RNA–Protein interactions for RNA: ENST00000525116.5

CASP4-205, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-205ENST00000525116 YTHDC2Q9H6S0 1430 aaKnown RBP10.25□□□□□ -0.77
CASP4-205ENST00000525116 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.25□□□□□ -0.77
CASP4-205ENST00000525116 SMAPO00193 183 aa10.25□□□□□ -0.77
CASP4-205ENST00000525116 KRT27Q7Z3Y8 459 aa10.25□□□□□ -0.77
CASP4-205ENST00000525116 RDH13Q8NBN7 331 aa10.25□□□□□ -0.77
CASP4-205ENST00000525116 PMFBP1Q8TBY8 1022 aa10.25□□□□□ -0.77
CASP4-205ENST00000525116 USP32Q8NFA0 1604 aa10.25□□□□□ -0.77
CASP4-205ENST00000525116 SPATA31E1Q6ZUB1 1445 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 RGPD8O14715 1765 aaPredicted RBP10.24□□□□□ -0.77
CASP4-205ENST00000525116 FAM83GA6ND36 823 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 C3orf80F5H4A9 247 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 PBX2P40425 430 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 SLC4A3P48751 1232 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 PSEN2P49810 448 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 EMP3P54852 163 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 CFAP70Q5T0N1 1121 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 PROCA1Q8NCQ7 364 aaPredicted RBP10.24□□□□□ -0.77
CASP4-205ENST00000525116 RABGEF1Q9UJ41 708 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 KIF1AQ12756 1690 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 TNS3Q68CZ2 1445 aa10.24□□□□□ -0.77
CASP4-205ENST00000525116 FAM98CQ17RN3 349 aaKnown RBP10.23□□□□□ -0.77
CASP4-205ENST00000525116 SPIRE2Q8WWL2 714 aa10.23□□□□□ -0.77
CASP4-205ENST00000525116 PRAM1Q96QH2 718 aa10.23□□□□□ -0.77
CASP4-205ENST00000525116 SLC4A5Q9BY07 1137 aa10.23□□□□□ -0.77
CASP4-205ENST00000525116 C14orf93Q9H972 538 aaKnown RBP10.23□□□□□ -0.77
CASP4-205ENST00000525116 PIK3C2GO75747 1445 aa10.23□□□□□ -0.77
CASP4-205ENST00000525116 KNDC1Q76NI1 1749 aa10.22□□□□□ -0.77
CASP4-205ENST00000525116 IFT172Q9UG01 1749 aa10.22□□□□□ -0.77
CASP4-205ENST00000525116 FAM182BQ5T319 152 aa10.22□□□□□ -0.77
CASP4-205ENST00000525116 SIRT1Q96EB6 747 aa10.22□□□□□ -0.77
CASP4-205ENST00000525116 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
CASP4-205ENST00000525116 POGKQ9P215 609 aa10.22□□□□□ -0.77
CASP4-205ENST00000525116 DHX57Q6P158 1386 aaKnown RBP10.22□□□□□ -0.77
CASP4-205ENST00000525116 PLCH1Q4KWH8 1693 aa10.22□□□□□ -0.77
CASP4-205ENST00000525116 BAG6P46379 1132 aa10.21□□□□□ -0.77
CASP4-205ENST00000525116 RIC3Q7Z5B4 369 aa10.21□□□□□ -0.77
CASP4-205ENST00000525116 ARXQ96QS3 562 aa10.21□□□□□ -0.77
CASP4-205ENST00000525116 BTG4Q9NY30 223 aa10.21□□□□□ -0.77
CASP4-205ENST00000525116 SBNO1A3KN83 1393 aa10.21□□□□□ -0.78
CASP4-205ENST00000525116 ARHGEF10O15013 1369 aa10.2□□□□□ -0.78
CASP4-205ENST00000525116 ST18O60284 1047 aa10.2□□□□□ -0.78
CASP4-205ENST00000525116 HIRIP3Q9BW71 556 aaPredicted RBP10.2□□□□□ -0.78
CASP4-205ENST00000525116 NRXN1Q9ULB1 1477 aa10.19□□□□□ -0.78
CASP4-205ENST00000525116 HRCP23327 699 aa10.19□□□□□ -0.78
CASP4-205ENST00000525116 NWD2Q9ULI1 1742 aa10.19□□□□□ -0.78
CASP4-205ENST00000525116 MCM6Q14566 821 aa10.18□□□□□ -0.78
CASP4-205ENST00000525116 TUSC1Q2TAM9 212 aa10.18□□□□□ -0.78
CASP4-205ENST00000525116 NBPF3Q9H094 633 aa10.18□□□□□ -0.78
CASP4-205ENST00000525116 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
CASP4-205ENST00000525116 ABCA3Q99758 1704 aa10.18□□□□□ -0.78
CASP4-205ENST00000525116 SPTLC1O15269 473 aa10.17□□□□□ -0.78
CASP4-205ENST00000525116 KDM4AO75164 1064 aa10.17□□□□□ -0.78
CASP4-205ENST00000525116 GJA5P36382 358 aa10.17□□□□□ -0.78
CASP4-205ENST00000525116 USP46P62068 366 aa10.17□□□□□ -0.78
CASP4-205ENST00000525116 R3HDM1Q15032 1099 aaKnown RBP10.17□□□□□ -0.78
CASP4-205ENST00000525116 SWT1Q5T5J6 900 aaKnown RBP10.17□□□□□ -0.78
CASP4-205ENST00000525116 RSBN1LQ6PCB5 846 aaPredicted RBP10.17□□□□□ -0.78
CASP4-205ENST00000525116 ZNF687Q8N1G0 1237 aa10.17□□□□□ -0.78
CASP4-205ENST00000525116 LIMD1Q9UGP4 676 aa10.17□□□□□ -0.78
CASP4-205ENST00000525116 SEPT9Q9UHD8 586 aaPredicted RBP10.17□□□□□ -0.78
CASP4-205ENST00000525116 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
CASP4-205ENST00000525116 GPRASP1Q5JY77 1395 aa10.16□□□□□ -0.78
CASP4-205ENST00000525116 FAM205CA6NFA0 338 aa10.16□□□□□ -0.78
CASP4-205ENST00000525116 RFC5P40937 340 aa10.16□□□□□ -0.78
CASP4-205ENST00000525116 DMRTA1Q5VZB9 504 aa10.16□□□□□ -0.78
CASP4-205ENST00000525116 NGDNQ8NEJ9 315 aaKnown RBP10.16□□□□□ -0.78
CASP4-205ENST00000525116 MARVELD3Q96A59 401 aa10.16□□□□□ -0.78
CASP4-205ENST00000525116 LRP5O75197 1615 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 SPATA31A5Q5VU36 1347 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 SPATA31A7Q8IWB4 1347 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 PRR36Q9H6K5 1346 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
CASP4-205ENST00000525116 TMEM259Q4ZIN3 620 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 LAPTM4BQ86VI4 370 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 SLF2Q8IX21 1173 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 BANK1Q8NDB2 785 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 VPS9D1Q9Y2B5 631 aa10.15□□□□□ -0.78
CASP4-205ENST00000525116 ANKARQ7Z5J8 1434 aa10.15□□□□□ -0.79
CASP4-205ENST00000525116 NRAPQ86VF7 1730 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 MOXD2PA6NHM9 499 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 SPDYE5A6NIY4 337 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 RAD21O60216 631 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 GCGRP47871 477 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 CHRNA2Q15822 529 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 EZH2Q15910 746 aaKnown RBP10.14□□□□□ -0.79
CASP4-205ENST00000525116 CSPP1Q1MSJ5 1256 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 POTEEQ6S8J3 1075 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 PRDM11Q9NQV5 511 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 STRN4Q9NRL3 753 aa10.14□□□□□ -0.79
CASP4-205ENST00000525116 COL14A1Q05707 1796 aaKnown RBP10.14□□□□□ -0.79
CASP4-205ENST00000525116 TRPM3Q9HCF6 1732 aaPredicted RBP10.13□□□□□ -0.79
CASP4-205ENST00000525116 WASLO00401 505 aaPredicted RBP10.13□□□□□ -0.79
CASP4-205ENST00000525116 TRIM37O94972 964 aa10.13□□□□□ -0.79
CASP4-205ENST00000525116 NUTM2GQ5VZR2 741 aa10.13□□□□□ -0.79
CASP4-205ENST00000525116 PPP2R2DQ66LE6 453 aa10.13□□□□□ -0.79
CASP4-205ENST00000525116 A6NJR5 290 aa10.12□□□□□ -0.79
CASP4-205ENST00000525116 ZC3H6P61129 1189 aaKnown RBP10.12□□□□□ -0.79
CASP4-205ENST00000525116 DCAF11Q8TEB1 546 aa10.12□□□□□ -0.79
CASP4-205ENST00000525116 USP35Q9P2H5 1018 aa10.12□□□□□ -0.79
CASP4-205ENST00000525116 RGPD1P0DJD0 1748 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms