RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 RC3H1Q5TC82 1133 aaKnown RBP16.15■□□□□ 0.18
SPARC-206ENST00000524277 PHF14O94880 888 aa16.14■□□□□ 0.17
SPARC-206ENST00000524277 C1orf141Q5JVX7 400 aa16.14■□□□□ 0.17
SPARC-206ENST00000524277 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
SPARC-206ENST00000524277 GNPATO15228 680 aa16.13■□□□□ 0.17
SPARC-206ENST00000524277 ADRA2BP18089 450 aa16.13■□□□□ 0.17
SPARC-206ENST00000524277 MTHFSP49914 203 aa16.13■□□□□ 0.17
SPARC-206ENST00000524277 CABP4P57796 275 aa16.13■□□□□ 0.17
SPARC-206ENST00000524277 ITPK1Q13572 414 aa16.13■□□□□ 0.17
SPARC-206ENST00000524277 RTCBQ9Y3I0 505 aaKnown RBP16.13■□□□□ 0.17
SPARC-206ENST00000524277 YBX3P16989 372 aaKnown RBP eCLIP16.12■□□□□ 0.17
SPARC-206ENST00000524277 TRAPPC3LQ5T215 181 aa16.12■□□□□ 0.17
SPARC-206ENST00000524277 UBR3Q6ZT12 1888 aa16.12■□□□□ 0.17
SPARC-206ENST00000524277 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
SPARC-206ENST00000524277 AMIGO3Q86WK7 504 aa16.11■□□□□ 0.17
SPARC-206ENST00000524277 NLGN1Q8N2Q7 840 aa16.11■□□□□ 0.17
SPARC-206ENST00000524277 GOLGB1Q14789 3259 aaKnown RBP16.11■□□□□ 0.17
SPARC-206ENST00000524277 KDRP35968 1356 aa16.11■□□□□ 0.17
SPARC-206ENST00000524277 IL13P35225 146 aa16.1■□□□□ 0.17
SPARC-206ENST00000524277 C1QTNF8P60827 252 aa16.1■□□□□ 0.17
SPARC-206ENST00000524277 SULT6B1Q6IMI4 303 aa16.1■□□□□ 0.17
SPARC-206ENST00000524277 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
SPARC-206ENST00000524277 CNTNAP4Q9C0A0 1308 aa16.1■□□□□ 0.17
SPARC-206ENST00000524277 ZNF831Q5JPB2 1677 aa16.09■□□□□ 0.17
SPARC-206ENST00000524277 GIGYF1O75420 1035 aaPredicted RBP16.08■□□□□ 0.16
SPARC-206ENST00000524277 RPS6KA4O75676 772 aa16.08■□□□□ 0.16
SPARC-206ENST00000524277 AEBP1Q8IUX7 1158 aa16.08■□□□□ 0.16
SPARC-206ENST00000524277 KIF7Q2M1P5 1343 aa16.08■□□□□ 0.16
SPARC-206ENST00000524277 AKAP4Q5JQC9 854 aa16.07■□□□□ 0.16
SPARC-206ENST00000524277 NFATC2IPQ8NCF5 419 aa16.07■□□□□ 0.16
SPARC-206ENST00000524277 SLC4A9Q96Q91 983 aa16.07■□□□□ 0.16
SPARC-206ENST00000524277 KDM6AO15550 1401 aaPredicted RBP16.07■□□□□ 0.16
SPARC-206ENST00000524277 MMP10P09238 476 aa16.06■□□□□ 0.16
SPARC-206ENST00000524277 RFC4P35249 363 aa16.06■□□□□ 0.16
SPARC-206ENST00000524277 TGFB2P61812 414 aa16.06■□□□□ 0.16
SPARC-206ENST00000524277 SMIM5Q71RC9 77 aa16.06■□□□□ 0.16
SPARC-206ENST00000524277 ARHGEF1Q92888 912 aaKnown RBP16.06■□□□□ 0.16
SPARC-206ENST00000524277 PER1O15534 1290 aaPredicted RBP16.05■□□□□ 0.16
SPARC-206ENST00000524277 CCDC87Q9NVE4 849 aa16.04■□□□□ 0.16
SPARC-206ENST00000524277 NPC1L1Q9UHC9 1359 aa16.03■□□□□ 0.16
SPARC-206ENST00000524277 PTCD1O75127 700 aaKnown RBP16.03■□□□□ 0.16
SPARC-206ENST00000524277 DIAPH1O60610 1272 aaKnown RBP16.02■□□□□ 0.16
SPARC-206ENST00000524277 GYS1P13807 737 aa16.02■□□□□ 0.16
SPARC-206ENST00000524277 SLC52A2Q9HAB3 445 aa16.02■□□□□ 0.16
SPARC-206ENST00000524277 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.16
SPARC-206ENST00000524277 SENP3-EIF4A1A0A087X0R7 540 aa16.01■□□□□ 0.15
SPARC-206ENST00000524277 CRKLP46109 303 aaKnown RBP16.01■□□□□ 0.15
SPARC-206ENST00000524277 GPBP1L1Q9HC44 474 aaPredicted RBP16■□□□□ 0.15
SPARC-206ENST00000524277 ATP10DQ9P241 1426 aa16■□□□□ 0.15
SPARC-206ENST00000524277 RNMTO43148 476 aaKnown RBP15.99■□□□□ 0.15
SPARC-206ENST00000524277 CC2D1BQ5T0F9 858 aaKnown RBP15.99■□□□□ 0.15
SPARC-206ENST00000524277 COL5A3P25940 1745 aaPredicted RBP15.99■□□□□ 0.15
SPARC-206ENST00000524277 HMOX1P09601 288 aa15.98■□□□□ 0.15
SPARC-206ENST00000524277 VSIG10Q8N0Z9 540 aa15.98■□□□□ 0.15
SPARC-206ENST00000524277 ADCY9O60503 1353 aa15.98■□□□□ 0.15
SPARC-206ENST00000524277 C10orf71Q711Q0 1435 aa15.97■□□□□ 0.15
SPARC-206ENST00000524277 LGR6Q9HBX8 967 aa15.97■□□□□ 0.15
SPARC-206ENST00000524277 PXDNLA1KZ92 1463 aa15.97■□□□□ 0.15
SPARC-206ENST00000524277 USP42Q9H9J4 1324 aaKnown RBP15.96■□□□□ 0.15
SPARC-206ENST00000524277 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
SPARC-206ENST00000524277 ZPR1O75312 459 aa15.96■□□□□ 0.15
SPARC-206ENST00000524277 MTHFSDQ2M296 383 aaKnown RBP15.96■□□□□ 0.15
SPARC-206ENST00000524277 INTS5Q6P9B9 1019 aaKnown RBP15.96■□□□□ 0.15
SPARC-206ENST00000524277 CICQ96RK0 1608 aaPredicted RBP15.96■□□□□ 0.15
SPARC-206ENST00000524277 KIF13BQ9NQT8 1826 aa15.96■□□□□ 0.14
SPARC-206ENST00000524277 MYH14Q7Z406 1995 aaKnown RBP15.95■□□□□ 0.14
SPARC-206ENST00000524277 A0A0G2JLW4 131 aa15.95■□□□□ 0.14
SPARC-206ENST00000524277 GAS2L2Q8NHY3 880 aa15.95■□□□□ 0.14
SPARC-206ENST00000524277 BCS1LQ9Y276 419 aa15.95■□□□□ 0.14
SPARC-206ENST00000524277 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
SPARC-206ENST00000524277 DPEP1P16444 411 aa15.94■□□□□ 0.14
SPARC-206ENST00000524277 DNAJC10Q8IXB1 793 aa15.94■□□□□ 0.14
SPARC-206ENST00000524277 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
SPARC-206ENST00000524277 MRC1P22897 1456 aa15.94■□□□□ 0.14
SPARC-206ENST00000524277 C4AP0C0L4 1744 aa15.94■□□□□ 0.14
SPARC-206ENST00000524277 FCHSD2O94868 740 aa15.93■□□□□ 0.14
SPARC-206ENST00000524277 TM4SF1P30408 202 aa15.93■□□□□ 0.14
SPARC-206ENST00000524277 FKBP8Q14318 412 aa15.93■□□□□ 0.14
SPARC-206ENST00000524277 TTC5Q8N0Z6 440 aa15.93■□□□□ 0.14
SPARC-206ENST00000524277 TEX13AQ9BXU3 409 aaPredicted RBP15.93■□□□□ 0.14
SPARC-206ENST00000524277 WWC3Q9ULE0 1092 aa15.93■□□□□ 0.14
SPARC-206ENST00000524277 SOS1Q07889 1333 aaPredicted RBP15.93■□□□□ 0.14
SPARC-206ENST00000524277 U2SURPO15042 1029 aaKnown RBP15.92■□□□□ 0.14
SPARC-206ENST00000524277 STARD3NLO95772 234 aa15.92■□□□□ 0.14
SPARC-206ENST00000524277 SLC39A6Q13433 755 aa15.92■□□□□ 0.14
SPARC-206ENST00000524277 CFAP53Q96M91 514 aa15.92■□□□□ 0.14
SPARC-206ENST00000524277 SRP68Q9UHB9 627 aaKnown RBP15.92■□□□□ 0.14
SPARC-206ENST00000524277 NARFQ9UHQ1 456 aa15.92■□□□□ 0.14
SPARC-206ENST00000524277 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
SPARC-206ENST00000524277 TEFQ10587 303 aa15.91■□□□□ 0.14
SPARC-206ENST00000524277 ARHGAP27Q6ZUM4 889 aa15.91■□□□□ 0.14
SPARC-206ENST00000524277 NUDCQ9Y266 331 aa15.91■□□□□ 0.14
SPARC-206ENST00000524277 A0A087WZG4 1122 aa15.9■□□□□ 0.14
SPARC-206ENST00000524277 POLRMTO00411 1230 aaKnown RBP15.9■□□□□ 0.14
SPARC-206ENST00000524277 KCNA3P22001 575 aa15.9■□□□□ 0.14
SPARC-206ENST00000524277 DDR1Q08345 913 aa15.9■□□□□ 0.14
SPARC-206ENST00000524277 DALRD3Q5D0E6 543 aaKnown RBP15.9■□□□□ 0.14
SPARC-206ENST00000524277 USPL1Q5W0Q7 1092 aa15.9■□□□□ 0.14
SPARC-206ENST00000524277 TJP1Q07157 1748 aa15.9■□□□□ 0.14
SPARC-206ENST00000524277 ZNF526Q8TF50 670 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms