RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 SMIM5Q71RC9 77 aa17.25■□□□□ 0.35
TRAPPC4-205ENST00000525079 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
TRAPPC4-205ENST00000525079 LINC00116Q8NCU8 138 aa17.25■□□□□ 0.35
TRAPPC4-205ENST00000525079 AK7Q96M32 723 aa17.24■□□□□ 0.35
TRAPPC4-205ENST00000525079 SCN11AQ9UI33 1791 aa17.24■□□□□ 0.35
TRAPPC4-205ENST00000525079 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
TRAPPC4-205ENST00000525079 SLC4A9Q96Q91 983 aa17.23■□□□□ 0.35
TRAPPC4-205ENST00000525079 SGIP1Q9BQI5 828 aa17.23■□□□□ 0.35
TRAPPC4-205ENST00000525079 NUDCQ9Y266 331 aa17.23■□□□□ 0.35
TRAPPC4-205ENST00000525079 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
TRAPPC4-205ENST00000525079 PHF14O94880 888 aa17.22■□□□□ 0.35
TRAPPC4-205ENST00000525079 U2AF1L5P0DN76 240 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC4-205ENST00000525079 U2AF1Q01081 240 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAPPC4-205ENST00000525079 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
TRAPPC4-205ENST00000525079 SLC16A10Q8TF71 515 aa17.22■□□□□ 0.35
TRAPPC4-205ENST00000525079 PTCD1O75127 700 aaKnown RBP17.21■□□□□ 0.35
TRAPPC4-205ENST00000525079 PRKAR2BP31323 418 aa17.21■□□□□ 0.35
TRAPPC4-205ENST00000525079 PHACTR3Q96KR7 559 aa17.21■□□□□ 0.35
TRAPPC4-205ENST00000525079 RSPH6AQ9H0K4 717 aa17.21■□□□□ 0.35
TRAPPC4-205ENST00000525079 VIRMAQ69YN4 1812 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-205ENST00000525079 HMGB2P26583 209 aaKnown RBP17.2■□□□□ 0.34
TRAPPC4-205ENST00000525079 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
TRAPPC4-205ENST00000525079 ARXQ96QS3 562 aa17.2■□□□□ 0.34
TRAPPC4-205ENST00000525079 SLC52A2Q9HAB3 445 aa17.2■□□□□ 0.34
TRAPPC4-205ENST00000525079 FHDC1Q9C0D6 1143 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC4-205ENST00000525079 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.18■□□□□ 0.34
TRAPPC4-205ENST00000525079 GNPATO15228 680 aa17.18■□□□□ 0.34
TRAPPC4-205ENST00000525079 POLD1P28340 1107 aa17.18■□□□□ 0.34
TRAPPC4-205ENST00000525079 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
TRAPPC4-205ENST00000525079 GAS2L2Q8NHY3 880 aa17.18■□□□□ 0.34
TRAPPC4-205ENST00000525079 UBR3Q6ZT12 1888 aa17.18■□□□□ 0.34
TRAPPC4-205ENST00000525079 ZEB1P37275 1124 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC4-205ENST00000525079 KLHL34Q8N239 644 aa17.17■□□□□ 0.34
TRAPPC4-205ENST00000525079 FLAD1Q8NFF5 587 aa17.17■□□□□ 0.34
TRAPPC4-205ENST00000525079 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
TRAPPC4-205ENST00000525079 GNAT3A8MTJ3 354 aa17.16■□□□□ 0.34
TRAPPC4-205ENST00000525079 IL17REQ8NFR9 667 aa17.16■□□□□ 0.34
TRAPPC4-205ENST00000525079 SYT17Q9BSW7 474 aa17.16■□□□□ 0.34
TRAPPC4-205ENST00000525079 FCHSD2O94868 740 aa17.15■□□□□ 0.34
TRAPPC4-205ENST00000525079 ADAMTS7Q9UKP4 1686 aa17.15■□□□□ 0.34
TRAPPC4-205ENST00000525079 COL24A1Q17RW2 1714 aa17.15■□□□□ 0.34
TRAPPC4-205ENST00000525079 ZNF831Q5JPB2 1677 aa17.14■□□□□ 0.33
TRAPPC4-205ENST00000525079 MRC1P22897 1456 aa17.14■□□□□ 0.33
TRAPPC4-205ENST00000525079 SSFA2P28290 1259 aa17.14■□□□□ 0.33
TRAPPC4-205ENST00000525079 RALBP1Q15311 655 aa17.14■□□□□ 0.33
TRAPPC4-205ENST00000525079 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC4-205ENST00000525079 RTCBQ9Y3I0 505 aaKnown RBP17.13■□□□□ 0.33
TRAPPC4-205ENST00000525079 TEFQ10587 303 aa17.12■□□□□ 0.33
TRAPPC4-205ENST00000525079 RC3H1Q5TC82 1133 aaKnown RBP17.12■□□□□ 0.33
TRAPPC4-205ENST00000525079 DNAJC10Q8IXB1 793 aa17.12■□□□□ 0.33
TRAPPC4-205ENST00000525079 TJP1Q07157 1748 aa17.12■□□□□ 0.33
TRAPPC4-205ENST00000525079 CRKLP46109 303 aaKnown RBP17.11■□□□□ 0.33
TRAPPC4-205ENST00000525079 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
TRAPPC4-205ENST00000525079 CNTNAP4Q9C0A0 1308 aa17.11■□□□□ 0.33
TRAPPC4-205ENST00000525079 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
TRAPPC4-205ENST00000525079 RPS6KA4O75676 772 aa17.1■□□□□ 0.33
TRAPPC4-205ENST00000525079 MCM10Q7L590 875 aa17.1■□□□□ 0.33
TRAPPC4-205ENST00000525079 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
TRAPPC4-205ENST00000525079 MYH14Q7Z406 1995 aaKnown RBP17.09■□□□□ 0.33
TRAPPC4-205ENST00000525079 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
TRAPPC4-205ENST00000525079 TTC5Q8N0Z6 440 aa17.09■□□□□ 0.33
TRAPPC4-205ENST00000525079 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
TRAPPC4-205ENST00000525079 MYBBP1AQ9BQG0 1328 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-205ENST00000525079 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-205ENST00000525079 RTF1Q92541 710 aaKnown RBP17.08■□□□□ 0.32
TRAPPC4-205ENST00000525079 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC4-205ENST00000525079 CEMIPQ8WUJ3 1361 aa17.07■□□□□ 0.32
TRAPPC4-205ENST00000525079 KCNQ3O43525 872 aa17.07■□□□□ 0.32
TRAPPC4-205ENST00000525079 NEFMP07197 916 aa17.07■□□□□ 0.32
TRAPPC4-205ENST00000525079 RFC4P35249 363 aa17.07■□□□□ 0.32
TRAPPC4-205ENST00000525079 NLGN2Q8NFZ4 835 aa17.07■□□□□ 0.32
TRAPPC4-205ENST00000525079 PLEKHF1Q96S99 279 aa17.07■□□□□ 0.32
TRAPPC4-205ENST00000525079 BTBD11A6QL63 1104 aa17.06■□□□□ 0.32
TRAPPC4-205ENST00000525079 CYP19A1P11511 503 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-205ENST00000525079 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
TRAPPC4-205ENST00000525079 ZNF496Q96IT1 587 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-205ENST00000525079 CCDC87Q9NVE4 849 aa17.06■□□□□ 0.32
TRAPPC4-205ENST00000525079 CICQ96RK0 1608 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC4-205ENST00000525079 UBR2Q8IWV8 1755 aa17.05■□□□□ 0.32
TRAPPC4-205ENST00000525079 ADRA2BP18089 450 aa17.05■□□□□ 0.32
TRAPPC4-205ENST00000525079 SRP68Q9UHB9 627 aaKnown RBP17.05■□□□□ 0.32
TRAPPC4-205ENST00000525079 PELP1Q8IZL8 1130 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-205ENST00000525079 VSIG10Q8N0Z9 540 aa17.04■□□□□ 0.32
TRAPPC4-205ENST00000525079 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
TRAPPC4-205ENST00000525079 MAPK8IP3Q9UPT6 1336 aa17.03■□□□□ 0.32
TRAPPC4-205ENST00000525079 HTATSF1O43719 755 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-205ENST00000525079 MMP10P09238 476 aa17.03■□□□□ 0.32
TRAPPC4-205ENST00000525079 GYS1P13807 737 aa17.03■□□□□ 0.32
TRAPPC4-205ENST00000525079 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-205ENST00000525079 ZBTB1Q9Y2K1 713 aa17.03■□□□□ 0.32
TRAPPC4-205ENST00000525079 DLG5Q8TDM6 1919 aa17.03■□□□□ 0.32
TRAPPC4-205ENST00000525079 CANXP27824 592 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-205ENST00000525079 NFE2L2Q16236 605 aa17.02■□□□□ 0.32
TRAPPC4-205ENST00000525079 GPR162Q16538 588 aa17.02■□□□□ 0.32
TRAPPC4-205ENST00000525079 NLGN1Q8N2Q7 840 aa17.02■□□□□ 0.32
TRAPPC4-205ENST00000525079 PNNQ9H307 717 aaKnown RBP17.02■□□□□ 0.32
TRAPPC4-205ENST00000525079 HEG1Q9ULI3 1381 aa17.02■□□□□ 0.31
TRAPPC4-205ENST00000525079 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
TRAPPC4-205ENST00000525079 FMNL2Q96PY5 1086 aa17.01■□□□□ 0.31
TRAPPC4-205ENST00000525079 THUMPD2Q9BTF0 503 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 333 ms