RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 HSP90AB1P08238 724 aaKnown RBP6.07□□□□□ -1.44
CHMP4A-202ENST00000524955 TEFQ10587 303 aa6.07□□□□□ -1.44
CHMP4A-202ENST00000524955 SLC4A9Q96Q91 983 aa6.07□□□□□ -1.44
CHMP4A-202ENST00000524955 ANO8Q9HCE9 1232 aaPredicted RBP6.07□□□□□ -1.44
CHMP4A-202ENST00000524955 TRIM35Q9UPQ4 493 aa6.07□□□□□ -1.44
CHMP4A-202ENST00000524955 EP400Q96L91 3159 aa6.07□□□□□ -1.44
CHMP4A-202ENST00000524955 BCL9O00512 1426 aa6.07□□□□□ -1.44
CHMP4A-202ENST00000524955 PRAMEF22A3QJZ6 481 aa6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 BTBD11A6QL63 1104 aa6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 ERVV-2B6SEH9 535 aa6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 ITPK1Q13572 414 aa6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 R3HDM1Q15032 1099 aaKnown RBP6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 CCDC125Q86Z20 511 aa6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 PDGFDQ9GZP0 370 aaPredicted RBP6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 PNNQ9H307 717 aaKnown RBP6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 CCNL1Q9UK58 526 aaPredicted RBP6.06□□□□□ -1.44
CHMP4A-202ENST00000524955 TNS1Q9HBL0 1735 aaKnown RBP6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 NHSQ6T4R5 1651 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 LOC102724428A0A0B4J2F2 783 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 CCER2I3L3R5 266 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 PLSCR1O15162 318 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 PHF14O94880 888 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 ATP6V1AP38606 617 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 PIP4K2AP48426 406 aaPredicted RBP6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 SIK1P57059 783 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 ZNF827Q17R98 1081 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 KRT24Q2M2I5 525 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 AMIGO3Q86WK7 504 aa6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 ZNF496Q96IT1 587 aaPredicted RBP6.05□□□□□ -1.44
CHMP4A-202ENST00000524955 TAF7Q15545 349 aaPredicted RBP6.04□□□□□ -1.44
CHMP4A-202ENST00000524955 DNAJC10Q8IXB1 793 aa6.04□□□□□ -1.44
CHMP4A-202ENST00000524955 TTC5Q8N0Z6 440 aa6.04□□□□□ -1.44
CHMP4A-202ENST00000524955 LINC00116Q8NCU8 138 aa6.04□□□□□ -1.44
CHMP4A-202ENST00000524955 NECTIN2Q92692 538 aa6.04□□□□□ -1.44
CHMP4A-202ENST00000524955 CEMIPQ8WUJ3 1361 aa6.04□□□□□ -1.44
CHMP4A-202ENST00000524955 BTAF1O14981 1849 aa6.04□□□□□ -1.44
CHMP4A-202ENST00000524955 ELL2O00472 640 aaPredicted RBP6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 MSH5O43196 834 aa6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 HTATSF1O43719 755 aaKnown RBP6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 ZNF790Q6PG37 636 aa6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 WWC1Q8IX03 1113 aa6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 SMARCC1Q92922 1105 aaPredicted RBP6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 TSR2Q969E8 191 aaKnown RBP6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 SPINK5Q9NQ38 1064 aaPredicted RBP6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 TSPYL4Q9UJ04 414 aa6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 ZNF330Q9Y3S2 320 aaPredicted RBP6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 SBF2Q86WG5 1849 aa6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 PLEKHG2Q9H7P9 1386 aa6.03□□□□□ -1.44
CHMP4A-202ENST00000524955 MRC1P22897 1456 aa6.02□□□□□ -1.44
CHMP4A-202ENST00000524955 TCERG1O14776 1098 aaKnown RBP6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 GNPATO15228 680 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 A1BGP04217 495 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 CANXP27824 592 aaKnown RBP6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 CRKLP46109 303 aaKnown RBP6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 LMOD3Q0VAK6 560 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 SLC15A2Q16348 729 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 NBPF14Q5TI25 921 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 MSL1Q68DK7 614 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 NGEFQ8N5V2 710 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 AKT1S1Q96B36 256 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 YTHDC1Q96MU7 727 aaKnown RBP6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 MBIPQ9NS73 344 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 STK32BQ9NY57 414 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 TFCP2L1Q9NZI6 479 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 USP16Q9Y5T5 823 aa6.02□□□□□ -1.45
CHMP4A-202ENST00000524955 KCPQ6ZWJ8 1503 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 ZBTB7AO95365 584 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 ANXA1P04083 346 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 CYP19A1P11511 503 aaPredicted RBP6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 EIF2S2P20042 333 aaKnown RBP6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 EIF4A1P60842 406 aaKnown RBP6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 HNRNPUQ00839 825 aaKnown RBP eCLIP6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 SLC27A3Q5K4L6 730 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 CDCA7LQ96GN5 454 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 AK7Q96M32 723 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 FMNL2Q96PY5 1086 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 ARXQ96QS3 562 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 ATF5Q9Y2D1 282 aaPredicted RBP6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 HEG1Q9ULI3 1381 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 ITGB4P16144 1822 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 ADAMTS7Q9UKP4 1686 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 SCN11AQ9UI33 1791 aa6.01□□□□□ -1.45
CHMP4A-202ENST00000524955 PNPLA7Q6ZV29 1317 aa6□□□□□ -1.45
CHMP4A-202ENST00000524955 CHL1O00533 1208 aa6□□□□□ -1.45
CHMP4A-202ENST00000524955 MYL6BP14649 208 aa6□□□□□ -1.45
CHMP4A-202ENST00000524955 INTS5Q6P9B9 1019 aaKnown RBP6□□□□□ -1.45
CHMP4A-202ENST00000524955 COL23A1Q86Y22 540 aaPredicted RBP6□□□□□ -1.45
CHMP4A-202ENST00000524955 TSPYL6Q8N831 410 aa6□□□□□ -1.45
CHMP4A-202ENST00000524955 C8orf58Q8NAV2 365 aa6□□□□□ -1.45
CHMP4A-202ENST00000524955 ZNF428Q96B54 188 aa6□□□□□ -1.45
CHMP4A-202ENST00000524955 SRP68Q9UHB9 627 aaKnown RBP6□□□□□ -1.45
CHMP4A-202ENST00000524955 ZBTB1Q9Y2K1 713 aa6□□□□□ -1.45
CHMP4A-202ENST00000524955 NUP188Q5SRE5 1749 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 RREB1Q92766 1687 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 GIGYF1O75420 1035 aaPredicted RBP5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 SNRPA1P09661 255 aaKnown RBP5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 ZNF853P0CG23 659 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 GNAI1P63096 354 aa5.99□□□□□ -1.45
CHMP4A-202ENST00000524955 EXOSC9Q06265 439 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms