9BO43861 1147 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 PHKA2P46019 1235 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 GTF2IP78347 998 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 DBN1Q16643 649 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 USP17L1Q7RTZ2 530 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
COPB1-203ENST00000525214 TIMMDC1Q9NPL8 285 aa11.29□□□□□ -0.6
COPB1-203ENST00000525214 TMEM214Q6NUQ4 689 aaKnown RBP11.28□□□□□ -0.6
COPB1-203ENST00000525214 TRIM22Q8IYM9 498 aa11.28□□□□□ -0.6
COPB1-203ENST00000525214 ZSCAN1Q8NBB4 408 aa11.28□□□□□ -0.6
COPB1-203ENST00000525214 CNTNAP3BQ96NU0 1288 aa11.28□□□□□ -0.6
COPB1-203ENST00000525214 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
COPB1-203ENST00000525214 CNTNAP3Q9BZ76 1288 aa11.28□□□□□ -0.6
COPB1-203ENST00000525214 GNASQ5JWF2 1037 aa11.27□□□□□ -0.61
COPB1-203ENST00000525214 RIPOR1Q6ZS17 1223 aa11.27□□□□□ -0.61
COPB1-203ENST00000525214 RHBDD1Q8TEB9 315 aa11.27□□□□□ -0.61
COPB1-203ENST00000525214 SLC4A9Q96Q91 983 aa11.27□□□□□ -0.61
COPB1-203ENST00000525214 SERTAD1Q9UHV2 236 aa11.27□□□□□ -0.61
COPB1-203ENST00000525214 SMTNP53814 917 aa11.26□□□□□ -0.61
COPB1-203ENST00000525214 STK17AQ9UEE5 414 aa11.26□□□□□ -0.61
COPB1-203ENST00000525214 THBS1P07996 1170 aa11.25□□□□□ -0.61
COPB1-203ENST00000525214 GAS6Q14393 721 aa11.25□□□□□ -0.61
COPB1-203ENST00000525214 ZNF295-AS1Q8N0V1 137 aa11.25□□□□□ -0.61
COPB1-203ENST00000525214 KIAA1024Q9UPX6 916 aa11.25□□□□□ -0.61
COPB1-203ENST00000525214 USP3Q9Y6I4 520 aa11.25□□□□□ -0.61
COPB1-203ENST00000525214 F11P03951 625 aa11.24□□□□□ -0.61
COPB1-203ENST00000525214 CLDN10P78369 228 aa11.24□□□□□ -0.61
COPB1-203ENST00000525214 MTFR1Q15390 333 aa11.24□□□□□ -0.61
COPB1-203ENST00000525214 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
COPB1-203ENST00000525214 ZNF358Q9NW07 568 aa11.24□□□□□ -0.61
COPB1-203ENST00000525214 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
COPB1-203ENST00000525214 A0A1B0GTH6 734 aa11.23□□□□□ -0.61
COPB1-203ENST00000525214 ZBTB7BO15156 539 aaPredicted RBP11.23□□□□□ -0.61
COPB1-203ENST00000525214 GTF2E1P29083 439 aaPredicted RBP11.23□□□□□ -0.61
COPB1-203ENST00000525214 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.23□□□□□ -0.61
COPB1-203ENST00000525214 GPAMQ9HCL2 828 aa11.23□□□□□ -0.61
COPB1-203ENST00000525214 TFIP11Q9UBB9 837 aaKnown RBP11.23□□□□□ -0.61
COPB1-203ENST00000525214 A6NJY4 79 aa11.22□□□□□ -0.61
COPB1-203ENST00000525214 GPR25O00155 361 aa11.22□□□□□ -0.61
COPB1-203ENST00000525214 PSME1Q06323 249 aa11.22□□□□□ -0.61
COPB1-203ENST00000525214 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
COPB1-203ENST00000525214 MAFBQ9Y5Q3 323 aaPredicted RBP11.22□□□□□ -0.61
COPB1-203ENST00000525214 H7C1W4 665 aa11.21□□□□□ -0.61
COPB1-203ENST00000525214 PLA2G4AP47712 749 aa11.21□□□□□ -0.61
COPB1-203ENST00000525214 TRIM50Q86XT4 487 aa11.21□□□□□ -0.61
COPB1-203ENST00000525214 GTPBP3Q969Y2 492 aaKnown RBP11.21□□□□□ -0.61
COPB1-203ENST00000525214 MKRN1Q9UHC7 482 aaKnown RBP11.21□□□□□ -0.61
COPB1-203ENST00000525214 PALM3A6NDB9 673 aaPredicted RBP11.2□□□□□ -0.62
COPB1-203ENST00000525214 CDK2AP1O14519 115 aa11.2□□□□□ -0.62
COPB1-203ENST00000525214 MSX1P28360 303 aa11.2□□□□□ -0.62
COPB1-203ENST00000525214 EPHA4P54764 986 aa11.2□□□□□ -0.62
COPB1-203ENST00000525214 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
COPB1-203ENST00000525214 TPCN2Q8NHX9 752 aa11.19□□□□□ -0.62
COPB1-203ENST00000525214 PPP1R12CQ9BZL4 782 aa11.19□□□□□ -0.62
COPB1-203ENST00000525214 NUCKS1Q9H1E3 243 aaKnown RBP11.19□□□□□ -0.62
COPB1-203ENST00000525214 SLURP2P0DP57 97 aa11.18□□□□□ -0.62
COPB1-203ENST00000525214 UBAP2LQ14157 1087 aaKnown RBP11.18□□□□□ -0.62
COPB1-203ENST00000525214 NIFKQ9BYG3 293 aaKnown RBP11.18□□□□□ -0.62
COPB1-203ENST00000525214 RUBCNLQ9H714 662 aa11.18□□□□□ -0.62
COPB1-203ENST00000525214 SCHIP1Q9P0W5 487 aaPredicted RBP11.18□□□□□ -0.62
COPB1-203ENST00000525214 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
COPB1-203ENST00000525214 BACH1O14867 736 aa11.17□□□□□ -0.62
COPB1-203ENST00000525214 DKK1O94907 266 aa11.17□□□□□ -0.62
COPB1-203ENST00000525214 ATP4AP20648 1035 aa11.17□□□□□ -0.62
COPB1-203ENST00000525214 ATP1A2P50993 1020 aa11.17□□□□□ -0.62
COPB1-203ENST00000525214 CCDC102BQ68D86 513 aa11.17□□□□□ -0.62
COPB1-203ENST00000525214 DNAAF2Q9NVR5 837 aaKnown RBP11.17□□□□□ -0.62
COPB1-203ENST00000525214 FOXK2Q01167 660 aa11.16□□□□□ -0.62
COPB1-203ENST00000525214 LARGE2Q8N3Y3 721 aa11.16□□□□□ -0.62
COPB1-203ENST00000525214 TNS4Q8IZW8 715 aa11.15□□□□□ -0.62
COPB1-203ENST00000525214 SIX5Q8N196 739 aa11.15□□□□□ -0.62
COPB1-203ENST00000525214 WHAMMQ8TF30 809 aa11.15□□□□□ -0.62
COPB1-203ENST00000525214 ZNF594Q96JF6 807 aaPredicted RBP11.15□□□□□ -0.62
COPB1-203ENST00000525214 ADAMTS2O95450 1211 aa11.14□□□□□ -0.63
COPB1-203ENST00000525214 ZNF385CQ66K41 422 aaPredicted RBP11.14□□□□□ -0.63
COPB1-203ENST00000525214 FOXR1Q6PIV2 292 aa11.14□□□□□ -0.63
COPB1-203ENST00000525214 ZDHHC1Q8WTX9 485 aa11.14□□□□□ -0.63
COPB1-203ENST00000525214 CRISPLD1Q9H336 500 aa11.14□□□□□ -0.63
COPB1-203ENST00000525214 SRSF11Q05519 484 aaKnown RBP11.13□□□□□ -0.63
COPB1-203ENST00000525214 LBRQ14739 615 aaKnown RBP11.13□□□□□ -0.63
COPB1-203ENST00000525214 KANK4Q5T7N3 995 aaPredicted RBP11.13□□□□□ -0.63
COPB1-203ENST00000525214 MBIPQ9NS73 344 aa11.13□□□□□ -0.63
COPB1-203ENST00000525214 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
COPB1-203ENST00000525214 RASA1P20936 1047 aa11.12□□□□□ -0.63
COPB1-203ENST00000525214 TBCELQ5QJ74 424 aa11.12□□□□□ -0.63
COPB1-203ENST00000525214 SLC9A9Q8IVB4 645 aa11.12□□□□□ -0.63
COPB1-203ENST00000525214 AIDAQ96BJ3 306 aa11.12□□□□□ -0.63
COPB1-203ENST00000525214 TRERF1Q96PN7 1200 aa11.12□□□□□ -0.63
COPB1-203ENST00000525214 PARP3Q9Y6F1 533 aa11.12□□□□□ -0.63
COPB1-203ENST00000525214 FAM181BA6NEQ2 426 aa11.11□□□□□ -0.63
COPB1-203ENST00000525214 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
COPB1-203ENST00000525214 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
COPB1-203ENST00000525214 CFAP70Q5T0N1 1121 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms