RNA–Protein interactions for RNA: ENST00000524460.1

SNX19-203, Transcript of sorting nexin 19, humanhuman

TSL 5

Gene SNX19, Length 796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX19-203ENST00000524460 SCN11AQ9UI33 1791 aa12.46□□□□□ -0.41
SNX19-203ENST00000524460 RNMTO43148 476 aaKnown RBP12.46□□□□□ -0.41
SNX19-203ENST00000524460 TEFQ10587 303 aa12.46□□□□□ -0.41
SNX19-203ENST00000524460 CDCA7Q9BWT1 371 aaPredicted RBP12.46□□□□□ -0.41
SNX19-203ENST00000524460 LGR6Q9HBX8 967 aa12.46□□□□□ -0.41
SNX19-203ENST00000524460 IFT57Q9NWB7 429 aa12.46□□□□□ -0.41
SNX19-203ENST00000524460 TRPC5Q9UL62 973 aaPredicted RBP12.46□□□□□ -0.41
SNX19-203ENST00000524460 GLI3P10071 1580 aa12.46□□□□□ -0.42
SNX19-203ENST00000524460 KDM6AO15550 1401 aaPredicted RBP12.45□□□□□ -0.42
SNX19-203ENST00000524460 EXOC5O00471 708 aa12.45□□□□□ -0.42
SNX19-203ENST00000524460 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
SNX19-203ENST00000524460 DDB1Q16531 1140 aa12.45□□□□□ -0.42
SNX19-203ENST00000524460 BARGINQ6ZT62 677 aa12.45□□□□□ -0.42
SNX19-203ENST00000524460 SPDYE4A6NLX3 237 aa12.44□□□□□ -0.42
SNX19-203ENST00000524460 GJD4Q96KN9 370 aaPredicted RBP12.44□□□□□ -0.42
SNX19-203ENST00000524460 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
SNX19-203ENST00000524460 MBIPQ9NS73 344 aa12.44□□□□□ -0.42
SNX19-203ENST00000524460 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
SNX19-203ENST00000524460 TSPYL4Q9UJ04 414 aa12.44□□□□□ -0.42
SNX19-203ENST00000524460 ADAMTS7Q9UKP4 1686 aa12.44□□□□□ -0.42
SNX19-203ENST00000524460 CEMIPQ8WUJ3 1361 aa12.43□□□□□ -0.42
SNX19-203ENST00000524460 EXOSC9Q06265 439 aaKnown RBP12.43□□□□□ -0.42
SNX19-203ENST00000524460 TRMT2AQ8IZ69 625 aaKnown RBP12.43□□□□□ -0.42
SNX19-203ENST00000524460 DCAF5Q96JK2 942 aa12.43□□□□□ -0.42
SNX19-203ENST00000524460 QTRT2Q9H974 415 aaKnown RBP12.43□□□□□ -0.42
SNX19-203ENST00000524460 SSUH2Q9Y2M2 353 aa12.43□□□□□ -0.42
SNX19-203ENST00000524460 TOGARAM1Q9Y4F4 1720 aa12.42□□□□□ -0.42
SNX19-203ENST00000524460 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
SNX19-203ENST00000524460 ZNF853P0CG23 659 aa12.42□□□□□ -0.42
SNX19-203ENST00000524460 ZNF772Q68DY9 489 aaPredicted RBP12.42□□□□□ -0.42
SNX19-203ENST00000524460 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
SNX19-203ENST00000524460 DOT1LQ8TEK3 1739 aa12.42□□□□□ -0.42
SNX19-203ENST00000524460 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
SNX19-203ENST00000524460 CABP4P57796 275 aa12.41□□□□□ -0.42
SNX19-203ENST00000524460 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
SNX19-203ENST00000524460 RCAN3Q9UKA8 241 aa12.41□□□□□ -0.42
SNX19-203ENST00000524460 MRC1P22897 1456 aa12.4□□□□□ -0.42
SNX19-203ENST00000524460 BTBD11A6QL63 1104 aa12.4□□□□□ -0.42
SNX19-203ENST00000524460 ELL2O00472 640 aaPredicted RBP12.4□□□□□ -0.42
SNX19-203ENST00000524460 CHL1O00533 1208 aa12.4□□□□□ -0.42
SNX19-203ENST00000524460 SLC52A2Q9HAB3 445 aa12.4□□□□□ -0.42
SNX19-203ENST00000524460 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
SNX19-203ENST00000524460 MARCH10Q8NA82 808 aaPredicted RBP12.39□□□□□ -0.43
SNX19-203ENST00000524460 SUPT16HQ9Y5B9 1047 aaKnown RBP12.39□□□□□ -0.43
SNX19-203ENST00000524460 ITGB4P16144 1822 aa12.39□□□□□ -0.43
SNX19-203ENST00000524460 NKX1-1Q15270 411 aaPredicted RBP12.38□□□□□ -0.43
SNX19-203ENST00000524460 SEPT12Q8IYM1 358 aa12.38□□□□□ -0.43
SNX19-203ENST00000524460 NFATC2IPQ8NCF5 419 aa12.38□□□□□ -0.43
SNX19-203ENST00000524460 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
SNX19-203ENST00000524460 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 KCNQ3O43525 872 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 SLC39A6Q13433 755 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 TWISTNBQ3B726 338 aaPredicted RBP12.37□□□□□ -0.43
SNX19-203ENST00000524460 TSPYL6Q8N831 410 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 C8orf58Q8NAV2 365 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 ACSBG1Q96GR2 724 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 BCL2L13Q9BXK5 485 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
SNX19-203ENST00000524460 RBM6P78332 1123 aaKnown RBP12.36□□□□□ -0.43
SNX19-203ENST00000524460 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
SNX19-203ENST00000524460 BABAM1Q9NWV8 329 aa12.36□□□□□ -0.43
SNX19-203ENST00000524460 BRWD3Q6RI45 1802 aa12.36□□□□□ -0.43
SNX19-203ENST00000524460 TCERG1O14776 1098 aaKnown RBP12.35□□□□□ -0.43
SNX19-203ENST00000524460 NEFLP07196 543 aa12.35□□□□□ -0.43
SNX19-203ENST00000524460 FAM182BQ5T319 152 aa12.35□□□□□ -0.43
SNX19-203ENST00000524460 ILDR1Q86SU0 546 aaPredicted RBP12.35□□□□□ -0.43
SNX19-203ENST00000524460 SMC4Q9NTJ3 1288 aa12.35□□□□□ -0.43
SNX19-203ENST00000524460 PAPPAQ13219 1627 aa12.34□□□□□ -0.43
SNX19-203ENST00000524460 CT47B1P0C2W7 299 aaPredicted RBP12.34□□□□□ -0.43
SNX19-203ENST00000524460 CANXP27824 592 aaKnown RBP12.34□□□□□ -0.43
SNX19-203ENST00000524460 RXRBP28702 533 aa12.34□□□□□ -0.43
SNX19-203ENST00000524460 PRIM1P49642 420 aaKnown RBP12.34□□□□□ -0.43
SNX19-203ENST00000524460 REM2Q8IYK8 340 aaPredicted RBP12.34□□□□□ -0.43
SNX19-203ENST00000524460 VAMP4O75379 141 aa12.33□□□□□ -0.44
SNX19-203ENST00000524460 BCAR3O75815 825 aa12.33□□□□□ -0.44
SNX19-203ENST00000524460 RARSP54136 660 aaKnown RBP12.33□□□□□ -0.44
SNX19-203ENST00000524460 RRP1P56182 461 aaKnown RBP12.33□□□□□ -0.44
SNX19-203ENST00000524460 EIF4A1P60842 406 aaKnown RBP12.33□□□□□ -0.44
SNX19-203ENST00000524460 IRX6P78412 446 aaPredicted RBP12.33□□□□□ -0.44
SNX19-203ENST00000524460 ZNF790Q6PG37 636 aa12.33□□□□□ -0.44
SNX19-203ENST00000524460 PIGBQ92521 554 aa12.33□□□□□ -0.44
SNX19-203ENST00000524460 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
SNX19-203ENST00000524460 C5P01031 1676 aa12.32□□□□□ -0.44
SNX19-203ENST00000524460 ONECUT3O60422 494 aaPredicted RBP12.32□□□□□ -0.44
SNX19-203ENST00000524460 FKBP8Q14318 412 aa12.32□□□□□ -0.44
SNX19-203ENST00000524460 POTEAQ6S8J7 498 aa12.32□□□□□ -0.44
SNX19-203ENST00000524460 SSH1Q8WYL5 1049 aa12.32□□□□□ -0.44
SNX19-203ENST00000524460 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
SNX19-203ENST00000524460 RGS17Q9UGC6 210 aaPredicted RBP12.32□□□□□ -0.44
SNX19-203ENST00000524460 UBR2Q8IWV8 1755 aa12.31□□□□□ -0.44
SNX19-203ENST00000524460 BCL9O00512 1426 aa12.31□□□□□ -0.44
SNX19-203ENST00000524460 RGS12O14924 1447 aa12.31□□□□□ -0.44
SNX19-203ENST00000524460 PLIN1O60240 522 aa12.31□□□□□ -0.44
SNX19-203ENST00000524460 EIF2S2P20042 333 aaKnown RBP12.31□□□□□ -0.44
SNX19-203ENST00000524460 KRT27Q7Z3Y8 459 aa12.31□□□□□ -0.44
SNX19-203ENST00000524460 ZNF496Q96IT1 587 aaPredicted RBP12.31□□□□□ -0.44
SNX19-203ENST00000524460 FMNL2Q96PY5 1086 aa12.31□□□□□ -0.44
SNX19-203ENST00000524460 NHSQ6T4R5 1651 aa12.3□□□□□ -0.44
SNX19-203ENST00000524460 KCNQ2O43526 872 aa12.3□□□□□ -0.44
SNX19-203ENST00000524460 PTCD1O75127 700 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms