RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 ASAP1Q9ULH1 1129 aa22.08■■□□□ 1.13
CSGALNACT1-216ENST00000524213 C4BP0C0L5 1744 aa22.07■■□□□ 1.12
CSGALNACT1-216ENST00000524213 ADAMTS7Q9UKP4 1686 aa22.06■■□□□ 1.12
CSGALNACT1-216ENST00000524213 ATG3Q9NT62 314 aa22.05■■□□□ 1.12
CSGALNACT1-216ENST00000524213 TFCP2L1Q9NZI6 479 aa22.05■■□□□ 1.12
CSGALNACT1-216ENST00000524213 PNPLA7Q6ZV29 1317 aa22.05■■□□□ 1.12
CSGALNACT1-216ENST00000524213 CABP4P57796 275 aa22.04■■□□□ 1.12
CSGALNACT1-216ENST00000524213 WDR43Q15061 677 aaKnown RBP eCLIP22.04■■□□□ 1.12
CSGALNACT1-216ENST00000524213 ATF5Q9Y2D1 282 aaPredicted RBP22.04■■□□□ 1.12
CSGALNACT1-216ENST00000524213 UBR3Q6ZT12 1888 aa22.04■■□□□ 1.12
CSGALNACT1-216ENST00000524213 LOC102724428A0A0B4J2F2 783 aa22.03■■□□□ 1.12
CSGALNACT1-216ENST00000524213 SIK1P57059 783 aa22.03■■□□□ 1.12
CSGALNACT1-216ENST00000524213 ZNF831Q5JPB2 1677 aa22.03■■□□□ 1.12
CSGALNACT1-216ENST00000524213 HMGB2P26583 209 aaKnown RBP22.02■■□□□ 1.12
CSGALNACT1-216ENST00000524213 COL24A1Q17RW2 1714 aa22.02■■□□□ 1.12
CSGALNACT1-216ENST00000524213 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
CSGALNACT1-216ENST00000524213 GNAT3A8MTJ3 354 aa22.01■■□□□ 1.11
CSGALNACT1-216ENST00000524213 PHACTR3Q96KR7 559 aa22.01■■□□□ 1.11
CSGALNACT1-216ENST00000524213 MTFR1LQ9H019 292 aa22.01■■□□□ 1.11
CSGALNACT1-216ENST00000524213 LGR6Q9HBX8 967 aa22.01■■□□□ 1.11
CSGALNACT1-216ENST00000524213 MRC1P22897 1456 aa22.01■■□□□ 1.11
CSGALNACT1-216ENST00000524213 MAP3K5Q99683 1374 aa22■■□□□ 1.11
CSGALNACT1-216ENST00000524213 RNMTO43148 476 aaKnown RBP22■■□□□ 1.11
CSGALNACT1-216ENST00000524213 PTGER2P43116 358 aa22■■□□□ 1.11
CSGALNACT1-216ENST00000524213 NFATC2IPQ8NCF5 419 aa22■■□□□ 1.11
CSGALNACT1-216ENST00000524213 MAPK8IP3Q9UPT6 1336 aa22■■□□□ 1.11
CSGALNACT1-216ENST00000524213 ITPK1Q13572 414 aa21.99■■□□□ 1.11
CSGALNACT1-216ENST00000524213 PLEKHF1Q96S99 279 aa21.99■■□□□ 1.11
CSGALNACT1-216ENST00000524213 PPP1R1BQ9UD71 204 aaPredicted RBP21.99■■□□□ 1.11
CSGALNACT1-216ENST00000524213 ATP6V1AP38606 617 aa21.98■■□□□ 1.11
CSGALNACT1-216ENST00000524213 LINC00116Q8NCU8 138 aa21.98■■□□□ 1.11
CSGALNACT1-216ENST00000524213 SIPA1L3O60292 1781 aaPredicted RBP21.97■■□□□ 1.11
CSGALNACT1-216ENST00000524213 COL23A1Q86Y22 540 aaPredicted RBP21.97■■□□□ 1.11
CSGALNACT1-216ENST00000524213 SLC4A9Q96Q91 983 aa21.97■■□□□ 1.11
CSGALNACT1-216ENST00000524213 SGIP1Q9BQI5 828 aa21.97■■□□□ 1.11
CSGALNACT1-216ENST00000524213 RBM42Q9BTD8 480 aaKnown RBP21.97■■□□□ 1.11
CSGALNACT1-216ENST00000524213 SLC52A2Q9HAB3 445 aa21.97■■□□□ 1.11
CSGALNACT1-216ENST00000524213 HTATSF1O43719 755 aaKnown RBP21.96■■□□□ 1.11
CSGALNACT1-216ENST00000524213 SLC16A10Q8TF71 515 aa21.96■■□□□ 1.11
CSGALNACT1-216ENST00000524213 RTF1Q92541 710 aaKnown RBP21.96■■□□□ 1.11
CSGALNACT1-216ENST00000524213 AK7Q96M32 723 aa21.96■■□□□ 1.11
CSGALNACT1-216ENST00000524213 TJP1Q07157 1748 aa21.96■■□□□ 1.11
CSGALNACT1-216ENST00000524213 CICQ96RK0 1608 aaPredicted RBP21.95■■□□□ 1.1
CSGALNACT1-216ENST00000524213 MSH5O43196 834 aa21.94■■□□□ 1.1
CSGALNACT1-216ENST00000524213 AMIGO3Q86WK7 504 aa21.94■■□□□ 1.1
CSGALNACT1-216ENST00000524213 MYH14Q7Z406 1995 aaKnown RBP21.94■■□□□ 1.1
CSGALNACT1-216ENST00000524213 PTCD1O75127 700 aaKnown RBP21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 TEFQ10587 303 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 NFE2L2Q16236 605 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 SMIM5Q71RC9 77 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 UBR2Q8IWV8 1755 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 DLG5Q8TDM6 1919 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 RUNDC1Q96C34 613 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 MRS2Q9HD23 443 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 ADAMTS8Q9UP79 889 aa21.93■■□□□ 1.1
CSGALNACT1-216ENST00000524213 IL17REQ8NFR9 667 aa21.92■■□□□ 1.1
CSGALNACT1-216ENST00000524213 CEMIPQ8WUJ3 1361 aa21.9■■□□□ 1.1
CSGALNACT1-216ENST00000524213 PHF14O94880 888 aa21.9■■□□□ 1.1
CSGALNACT1-216ENST00000524213 SLC39A6Q13433 755 aa21.9■■□□□ 1.1
CSGALNACT1-216ENST00000524213 FLAD1Q8NFF5 587 aa21.9■■□□□ 1.1
CSGALNACT1-216ENST00000524213 KCPQ6ZWJ8 1503 aa21.9■■□□□ 1.1
CSGALNACT1-216ENST00000524213 GNPATO15228 680 aa21.89■■□□□ 1.09
CSGALNACT1-216ENST00000524213 CCDC184Q52MB2 194 aa21.89■■□□□ 1.09
CSGALNACT1-216ENST00000524213 ARXQ96QS3 562 aa21.89■■□□□ 1.09
CSGALNACT1-216ENST00000524213 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.88■■□□□ 1.09
CSGALNACT1-216ENST00000524213 SSFA2P28290 1259 aa21.88■■□□□ 1.09
CSGALNACT1-216ENST00000524213 LMOD3Q0VAK6 560 aa21.88■■□□□ 1.09
CSGALNACT1-216ENST00000524213 C4AP0C0L4 1744 aa21.87■■□□□ 1.09
CSGALNACT1-216ENST00000524213 MSL1Q68DK7 614 aa21.87■■□□□ 1.09
CSGALNACT1-216ENST00000524213 CCDC146Q8IYE0 955 aa21.87■■□□□ 1.09
CSGALNACT1-216ENST00000524213 POLD1P28340 1107 aa21.86■■□□□ 1.09
CSGALNACT1-216ENST00000524213 TMPOP42166 694 aaKnown RBP21.86■■□□□ 1.09
CSGALNACT1-216ENST00000524213 CNTNAP4Q9C0A0 1308 aa21.85■■□□□ 1.09
CSGALNACT1-216ENST00000524213 RIPK4P57078 832 aa21.85■■□□□ 1.09
CSGALNACT1-216ENST00000524213 RC3H1Q5TC82 1133 aaKnown RBP21.85■■□□□ 1.09
CSGALNACT1-216ENST00000524213 MCM10Q7L590 875 aa21.85■■□□□ 1.09
CSGALNACT1-216ENST00000524213 TTC5Q8N0Z6 440 aa21.85■■□□□ 1.09
CSGALNACT1-216ENST00000524213 PNISRQ8TF01 805 aaKnown RBP21.85■■□□□ 1.09
CSGALNACT1-216ENST00000524213 FHDC1Q9C0D6 1143 aaPredicted RBP21.85■■□□□ 1.09
CSGALNACT1-216ENST00000524213 DCTN1Q14203 1278 aa21.83■■□□□ 1.09
CSGALNACT1-216ENST00000524213 DNAJC10Q8IXB1 793 aa21.83■■□□□ 1.09
CSGALNACT1-216ENST00000524213 RTCBQ9Y3I0 505 aaKnown RBP21.83■■□□□ 1.09
CSGALNACT1-216ENST00000524213 BTBD11A6QL63 1104 aa21.82■■□□□ 1.08
CSGALNACT1-216ENST00000524213 CRKLP46109 303 aaKnown RBP21.82■■□□□ 1.08
CSGALNACT1-216ENST00000524213 SYT17Q9BSW7 474 aa21.82■■□□□ 1.08
CSGALNACT1-216ENST00000524213 RPS6KA4O75676 772 aa21.81■■□□□ 1.08
CSGALNACT1-216ENST00000524213 TAF7Q15545 349 aaPredicted RBP21.81■■□□□ 1.08
CSGALNACT1-216ENST00000524213 DIEXFQ68CQ4 756 aaKnown RBP21.81■■□□□ 1.08
CSGALNACT1-216ENST00000524213 ZNF790Q6PG37 636 aa21.8■■□□□ 1.08
CSGALNACT1-216ENST00000524213 NEUROD2Q15784 382 aa21.79■■□□□ 1.08
CSGALNACT1-216ENST00000524213 TRAPPC3LQ5T215 181 aa21.79■■□□□ 1.08
CSGALNACT1-216ENST00000524213 VSIG10Q8N0Z9 540 aa21.79■■□□□ 1.08
CSGALNACT1-216ENST00000524213 KLHL34Q8N239 644 aa21.79■■□□□ 1.08
CSGALNACT1-216ENST00000524213 INTS5Q6P9B9 1019 aaKnown RBP21.78■■□□□ 1.08
CSGALNACT1-216ENST00000524213 ARHGEF1Q92888 912 aaKnown RBP21.78■■□□□ 1.08
CSGALNACT1-216ENST00000524213 ZNF496Q96IT1 587 aaPredicted RBP21.78■■□□□ 1.08
CSGALNACT1-216ENST00000524213 RRP7AQ9Y3A4 280 aaKnown RBP21.78■■□□□ 1.08
CSGALNACT1-216ENST00000524213 CCER2I3L3R5 266 aa21.77■■□□□ 1.08
CSGALNACT1-216ENST00000524213 APAF1O14727 1248 aa21.77■■□□□ 1.08
CSGALNACT1-216ENST00000524213 CYP19A1P11511 503 aaPredicted RBP21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms