RNA–Protein interactions for RNA: ENST00000524563.1

NUP98-213, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-213ENST00000524563 TNNT2P45379 298 aaPredicted RBP8.91□□□□□ -0.98
NUP98-213ENST00000524563 GPBP1L1Q9HC44 474 aaPredicted RBP8.91□□□□□ -0.98
NUP98-213ENST00000524563 NCAPD2Q15021 1401 aa8.9□□□□□ -0.98
NUP98-213ENST00000524563 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.9□□□□□ -0.98
NUP98-213ENST00000524563 CYP27B1O15528 508 aa8.9□□□□□ -0.98
NUP98-213ENST00000524563 PER1O15534 1290 aaPredicted RBP8.9□□□□□ -0.98
NUP98-213ENST00000524563 DIEXFQ68CQ4 756 aaKnown RBP8.9□□□□□ -0.98
NUP98-213ENST00000524563 CD2APQ9Y5K6 639 aa8.9□□□□□ -0.98
NUP98-213ENST00000524563 GOLGB1Q14789 3259 aaKnown RBP8.9□□□□□ -0.98
NUP98-213ENST00000524563 UTRNP46939 3433 aa8.9□□□□□ -0.99
NUP98-213ENST00000524563 AFDNP55196 1824 aaKnown RBP8.89□□□□□ -0.99
NUP98-213ENST00000524563 TIAM2Q8IVF5 1701 aa8.89□□□□□ -0.99
NUP98-213ENST00000524563 TNRC6CQ9HCJ0 1690 aaKnown RBP8.89□□□□□ -0.99
NUP98-213ENST00000524563 LOC102724428A0A0B4J2F2 783 aa8.89□□□□□ -0.99
NUP98-213ENST00000524563 SSFA2P28290 1259 aa8.89□□□□□ -0.99
NUP98-213ENST00000524563 SIK1P57059 783 aa8.89□□□□□ -0.99
NUP98-213ENST00000524563 AMER1Q5JTC6 1135 aaPredicted RBP8.89□□□□□ -0.99
NUP98-213ENST00000524563 WDR90Q96KV7 1748 aa8.88□□□□□ -0.99
NUP98-213ENST00000524563 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
NUP98-213ENST00000524563 IFNL2Q8IZJ0 200 aa8.88□□□□□ -0.99
NUP98-213ENST00000524563 LINC00116Q8NCU8 138 aa8.88□□□□□ -0.99
NUP98-213ENST00000524563 PIGBQ92521 554 aa8.88□□□□□ -0.99
NUP98-213ENST00000524563 RBM42Q9BTD8 480 aaKnown RBP8.88□□□□□ -0.99
NUP98-213ENST00000524563 KNSTRNQ9Y448 316 aa8.88□□□□□ -0.99
NUP98-213ENST00000524563 SBF1O95248 1867 aa8.87□□□□□ -0.99
NUP98-213ENST00000524563 DLEC1Q9Y238 1755 aa8.87□□□□□ -0.99
NUP98-213ENST00000524563 ZNF530Q6P9A1 599 aaPredicted RBP8.87□□□□□ -0.99
NUP98-213ENST00000524563 ADCY9O60503 1353 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 KDRP35968 1356 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 NPC1L1Q9UHC9 1359 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 PXDNLA1KZ92 1463 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 HSP90AB1P08238 724 aaKnown RBP8.86□□□□□ -0.99
NUP98-213ENST00000524563 MMP10P09238 476 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 PHKG2P15735 406 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 C1orf141Q5JVX7 400 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 SMIM5Q71RC9 77 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 EYA1Q99502 592 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 RTCBQ9Y3I0 505 aaKnown RBP8.86□□□□□ -0.99
NUP98-213ENST00000524563 C10orf71Q711Q0 1435 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 PLEKHG2Q9H7P9 1386 aa8.86□□□□□ -0.99
NUP98-213ENST00000524563 COL3A1P02461 1466 aaPredicted RBP8.85□□□□□ -0.99
NUP98-213ENST00000524563 CABP4P57796 275 aa8.85□□□□□ -0.99
NUP98-213ENST00000524563 EIF4A2Q14240 407 aaKnown RBP8.85□□□□□ -0.99
NUP98-213ENST00000524563 MORC1Q86VD1 984 aa8.85□□□□□ -0.99
NUP98-213ENST00000524563 PIAS4Q8N2W9 510 aaPredicted RBP8.85□□□□□ -0.99
NUP98-213ENST00000524563 CCDC87Q9NVE4 849 aa8.85□□□□□ -0.99
NUP98-213ENST00000524563 POLKQ9UBT6 870 aa8.85□□□□□ -0.99
NUP98-213ENST00000524563 ASAP1Q9ULH1 1129 aa8.85□□□□□ -0.99
NUP98-213ENST00000524563 KDM6AO15550 1401 aaPredicted RBP8.84□□□□□ -0.99
NUP98-213ENST00000524563 RFC4P35249 363 aa8.84□□□□□ -0.99
NUP98-213ENST00000524563 ITPK1Q13572 414 aa8.84□□□□□ -0.99
NUP98-213ENST00000524563 PLEKHO1Q53GL0 409 aaPredicted RBP8.84□□□□□ -0.99
NUP98-213ENST00000524563 CC2D1BQ5T0F9 858 aaKnown RBP8.84□□□□□ -0.99
NUP98-213ENST00000524563 AMIGO3Q86WK7 504 aa8.84□□□□□ -0.99
NUP98-213ENST00000524563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.84□□□□□ -0.99
NUP98-213ENST00000524563 BCS1LQ9Y276 419 aa8.84□□□□□ -0.99
NUP98-213ENST00000524563 PARP3Q9Y6F1 533 aa8.84□□□□□ -0.99
NUP98-213ENST00000524563 SCN7AQ01118 1682 aa8.84□□□□□ -0.99
NUP98-213ENST00000524563 UBR2Q8IWV8 1755 aa8.84□□□□□ -1
NUP98-213ENST00000524563 NKX1-1Q15270 411 aaPredicted RBP8.83□□□□□ -1
NUP98-213ENST00000524563 CNTNAP4Q9C0A0 1308 aa8.82□□□□□ -1
NUP98-213ENST00000524563 DICER1Q9UPY3 1922 aaKnown RBP8.82□□□□□ -1
NUP98-213ENST00000524563 FCHSD2O94868 740 aa8.82□□□□□ -1
NUP98-213ENST00000524563 CNGB1Q14028 1251 aaPredicted RBP8.82□□□□□ -1
NUP98-213ENST00000524563 TRAPPC3LQ5T215 181 aa8.82□□□□□ -1
NUP98-213ENST00000524563 C16orf71Q8IYS4 520 aaPredicted RBP8.82□□□□□ -1
NUP98-213ENST00000524563 DCAF5Q96JK2 942 aa8.82□□□□□ -1
NUP98-213ENST00000524563 ATG3Q9NT62 314 aa8.82□□□□□ -1
NUP98-213ENST00000524563 ERVV-2B6SEH9 535 aa8.81□□□□□ -1
NUP98-213ENST00000524563 PTCD1O75127 700 aaKnown RBP8.81□□□□□ -1
NUP98-213ENST00000524563 HSPA6P17066 643 aa8.81□□□□□ -1
NUP98-213ENST00000524563 MTHFSP49914 203 aa8.81□□□□□ -1
NUP98-213ENST00000524563 AMOTQ4VCS5 1084 aa8.81□□□□□ -1
NUP98-213ENST00000524563 ARHGAP27Q6ZUM4 889 aa8.81□□□□□ -1
NUP98-213ENST00000524563 DLG5Q8TDM6 1919 aa8.81□□□□□ -1
NUP98-213ENST00000524563 ADAMTS7Q9UKP4 1686 aa8.81□□□□□ -1
NUP98-213ENST00000524563 SIPA1L3O60292 1781 aaPredicted RBP8.81□□□□□ -1
NUP98-213ENST00000524563 BCORQ6W2J9 1755 aa8.81□□□□□ -1
NUP98-213ENST00000524563 CENPBP07199 599 aaPredicted RBP8.8□□□□□ -1
NUP98-213ENST00000524563 NLGN1Q8N2Q7 840 aa8.8□□□□□ -1
NUP98-213ENST00000524563 MRC1P22897 1456 aa8.8□□□□□ -1
NUP98-213ENST00000524563 ARFGEF2Q9Y6D5 1785 aa8.8□□□□□ -1
NUP98-213ENST00000524563 COL11A2P13942 1736 aaPredicted RBP8.8□□□□□ -1
NUP98-213ENST00000524563 ANKRD31Q8N7Z5 1873 aa8.79□□□□□ -1
NUP98-213ENST00000524563 A0A0G2JLW4 131 aa8.79□□□□□ -1
NUP98-213ENST00000524563 CRKLP46109 303 aaKnown RBP8.79□□□□□ -1
NUP98-213ENST00000524563 DDX10Q13206 875 aaKnown RBP8.79□□□□□ -1
NUP98-213ENST00000524563 AEBP1Q8IUX7 1158 aa8.79□□□□□ -1
NUP98-213ENST00000524563 CEP350Q5VT06 3117 aa8.79□□□□□ -1
NUP98-213ENST00000524563 NRXN2Q9P2S2 1712 aa8.79□□□□□ -1
NUP98-213ENST00000524563 KCPQ6ZWJ8 1503 aa8.79□□□□□ -1
NUP98-213ENST00000524563 ZPR1O75312 459 aa8.78□□□□□ -1
NUP98-213ENST00000524563 RPS6KA4O75676 772 aa8.78□□□□□ -1
NUP98-213ENST00000524563 DPEP1P16444 411 aa8.78□□□□□ -1
NUP98-213ENST00000524563 TGFB2P61812 414 aa8.78□□□□□ -1
NUP98-213ENST00000524563 SULT6B1Q6IMI4 303 aa8.78□□□□□ -1
NUP98-213ENST00000524563 ARHGEF1Q92888 912 aaKnown RBP8.78□□□□□ -1
NUP98-213ENST00000524563 SRP68Q9UHB9 627 aaKnown RBP8.78□□□□□ -1
NUP98-213ENST00000524563 USP42Q9H9J4 1324 aaKnown RBP8.78□□□□□ -1
NUP98-213ENST00000524563 COL15A1P39059 1388 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms