RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
SWAP70-203ENST00000524817 SLC52A2Q9HAB3 445 aa17.16■□□□□ 0.34
SWAP70-203ENST00000524817 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
SWAP70-203ENST00000524817 BTBD11A6QL63 1104 aa17.15■□□□□ 0.34
SWAP70-203ENST00000524817 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
SWAP70-203ENST00000524817 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
SWAP70-203ENST00000524817 TCERG1O14776 1098 aaKnown RBP17.14■□□□□ 0.33
SWAP70-203ENST00000524817 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
SWAP70-203ENST00000524817 DOT1LQ8TEK3 1739 aa17.14■□□□□ 0.33
SWAP70-203ENST00000524817 TOGARAM1Q9Y4F4 1720 aa17.13■□□□□ 0.33
SWAP70-203ENST00000524817 ATG3Q9NT62 314 aa17.13■□□□□ 0.33
SWAP70-203ENST00000524817 TSPYL4Q9UJ04 414 aa17.13■□□□□ 0.33
SWAP70-203ENST00000524817 EZH2Q15910 746 aaKnown RBP17.12■□□□□ 0.33
SWAP70-203ENST00000524817 TAF7Q15545 349 aaPredicted RBP17.11■□□□□ 0.33
SWAP70-203ENST00000524817 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
SWAP70-203ENST00000524817 ZNF496Q96IT1 587 aaPredicted RBP17.1■□□□□ 0.33
SWAP70-203ENST00000524817 ERVV-2B6SEH9 535 aa17.1■□□□□ 0.33
SWAP70-203ENST00000524817 SF3B2Q13435 895 aaKnown RBP17.1■□□□□ 0.33
SWAP70-203ENST00000524817 BCL11BQ9C0K0 894 aaPredicted RBP17.1■□□□□ 0.33
SWAP70-203ENST00000524817 MBIPQ9NS73 344 aa17.1■□□□□ 0.33
SWAP70-203ENST00000524817 VIRMAQ69YN4 1812 aaKnown RBP17.09■□□□□ 0.33
SWAP70-203ENST00000524817 TTC5Q8N0Z6 440 aa17.09■□□□□ 0.33
SWAP70-203ENST00000524817 SLC4A9Q96Q91 983 aa17.09■□□□□ 0.33
SWAP70-203ENST00000524817 ITGB4P16144 1822 aa17.09■□□□□ 0.33
SWAP70-203ENST00000524817 CEMIPQ8WUJ3 1361 aa17.09■□□□□ 0.33
SWAP70-203ENST00000524817 LMOD3Q0VAK6 560 aa17.09■□□□□ 0.33
SWAP70-203ENST00000524817 ZNF790Q6PG37 636 aa17.09■□□□□ 0.33
SWAP70-203ENST00000524817 PROM2Q8N271 834 aa17.08■□□□□ 0.33
SWAP70-203ENST00000524817 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.33
SWAP70-203ENST00000524817 BCL9O00512 1426 aa17.08■□□□□ 0.32
SWAP70-203ENST00000524817 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
SWAP70-203ENST00000524817 LRRC4BQ9NT99 713 aa17.07■□□□□ 0.32
SWAP70-203ENST00000524817 TSPYL6Q8N831 410 aa17.07■□□□□ 0.32
SWAP70-203ENST00000524817 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
SWAP70-203ENST00000524817 ATP6V1AP38606 617 aa17.07■□□□□ 0.32
SWAP70-203ENST00000524817 PALLDQ8WX93 1383 aa17.06■□□□□ 0.32
SWAP70-203ENST00000524817 SCN11AQ9UI33 1791 aa17.06■□□□□ 0.32
SWAP70-203ENST00000524817 ANXA1P04083 346 aa17.06■□□□□ 0.32
SWAP70-203ENST00000524817 UTRNP46939 3433 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 HTATSF1O43719 755 aaKnown RBP17.05■□□□□ 0.32
SWAP70-203ENST00000524817 GOLGA2Q08379 1002 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 NGEFQ8N5V2 710 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 DNAJC10Q8IXB1 793 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 C8orf58Q8NAV2 365 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 ZNF428Q96B54 188 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 ARXQ96QS3 562 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 CCNL1Q9UK58 526 aaPredicted RBP17.05■□□□□ 0.32
SWAP70-203ENST00000524817 LOC102724428A0A0B4J2F2 783 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 SIK1P57059 783 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
SWAP70-203ENST00000524817 ITPK1Q13572 414 aa17.04■□□□□ 0.32
SWAP70-203ENST00000524817 TXNRD1Q16881 649 aa17.04■□□□□ 0.32
SWAP70-203ENST00000524817 CFAP44Q96MT7 982 aa17.04■□□□□ 0.32
SWAP70-203ENST00000524817 BTAF1O14981 1849 aa17.04■□□□□ 0.32
SWAP70-203ENST00000524817 EXOSC9Q06265 439 aaKnown RBP17.04■□□□□ 0.32
SWAP70-203ENST00000524817 CHL1O00533 1208 aa17.03■□□□□ 0.32
SWAP70-203ENST00000524817 ZNF521Q96K83 1311 aa17.03■□□□□ 0.32
SWAP70-203ENST00000524817 FANCIQ9NVI1 1328 aa17.03■□□□□ 0.32
SWAP70-203ENST00000524817 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.32
SWAP70-203ENST00000524817 BAG6P46379 1132 aa17.02■□□□□ 0.31
SWAP70-203ENST00000524817 EIF4A1P60842 406 aaKnown RBP17.02■□□□□ 0.31
SWAP70-203ENST00000524817 GNAI1P63096 354 aa17.02■□□□□ 0.31
SWAP70-203ENST00000524817 CCDC27Q2M243 656 aa17.02■□□□□ 0.31
SWAP70-203ENST00000524817 A1BGP04217 495 aa17.01■□□□□ 0.31
SWAP70-203ENST00000524817 PHF14O94880 888 aa17.01■□□□□ 0.31
SWAP70-203ENST00000524817 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
SWAP70-203ENST00000524817 IFT57Q9NWB7 429 aa17■□□□□ 0.31
SWAP70-203ENST00000524817 ZNF853P0CG23 659 aa17■□□□□ 0.31
SWAP70-203ENST00000524817 CANXP27824 592 aaKnown RBP17■□□□□ 0.31
SWAP70-203ENST00000524817 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
SWAP70-203ENST00000524817 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
SWAP70-203ENST00000524817 FMNL2Q96PY5 1086 aa16.99■□□□□ 0.31
SWAP70-203ENST00000524817 MYL6BP14649 208 aa16.99■□□□□ 0.31
SWAP70-203ENST00000524817 LINC00116Q8NCU8 138 aa16.99■□□□□ 0.31
SWAP70-203ENST00000524817 CAMKK2Q96RR4 588 aa16.99■□□□□ 0.31
SWAP70-203ENST00000524817 PDGFDQ9GZP0 370 aaPredicted RBP16.99■□□□□ 0.31
SWAP70-203ENST00000524817 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
SWAP70-203ENST00000524817 ZBED9Q6R2W3 1325 aa16.98■□□□□ 0.31
SWAP70-203ENST00000524817 ANO8Q9HCE9 1232 aaPredicted RBP16.98■□□□□ 0.31
SWAP70-203ENST00000524817 PSDA5PKW4 1024 aaPredicted RBP16.98■□□□□ 0.31
SWAP70-203ENST00000524817 NHSQ6T4R5 1651 aa16.98■□□□□ 0.31
SWAP70-203ENST00000524817 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
SWAP70-203ENST00000524817 MSH5O43196 834 aa16.96■□□□□ 0.31
SWAP70-203ENST00000524817 CALD1Q05682 793 aaKnown RBP16.96■□□□□ 0.31
SWAP70-203ENST00000524817 SMARCC1Q92922 1105 aaPredicted RBP16.96■□□□□ 0.31
SWAP70-203ENST00000524817 PROSER3Q2NL68 480 aa16.96■□□□□ 0.31
SWAP70-203ENST00000524817 ZNF827Q17R98 1081 aa16.96■□□□□ 0.3
SWAP70-203ENST00000524817 TWISTNBQ3B726 338 aaPredicted RBP16.96■□□□□ 0.3
SWAP70-203ENST00000524817 ZBTB1Q9Y2K1 713 aa16.96■□□□□ 0.3
SWAP70-203ENST00000524817 E9PSI1 815 aa16.95■□□□□ 0.3
SWAP70-203ENST00000524817 PLSCR1O15162 318 aa16.95■□□□□ 0.3
SWAP70-203ENST00000524817 AIMP1Q12904 312 aaKnown RBP16.95■□□□□ 0.3
SWAP70-203ENST00000524817 MYH16Q9H6N6 1097 aa16.95■□□□□ 0.3
SWAP70-203ENST00000524817 HEG1Q9ULI3 1381 aa16.95■□□□□ 0.3
SWAP70-203ENST00000524817 GNPATO15228 680 aa16.94■□□□□ 0.3
SWAP70-203ENST00000524817 SNRPA1P09661 255 aaKnown RBP16.94■□□□□ 0.3
SWAP70-203ENST00000524817 MRC1P22897 1456 aa16.94■□□□□ 0.3
SWAP70-203ENST00000524817 TNS1Q9HBL0 1735 aaKnown RBP16.94■□□□□ 0.3
SWAP70-203ENST00000524817 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
SWAP70-203ENST00000524817 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 124.3 ms