RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 KNSTRNQ9Y448 316 aa16.18■□□□□ 0.18
CLNS1A-202ENST00000525064 MYH14Q7Z406 1995 aaKnown RBP16.18■□□□□ 0.18
CLNS1A-202ENST00000525064 AK7Q96M32 723 aa16.17■□□□□ 0.18
CLNS1A-202ENST00000525064 ZNF530Q6P9A1 599 aaPredicted RBP16.16■□□□□ 0.18
CLNS1A-202ENST00000525064 C4AP0C0L4 1744 aa16.15■□□□□ 0.18
CLNS1A-202ENST00000525064 IL13P35225 146 aa16.15■□□□□ 0.18
CLNS1A-202ENST00000525064 TJP1Q07157 1748 aa16.15■□□□□ 0.18
CLNS1A-202ENST00000525064 SLC4A9Q96Q91 983 aa16.15■□□□□ 0.18
CLNS1A-202ENST00000525064 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
CLNS1A-202ENST00000525064 GPR162Q16538 588 aa16.14■□□□□ 0.17
CLNS1A-202ENST00000525064 PLEKHO1Q53GL0 409 aaPredicted RBP16.14■□□□□ 0.17
CLNS1A-202ENST00000525064 SULT6B1Q6IMI4 303 aa16.14■□□□□ 0.17
CLNS1A-202ENST00000525064 PELP1Q8IZL8 1130 aaKnown RBP16.14■□□□□ 0.17
CLNS1A-202ENST00000525064 FLAD1Q8NFF5 587 aa16.14■□□□□ 0.17
CLNS1A-202ENST00000525064 ATP6V1AP38606 617 aa16.13■□□□□ 0.17
CLNS1A-202ENST00000525064 ZNF784Q8NCA9 323 aaPredicted RBP16.13■□□□□ 0.17
CLNS1A-202ENST00000525064 KIAA1551Q9HCM1 1747 aa16.12■□□□□ 0.17
CLNS1A-202ENST00000525064 ERVV-2B6SEH9 535 aa16.12■□□□□ 0.17
CLNS1A-202ENST00000525064 PER1O15534 1290 aaPredicted RBP16.12■□□□□ 0.17
CLNS1A-202ENST00000525064 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.175e-7■□□□□ 9.2
CLNS1A-202ENST00000525064 DCAF5Q96JK2 942 aa16.12■□□□□ 0.17
CLNS1A-202ENST00000525064 CICQ96RK0 1608 aaPredicted RBP16.12■□□□□ 0.17
CLNS1A-202ENST00000525064 KIF13BQ9NQT8 1826 aa16.11■□□□□ 0.17
CLNS1A-202ENST00000525064 GNPATO15228 680 aa16.11■□□□□ 0.17
CLNS1A-202ENST00000525064 SSFA2P28290 1259 aa16.11■□□□□ 0.17
CLNS1A-202ENST00000525064 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
CLNS1A-202ENST00000525064 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-202ENST00000525064 ADRA2BP18089 450 aa16.1■□□□□ 0.17
CLNS1A-202ENST00000525064 MTHFSP49914 203 aa16.1■□□□□ 0.17
CLNS1A-202ENST00000525064 CC2D1BQ5T0F9 858 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-202ENST00000525064 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
CLNS1A-202ENST00000525064 ADAMTS7Q9UKP4 1686 aa16.1■□□□□ 0.17
CLNS1A-202ENST00000525064 COL3A1P02461 1466 aaPredicted RBP16.1■□□□□ 0.17
CLNS1A-202ENST00000525064 N4BP2Q86UW6 1770 aaPredicted RBP16.09■□□□□ 0.17
CLNS1A-202ENST00000525064 CABP4P57796 275 aa16.09■□□□□ 0.17
CLNS1A-202ENST00000525064 HMOX1P09601 288 aa16.08■□□□□ 0.16
CLNS1A-202ENST00000525064 HMGB2P26583 209 aaKnown RBP16.08■□□□□ 0.16
CLNS1A-202ENST00000525064 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.16
CLNS1A-202ENST00000525064 C1orf141Q5JVX7 400 aa16.08■□□□□ 0.16
CLNS1A-202ENST00000525064 MRC1P22897 1456 aa16.08■□□□□ 0.16
CLNS1A-202ENST00000525064 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
CLNS1A-202ENST00000525064 NFATC2IPQ8NCF5 419 aa16.06■□□□□ 0.16
CLNS1A-202ENST00000525064 WWC3Q9ULE0 1092 aa16.06■□□□□ 0.16
CLNS1A-202ENST00000525064 CNTNAP4Q9C0A0 1308 aa16.05■□□□□ 0.16
CLNS1A-202ENST00000525064 PTCD1O75127 700 aaKnown RBP16.05■□□□□ 0.16
CLNS1A-202ENST00000525064 BRCA1P38398 1863 aaKnown RBP16.05■□□□□ 0.16
CLNS1A-202ENST00000525064 UBR2Q8IWV8 1755 aa16.05■□□□□ 0.16
CLNS1A-202ENST00000525064 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
CLNS1A-202ENST00000525064 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
CLNS1A-202ENST00000525064 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
CLNS1A-202ENST00000525064 RTCBQ9Y3I0 505 aaKnown RBP16.04■□□□□ 0.16
CLNS1A-202ENST00000525064 SIPA1L3O60292 1781 aaPredicted RBP16.04■□□□□ 0.16
CLNS1A-202ENST00000525064 KCPQ6ZWJ8 1503 aa16.04■□□□□ 0.16
CLNS1A-202ENST00000525064 MMP10P09238 476 aa16.03■□□□□ 0.16
CLNS1A-202ENST00000525064 RC3H1Q5TC82 1133 aaKnown RBP16.03■□□□□ 0.16
CLNS1A-202ENST00000525064 ARHGEF1Q92888 912 aaKnown RBP16.03■□□□□ 0.16
CLNS1A-202ENST00000525064 RNMTO43148 476 aaKnown RBP16.02■□□□□ 0.16
CLNS1A-202ENST00000525064 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
CLNS1A-202ENST00000525064 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.16
CLNS1A-202ENST00000525064 PXDNLA1KZ92 1463 aa16.02■□□□□ 0.15
CLNS1A-202ENST00000525064 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
CLNS1A-202ENST00000525064 CRKLP46109 303 aaKnown RBP16.01■□□□□ 0.15
CLNS1A-202ENST00000525064 TRAPPC3LQ5T215 181 aa16.01■□□□□ 0.15
CLNS1A-202ENST00000525064 SLC52A2Q9HAB3 445 aa16.01■□□□□ 0.15
CLNS1A-202ENST00000525064 GRIN3BO60391 1043 aa16■□□□□ 0.15
CLNS1A-202ENST00000525064 GYS1P13807 737 aa16■□□□□ 0.15
CLNS1A-202ENST00000525064 SLC39A6Q13433 755 aa16■□□□□ 0.15
CLNS1A-202ENST00000525064 C10orf71Q711Q0 1435 aa16■□□□□ 0.15
CLNS1A-202ENST00000525064 SRP68Q9UHB9 627 aaKnown RBP15.99■□□□□ 0.15
CLNS1A-202ENST00000525064 AFDNP55196 1824 aaKnown RBP15.98■□□□□ 0.15
CLNS1A-202ENST00000525064 DNAJC10Q8IXB1 793 aa15.98■□□□□ 0.15
CLNS1A-202ENST00000525064 RFC4P35249 363 aa15.97■□□□□ 0.15
CLNS1A-202ENST00000525064 INTS5Q6P9B9 1019 aaKnown RBP15.97■□□□□ 0.15
CLNS1A-202ENST00000525064 ARFGEF1Q9Y6D6 1849 aa15.96■□□□□ 0.15
CLNS1A-202ENST00000525064 ATP10DQ9P241 1426 aa15.96■□□□□ 0.15
CLNS1A-202ENST00000525064 U2SURPO15042 1029 aaKnown RBP15.96■□□□□ 0.15
CLNS1A-202ENST00000525064 ADCY9O60503 1353 aa15.96■□□□□ 0.15
CLNS1A-202ENST00000525064 USP42Q9H9J4 1324 aaKnown RBP15.95■□□□□ 0.14
CLNS1A-202ENST00000525064 NLGN1Q8N2Q7 840 aa15.95■□□□□ 0.14
CLNS1A-202ENST00000525064 DDR1Q08345 913 aa15.94■□□□□ 0.14
CLNS1A-202ENST00000525064 FKBP8Q14318 412 aa15.94■□□□□ 0.14
CLNS1A-202ENST00000525064 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
CLNS1A-202ENST00000525064 A0A0G2JLW4 131 aa15.93■□□□□ 0.14
CLNS1A-202ENST00000525064 CYP19A1P11511 503 aaPredicted RBP15.93■□□□□ 0.14
CLNS1A-202ENST00000525064 C1QTNF8P60827 252 aa15.93■□□□□ 0.14
CLNS1A-202ENST00000525064 CCDC87Q9NVE4 849 aa15.93■□□□□ 0.14
CLNS1A-202ENST00000525064 NRXN2Q9P2S2 1712 aa15.93■□□□□ 0.14
CLNS1A-202ENST00000525064 GIGYF1O75420 1035 aaPredicted RBP15.92■□□□□ 0.14
CLNS1A-202ENST00000525064 ZBTB1Q9Y2K1 713 aa15.92■□□□□ 0.14
CLNS1A-202ENST00000525064 PARP3Q9Y6F1 533 aa15.92■□□□□ 0.14
CLNS1A-202ENST00000525064 DLG5Q8TDM6 1919 aa15.92■□□□□ 0.14
CLNS1A-202ENST00000525064 COL15A1P39059 1388 aa15.91■□□□□ 0.14
CLNS1A-202ENST00000525064 DPEP1P16444 411 aa15.91■□□□□ 0.14
CLNS1A-202ENST00000525064 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
CLNS1A-202ENST00000525064 IL17REQ8NFR9 667 aa15.91■□□□□ 0.14
CLNS1A-202ENST00000525064 PHACTR3Q96KR7 559 aa15.91■□□□□ 0.14
CLNS1A-202ENST00000525064 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
CLNS1A-202ENST00000525064 SCN7AQ01118 1682 aa15.91■□□□□ 0.14
CLNS1A-202ENST00000525064 DLEC1Q9Y238 1755 aa15.9■□□□□ 0.14
CLNS1A-202ENST00000525064 KCNA3P22001 575 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms