RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 MEIS3Q99687 375 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 C22orf23Q9BZE7 217 aa17.17■□□□□ 0.34
LDLRAD3-202ENST00000524419 FLIIQ13045 1269 aa17.16■□□□□ 0.34
LDLRAD3-202ENST00000524419 PLEKHO1Q53GL0 409 aaPredicted RBP17.16■□□□□ 0.34
LDLRAD3-202ENST00000524419 PXDNLA1KZ92 1463 aa17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 PLEKHG5O94827 1062 aa17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 ATF3P18847 181 aa17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 F6X3S4 739 aa17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 AMOTQ4VCS5 1084 aa17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 AKAP4Q5JQC9 854 aa17.15■□□□□ 0.34
LDLRAD3-202ENST00000524419 NCOA3Q9Y6Q9 1424 aa17.14■□□□□ 0.33
LDLRAD3-202ENST00000524419 HMMRO75330 724 aa17.14■□□□□ 0.33
LDLRAD3-202ENST00000524419 FKBP5Q13451 457 aaPredicted RBP17.14■□□□□ 0.33
LDLRAD3-202ENST00000524419 TMEM94Q12767 1356 aa17.14■□□□□ 0.33
LDLRAD3-202ENST00000524419 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
LDLRAD3-202ENST00000524419 NECTIN2Q92692 538 aa17.13■□□□□ 0.33
LDLRAD3-202ENST00000524419 FRAT2O75474 233 aaPredicted RBP17.13■□□□□ 0.33
LDLRAD3-202ENST00000524419 HDGFL1Q5TGJ6 251 aa17.13■□□□□ 0.33
LDLRAD3-202ENST00000524419 PXDNQ92626 1479 aa17.12■□□□□ 0.33
LDLRAD3-202ENST00000524419 TEFQ10587 303 aa17.11■□□□□ 0.33
LDLRAD3-202ENST00000524419 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
LDLRAD3-202ENST00000524419 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
LDLRAD3-202ENST00000524419 LGR6Q9HBX8 967 aa17.11■□□□□ 0.33
LDLRAD3-202ENST00000524419 GNAI2P04899 355 aa17.11■□□□□ 0.33
LDLRAD3-202ENST00000524419 HOXB7P09629 217 aa17.11■□□□□ 0.33
LDLRAD3-202ENST00000524419 GNAI3P08754 354 aa17.1■□□□□ 0.33
LDLRAD3-202ENST00000524419 SIPA1L3O60292 1781 aaPredicted RBP17.1■□□□□ 0.33
LDLRAD3-202ENST00000524419 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
LDLRAD3-202ENST00000524419 PLEKHM2Q8IWE5 1019 aa17.09■□□□□ 0.33
LDLRAD3-202ENST00000524419 TBC1D2Q9BYX2 928 aa17.09■□□□□ 0.33
LDLRAD3-202ENST00000524419 ANTXR1Q9H6X2 564 aa17.09■□□□□ 0.33
LDLRAD3-202ENST00000524419 CDC45O75419 566 aa17.08■□□□□ 0.33
LDLRAD3-202ENST00000524419 CRYBG1Q9Y4K1 1723 aa17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 ADAMTS7Q9UKP4 1686 aa17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 BTBD11A6QL63 1104 aa17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 RNMTO43148 476 aaKnown RBP17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 TTC22Q5TAA0 569 aa17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 MPRIPQ6WCQ1 1025 aa17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 TBC1D9Q6ZT07 1266 aa17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.32
LDLRAD3-202ENST00000524419 CADPS2Q86UW7 1296 aa17.07■□□□□ 0.32
LDLRAD3-202ENST00000524419 ABCC6O95255 1503 aa17.07■□□□□ 0.32
LDLRAD3-202ENST00000524419 COL18A1P39060 1754 aa17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 ERBB3P21860 1342 aa17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 NPHP3Q7Z494 1330 aa17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 ZNF335Q9H4Z2 1342 aaPredicted RBP17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 TNS3Q68CZ2 1445 aa17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 ZC3H6P61129 1189 aaKnown RBP17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 XIRP1Q702N8 1843 aaKnown RBP17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 GSPT1P15170 499 aaKnown RBP17.06■□□□□ 0.32
LDLRAD3-202ENST00000524419 APBB1O00213 710 aa17.05■□□□□ 0.32
LDLRAD3-202ENST00000524419 SMARCA5O60264 1052 aaPredicted RBP17.05■□□□□ 0.32
LDLRAD3-202ENST00000524419 EIF2S2P20042 333 aaKnown RBP17.05■□□□□ 0.32
LDLRAD3-202ENST00000524419 C16orf71Q8IYS4 520 aaPredicted RBP17.04■□□□□ 0.32
LDLRAD3-202ENST00000524419 SLKQ9H2G2 1235 aaPredicted RBP17.04■□□□□ 0.32
LDLRAD3-202ENST00000524419 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
LDLRAD3-202ENST00000524419 UBAP1LF5GYI3 381 aa17.04■□□□□ 0.32
LDLRAD3-202ENST00000524419 KCNQ3O43525 872 aa17.04■□□□□ 0.32
LDLRAD3-202ENST00000524419 PHAXQ9H814 394 aaKnown RBP17.04■□□□□ 0.32
LDLRAD3-202ENST00000524419 HSCBQ8IWL3 235 aa17.03■□□□□ 0.32
LDLRAD3-202ENST00000524419 DDX17Q92841 729 aaKnown RBP17.03■□□□□ 0.32
LDLRAD3-202ENST00000524419 CHPF2Q9P2E5 772 aa17.03■□□□□ 0.32
LDLRAD3-202ENST00000524419 OTUD7AQ8TE49 926 aaPredicted RBP17.02■□□□□ 0.32
LDLRAD3-202ENST00000524419 UBTFL1P0CB47 393 aaPredicted RBP17.02■□□□□ 0.31
LDLRAD3-202ENST00000524419 ATP8B2P98198 1209 aa17.02■□□□□ 0.31
LDLRAD3-202ENST00000524419 RAPGEF4Q8WZA2 1011 aa17.02■□□□□ 0.31
LDLRAD3-202ENST00000524419 LRRFIP2Q9Y608 721 aaKnown RBP17.02■□□□□ 0.31
LDLRAD3-202ENST00000524419 SRCIN1Q9C0H9 1055 aa17.01■□□□□ 0.31
LDLRAD3-202ENST00000524419 NLRP2Q9NX02 1062 aa17.01■□□□□ 0.31
LDLRAD3-202ENST00000524419 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
LDLRAD3-202ENST00000524419 CASC1Q6TDU7 716 aa17■□□□□ 0.31
LDLRAD3-202ENST00000524419 USP44Q9H0E7 712 aa17■□□□□ 0.31
LDLRAD3-202ENST00000524419 EXOC6BQ9Y2D4 811 aa17■□□□□ 0.31
LDLRAD3-202ENST00000524419 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
LDLRAD3-202ENST00000524419 TUBGCP6Q96RT7 1819 aa16.99■□□□□ 0.31
LDLRAD3-202ENST00000524419 DNAAF4Q8WXU2 420 aa16.99■□□□□ 0.31
LDLRAD3-202ENST00000524419 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
LDLRAD3-202ENST00000524419 PNMA6EA0A0J9YXQ4 647 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 SNX21Q969T3 373 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 LRRCC1Q9C099 1032 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 SPG7Q9UQ90 795 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 SPATA31A3Q5VYP0 1347 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 IBTKQ9P2D0 1353 aaPredicted RBP16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 PKD1L3Q7Z443 1732 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 CSB-PGBD3P0DP91 1061 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 SDSP20132 328 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 OSBPL3Q9H4L5 887 aa16.98■□□□□ 0.31
LDLRAD3-202ENST00000524419 MEGF6O75095 1541 aa16.97■□□□□ 0.31
LDLRAD3-202ENST00000524419 GIGYF1O75420 1035 aaPredicted RBP16.97■□□□□ 0.31
LDLRAD3-202ENST00000524419 PI4KAP2A4QPH2 592 aa16.97■□□□□ 0.31
LDLRAD3-202ENST00000524419 PI4KAP1Q8N8J0 262 aa16.97■□□□□ 0.31
LDLRAD3-202ENST00000524419 CABLES1Q8TDN4 633 aa16.97■□□□□ 0.31
LDLRAD3-202ENST00000524419 CHMP5Q9NZZ3 219 aa16.97■□□□□ 0.31
LDLRAD3-202ENST00000524419 ADCY9O60503 1353 aa16.96■□□□□ 0.31
LDLRAD3-202ENST00000524419 CPDO75976 1380 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms