RNA–Protein interactions for RNA: ENST00000524177.5

CSMD1-214, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-214ENST00000524177 BCRP11274 1271 aa6.21□□□□□ -1.42
CSMD1-214ENST00000524177 DBN1Q16643 649 aa6.21□□□□□ -1.42
CSMD1-214ENST00000524177 PODNQ7Z5L7 613 aa6.21□□□□□ -1.42
CSMD1-214ENST00000524177 BEND7Q8N7W2 519 aaPredicted RBP6.21□□□□□ -1.42
CSMD1-214ENST00000524177 ACDQ96AP0 544 aa6.21□□□□□ -1.42
CSMD1-214ENST00000524177 ESPNB1AK53 854 aa6.2□□□□□ -1.42
CSMD1-214ENST00000524177 PROCP04070 461 aa6.2□□□□□ -1.42
CSMD1-214ENST00000524177 FBXO45P0C2W1 286 aa6.2□□□□□ -1.42
CSMD1-214ENST00000524177 NR1H3Q13133 447 aa6.2□□□□□ -1.42
CSMD1-214ENST00000524177 FOXR1Q6PIV2 292 aa6.2□□□□□ -1.42
CSMD1-214ENST00000524177 AEBP1Q8IUX7 1158 aa6.2□□□□□ -1.42
CSMD1-214ENST00000524177 GMCL1Q96IK5 515 aa6.2□□□□□ -1.42
CSMD1-214ENST00000524177 MAFBQ9Y5Q3 323 aaPredicted RBP6.2□□□□□ -1.42
CSMD1-214ENST00000524177 ATP5J2-PTCD1G3V325 749 aa6.19□□□□□ -1.42
CSMD1-214ENST00000524177 MEN1O00255 615 aa6.19□□□□□ -1.42
CSMD1-214ENST00000524177 LMOD1P29536 600 aaPredicted RBP6.19□□□□□ -1.42
CSMD1-214ENST00000524177 TBC1D9Q6ZT07 1266 aa6.19□□□□□ -1.42
CSMD1-214ENST00000524177 GALNT6Q8NCL4 622 aa6.19□□□□□ -1.42
CSMD1-214ENST00000524177 GTPBP3Q969Y2 492 aaKnown RBP6.19□□□□□ -1.42
CSMD1-214ENST00000524177 GAS2L1Q99501 681 aaPredicted RBP6.19□□□□□ -1.42
CSMD1-214ENST00000524177 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
CSMD1-214ENST00000524177 USTQ9Y2C2 406 aa6.19□□□□□ -1.42
CSMD1-214ENST00000524177 CCDC9Q9Y3X0 531 aaKnown RBP6.19□□□□□ -1.42
CSMD1-214ENST00000524177 SEMA3FQ13275 785 aa6.18□□□□□ -1.42
CSMD1-214ENST00000524177 PNMA1Q8ND90 353 aa6.18□□□□□ -1.42
CSMD1-214ENST00000524177 ACIN1Q9UKV3 1341 aaKnown RBP6.18□□□□□ -1.42
CSMD1-214ENST00000524177 CARNS1A5YM72 827 aa6.17□□□□□ -1.42
CSMD1-214ENST00000524177 ZBBXA8MT70 800 aa6.17□□□□□ -1.42
CSMD1-214ENST00000524177 PIK3CDO00329 1044 aa6.17□□□□□ -1.42
CSMD1-214ENST00000524177 EIF4G2P78344 907 aaKnown RBP eCLIP6.17□□□□□ -1.42
CSMD1-214ENST00000524177 POU4F2Q12837 409 aa6.17□□□□□ -1.42
CSMD1-214ENST00000524177 SEPT12Q8IYM1 358 aa6.17□□□□□ -1.42
CSMD1-214ENST00000524177 TRERF1Q96PN7 1200 aa6.17□□□□□ -1.42
CSMD1-214ENST00000524177 DYRK1BQ9Y463 629 aa6.17□□□□□ -1.42
CSMD1-214ENST00000524177 A0A1W2PRU2 124 aa6.16□□□□□ -1.42
CSMD1-214ENST00000524177 H7C1W4 665 aa6.16□□□□□ -1.42
CSMD1-214ENST00000524177 ATP9BO43861 1147 aa6.16□□□□□ -1.42
CSMD1-214ENST00000524177 ATG7O95352 703 aa6.16□□□□□ -1.42
CSMD1-214ENST00000524177 MX2P20592 715 aa6.16□□□□□ -1.42
CSMD1-214ENST00000524177 GPC1P35052 558 aa6.16□□□□□ -1.42
CSMD1-214ENST00000524177 TMEM88BA6NKF7 163 aa6.15□□□□□ -1.42
CSMD1-214ENST00000524177 GIGYF1O75420 1035 aaPredicted RBP6.15□□□□□ -1.42
CSMD1-214ENST00000524177 CSB-PGBD3P0DP91 1061 aa6.15□□□□□ -1.42
CSMD1-214ENST00000524177 PDE4CQ08493 712 aa6.15□□□□□ -1.42
CSMD1-214ENST00000524177 SLC27A3Q5K4L6 730 aa6.15□□□□□ -1.42
CSMD1-214ENST00000524177 K7ELQ4 463 aaPredicted RBP6.14□□□□□ -1.43
CSMD1-214ENST00000524177 OIP5O43482 229 aa6.14□□□□□ -1.43
CSMD1-214ENST00000524177 SNRPNP63162 240 aaKnown RBP6.14□□□□□ -1.43
CSMD1-214ENST00000524177 CDCA8Q53HL2 280 aa6.14□□□□□ -1.43
CSMD1-214ENST00000524177 BRD1O95696 1058 aa6.13□□□□□ -1.43
CSMD1-214ENST00000524177 NBPF10Q6P3W6 841 aaKnown RBP6.13□□□□□ -1.43
CSMD1-214ENST00000524177 NBPF15Q8N660 670 aa6.13□□□□□ -1.43
CSMD1-214ENST00000524177 TRIM52Q96A61 297 aa6.13□□□□□ -1.43
CSMD1-214ENST00000524177 NLRP3Q96P20 1036 aa6.13□□□□□ -1.43
CSMD1-214ENST00000524177 NUCKS1Q9H1E3 243 aaKnown RBP6.13□□□□□ -1.43
CSMD1-214ENST00000524177 LRRC4BQ9NT99 713 aa6.13□□□□□ -1.43
CSMD1-214ENST00000524177 ZMIZ1Q9ULJ6 1067 aa6.13□□□□□ -1.43
CSMD1-214ENST00000524177 NSFL1CQ9UNZ2 370 aaKnown RBP6.13□□□□□ -1.43
CSMD1-214ENST00000524177 PCDHB9Q9Y5E1 797 aa6.13□□□□□ -1.43
CSMD1-214ENST00000524177 KRBA1A5PL33 1030 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 USP17L3A6NCW0 530 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 USP17L4A6NCW7 530 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 USP17L5A8MUK1 530 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 SHISA8B8ZZ34 492 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 BAG6P46379 1132 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 ERVK-9P63128 1117 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 KCNA1Q09470 495 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 KANK4Q5T7N3 995 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-214ENST00000524177 CC2D2BQ6DHV5 1058 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 USP17L2Q6R6M4 530 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 USP17L1Q7RTZ2 530 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 NPM2Q86SE8 214 aaKnown RBP6.12□□□□□ -1.43
CSMD1-214ENST00000524177 NFATC2IPQ8NCF5 419 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 OXCT2Q9BYC2 517 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-214ENST00000524177 GRIP2Q9C0E4 1043 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 GZF1Q9H116 711 aaPredicted RBP6.12□□□□□ -1.43
CSMD1-214ENST00000524177 TIMMDC1Q9NPL8 285 aa6.12□□□□□ -1.43
CSMD1-214ENST00000524177 C1orf229Q6ZS94 237 aaPredicted RBP6.11□□□□□ -1.43
CSMD1-214ENST00000524177 PLEKHM2Q8IWE5 1019 aa6.11□□□□□ -1.43
CSMD1-214ENST00000524177 SPATA31C2B4DYI2 1134 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 WASLO00401 505 aaPredicted RBP6.1□□□□□ -1.43
CSMD1-214ENST00000524177 F11P03951 625 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 THBS1P07996 1170 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 FURINP09958 794 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 MAP2K3P46734 347 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 SCTRP47872 440 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 CLN3Q13286 438 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 ELOAQ14241 798 aaKnown RBP6.1□□□□□ -1.43
CSMD1-214ENST00000524177 TMCO4Q5TGY1 634 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 TAS1R3Q7RTX0 852 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 ARHGEF10LQ9HCE6 1279 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 MKL2Q9ULH7 1088 aa6.1□□□□□ -1.43
CSMD1-214ENST00000524177 PATL2C9JE40 543 aaKnown RBP6.09□□□□□ -1.43
CSMD1-214ENST00000524177 SKIP12755 728 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 COL8A1P27658 744 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 CYP2U1Q7Z449 544 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 DEPDC4Q8N2C3 294 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 Q8N3U1 123 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 STK32AQ8WU08 396 aa6.09□□□□□ -1.43
CSMD1-214ENST00000524177 KLRG1Q96E93 195 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms