RNA–Protein interactions for RNA: ENST00000524538.1

CHID1-206, Transcript of chitinase domain containing 1, humanhuman

TSL 2

Gene CHID1, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-206ENST00000524538 CABP4P57796 275 aa28.79■■■□□ 2.2
CHID1-206ENST00000524538 AKAP4Q5JQC9 854 aa28.79■■■□□ 2.2
CHID1-206ENST00000524538 SSFA2P28290 1259 aa28.78■■■□□ 2.2
CHID1-206ENST00000524538 ATP6V1AP38606 617 aa28.78■■■□□ 2.2
CHID1-206ENST00000524538 UBR3Q6ZT12 1888 aa28.78■■■□□ 2.2
CHID1-206ENST00000524538 LINC00116Q8NCU8 138 aa28.77■■■□□ 2.2
CHID1-206ENST00000524538 COL3A1P02461 1466 aaPredicted RBP28.77■■■□□ 2.2
CHID1-206ENST00000524538 ITPK1Q13572 414 aa28.76■■■□□ 2.19
CHID1-206ENST00000524538 SCN11AQ9UI33 1791 aa28.74■■■□□ 2.19
CHID1-206ENST00000524538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.73■■■□□ 2.19
CHID1-206ENST00000524538 HMOX1P09601 288 aa28.73■■■□□ 2.19
CHID1-206ENST00000524538 NFATC2IPQ8NCF5 419 aa28.72■■■□□ 2.19
CHID1-206ENST00000524538 RC3H1Q5TC82 1133 aaKnown RBP28.71■■■□□ 2.19
CHID1-206ENST00000524538 AMIGO3Q86WK7 504 aa28.7■■■□□ 2.18
CHID1-206ENST00000524538 SLC4A9Q96Q91 983 aa28.7■■■□□ 2.18
CHID1-206ENST00000524538 GNPATO15228 680 aa28.69■■■□□ 2.18
CHID1-206ENST00000524538 CFAP53Q96M91 514 aa28.69■■■□□ 2.18
CHID1-206ENST00000524538 RBM42Q9BTD8 480 aaKnown RBP28.69■■■□□ 2.18
CHID1-206ENST00000524538 UTRNP46939 3433 aa28.69■■■□□ 2.18
CHID1-206ENST00000524538 YY1P25490 414 aa28.68■■■□□ 2.18
CHID1-206ENST00000524538 CNTNAP4Q9C0A0 1308 aa28.68■■■□□ 2.18
CHID1-206ENST00000524538 MRC1P22897 1456 aa28.67■■■□□ 2.18
CHID1-206ENST00000524538 COL5A3P25940 1745 aaPredicted RBP28.67■■■□□ 2.18
CHID1-206ENST00000524538 MTHFSDQ2M296 383 aaKnown RBP28.67■■■□□ 2.18
CHID1-206ENST00000524538 SLC52A2Q9HAB3 445 aa28.67■■■□□ 2.18
CHID1-206ENST00000524538 ADAMTS7Q9UKP4 1686 aa28.67■■■□□ 2.18
CHID1-206ENST00000524538 CICQ96RK0 1608 aaPredicted RBP28.66■■■□□ 2.18
CHID1-206ENST00000524538 PHF14O94880 888 aa28.66■■■□□ 2.18
CHID1-206ENST00000524538 ADRA2BP18089 450 aa28.66■■■□□ 2.18
CHID1-206ENST00000524538 MSL1Q68DK7 614 aa28.66■■■□□ 2.18
CHID1-206ENST00000524538 RNMTO43148 476 aaKnown RBP28.65■■■□□ 2.18
CHID1-206ENST00000524538 CNGB1Q14028 1251 aaPredicted RBP28.65■■■□□ 2.18
CHID1-206ENST00000524538 RTCBQ9Y3I0 505 aaKnown RBP28.65■■■□□ 2.18
CHID1-206ENST00000524538 U2SURPO15042 1029 aaKnown RBP28.64■■■□□ 2.18
CHID1-206ENST00000524538 CD2APQ9Y5K6 639 aa28.64■■■□□ 2.18
CHID1-206ENST00000524538 KLHL34Q8N239 644 aa28.63■■■□□ 2.17
CHID1-206ENST00000524538 LGR6Q9HBX8 967 aa28.63■■■□□ 2.17
CHID1-206ENST00000524538 PPP2R1AP30153 589 aa28.62■■■□□ 2.17
CHID1-206ENST00000524538 TRAPPC3LQ5T215 181 aa28.62■■■□□ 2.17
CHID1-206ENST00000524538 GAS2L2Q8NHY3 880 aa28.62■■■□□ 2.17
CHID1-206ENST00000524538 NUDCQ9Y266 331 aa28.62■■■□□ 2.17
CHID1-206ENST00000524538 GOLGB1Q14789 3259 aaKnown RBP28.61■■■□□ 2.17
CHID1-206ENST00000524538 PTCD1O75127 700 aaKnown RBP28.61■■■□□ 2.17
CHID1-206ENST00000524538 RPS6KA4O75676 772 aa28.61■■■□□ 2.17
CHID1-206ENST00000524538 VIRMAQ69YN4 1812 aaKnown RBP28.59■■■□□ 2.17
CHID1-206ENST00000524538 SMIM5Q71RC9 77 aa28.59■■■□□ 2.17
CHID1-206ENST00000524538 GPR162Q16538 588 aa28.58■■■□□ 2.17
CHID1-206ENST00000524538 NLGN2Q8NFZ4 835 aa28.58■■■□□ 2.17
CHID1-206ENST00000524538 GNAT3A8MTJ3 354 aa28.56■■■□□ 2.16
CHID1-206ENST00000524538 MYH14Q7Z406 1995 aaKnown RBP28.56■■■□□ 2.16
CHID1-206ENST00000524538 NLGN1Q8N2Q7 840 aa28.56■■■□□ 2.16
CHID1-206ENST00000524538 CHD4Q14839 1912 aa28.55■■■□□ 2.16
CHID1-206ENST00000524538 TJP1Q07157 1748 aa28.55■■■□□ 2.16
CHID1-206ENST00000524538 CRKLP46109 303 aaKnown RBP28.55■■■□□ 2.16
CHID1-206ENST00000524538 ARHGEF1Q92888 912 aaKnown RBP28.55■■■□□ 2.16
CHID1-206ENST00000524538 RSPH6AQ9H0K4 717 aa28.55■■■□□ 2.16
CHID1-206ENST00000524538 VSIG10Q8N0Z9 540 aa28.54■■■□□ 2.16
CHID1-206ENST00000524538 RFC4P35249 363 aa28.53■■■□□ 2.16
CHID1-206ENST00000524538 FCHSD2O94868 740 aa28.52■■■□□ 2.16
CHID1-206ENST00000524538 GRIN3BO60391 1043 aa28.51■■■□□ 2.15
CHID1-206ENST00000524538 PRKAR2BP31323 418 aa28.51■■■□□ 2.15
CHID1-206ENST00000524538 KCPQ6ZWJ8 1503 aa28.51■■■□□ 2.15
CHID1-206ENST00000524538 IL17REQ8NFR9 667 aa28.5■■■□□ 2.15
CHID1-206ENST00000524538 U2AF1L5P0DN76 240 aaPredicted RBP28.49■■■□□ 2.15
CHID1-206ENST00000524538 U2AF1Q01081 240 aaKnown RBP eCLIP28.49■■■□□ 2.15
CHID1-206ENST00000524538 TEFQ10587 303 aa28.49■■■□□ 2.15
CHID1-206ENST00000524538 SLC39A6Q13433 755 aa28.49■■■□□ 2.15
CHID1-206ENST00000524538 INTS5Q6P9B9 1019 aaKnown RBP28.49■■■□□ 2.15
CHID1-206ENST00000524538 UBR2Q8IWV8 1755 aa28.49■■■□□ 2.15
CHID1-206ENST00000524538 CEMIPQ8WUJ3 1361 aa28.49■■■□□ 2.15
CHID1-206ENST00000524538 MMP10P09238 476 aa28.48■■■□□ 2.15
CHID1-206ENST00000524538 GYS1P13807 737 aa28.48■■■□□ 2.15
CHID1-206ENST00000524538 PHACTR3Q96KR7 559 aa28.48■■■□□ 2.15
CHID1-206ENST00000524538 CCDC87Q9NVE4 849 aa28.48■■■□□ 2.15
CHID1-206ENST00000524538 C4AP0C0L4 1744 aa28.47■■■□□ 2.15
CHID1-206ENST00000524538 CYP19A1P11511 503 aaPredicted RBP28.47■■■□□ 2.15
CHID1-206ENST00000524538 DNAJC10Q8IXB1 793 aa28.47■■■□□ 2.15
CHID1-206ENST00000524538 TTC5Q8N0Z6 440 aa28.46■■■□□ 2.15
CHID1-206ENST00000524538 SIPA1L3O60292 1781 aaPredicted RBP28.45■■■□□ 2.15
CHID1-206ENST00000524538 PELP1Q8IZL8 1130 aaKnown RBP28.45■■■□□ 2.14
CHID1-206ENST00000524538 YBX3P16989 372 aaKnown RBP eCLIP28.44■■■□□ 2.14
CHID1-206ENST00000524538 USP42Q9H9J4 1324 aaKnown RBP28.43■■■□□ 2.14
CHID1-206ENST00000524538 ZNF790Q6PG37 636 aa28.43■■■□□ 2.14
CHID1-206ENST00000524538 KIF13BQ9NQT8 1826 aa28.43■■■□□ 2.14
CHID1-206ENST00000524538 SOS1Q07889 1333 aaPredicted RBP28.43■■■□□ 2.14
CHID1-206ENST00000524538 TEX13AQ9BXU3 409 aaPredicted RBP28.42■■■□□ 2.14
CHID1-206ENST00000524538 HTATSF1O43719 755 aaKnown RBP28.41■■■□□ 2.14
CHID1-206ENST00000524538 STARD3NLO95772 234 aa28.4■■■□□ 2.14
CHID1-206ENST00000524538 TGFB2P61812 414 aa28.4■■■□□ 2.14
CHID1-206ENST00000524538 PARP3Q9Y6F1 533 aa28.4■■■□□ 2.14
CHID1-206ENST00000524538 C10orf71Q711Q0 1435 aa28.39■■■□□ 2.14
CHID1-206ENST00000524538 ZNF784Q8NCA9 323 aaPredicted RBP28.39■■■□□ 2.14
CHID1-206ENST00000524538 HEG1Q9ULI3 1381 aa28.38■■■□□ 2.13
CHID1-206ENST00000524538 RALBP1Q15311 655 aa28.38■■■□□ 2.13
CHID1-206ENST00000524538 RTF1Q92541 710 aaKnown RBP28.38■■■□□ 2.13
CHID1-206ENST00000524538 ZNF496Q96IT1 587 aaPredicted RBP28.38■■■□□ 2.13
CHID1-206ENST00000524538 ZPR1O75312 459 aa28.37■■■□□ 2.13
CHID1-206ENST00000524538 FMNL2Q96PY5 1086 aa28.36■■■□□ 2.13
CHID1-206ENST00000524538 SRP68Q9UHB9 627 aaKnown RBP28.36■■■□□ 2.13
CHID1-206ENST00000524538 NARFQ9UHQ1 456 aa28.36■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms